RNA–Protein interactions for RNA: ENST00000479446.5

ABCA2-217, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 6,295 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-217ENST00000479446 CCDC61Q9Y6R9 512 aa23.15■■□□□ 1.3
ABCA2-217ENST00000479446 BTBD11A6QL63 1104 aa23.15■■□□□ 1.3
ABCA2-217ENST00000479446 FKBP4Q02790 459 aaKnown RBP eCLIP23.14■■□□□ 1.3
ABCA2-217ENST00000479446 ZSCAN30Q86W11 494 aa23.14■■□□□ 1.3
ABCA2-217ENST00000479446 UQCRHLA0A096LP55 91 aa23.14■■□□□ 1.3
ABCA2-217ENST00000479446 UQCRHP07919 91 aa23.14■■□□□ 1.3
ABCA2-217ENST00000479446 KRT18P05783 430 aaKnown RBP23.14■■□□□ 1.29
ABCA2-217ENST00000479446 MX1P20591 662 aa23.14■■□□□ 1.29
ABCA2-217ENST00000479446 KIF1BPQ96EK5 621 aa23.14■■□□□ 1.29
ABCA2-217ENST00000479446 STRN4Q9NRL3 753 aa23.13■■□□□ 1.29
ABCA2-217ENST00000479446 NOL7Q9UMY1 257 aaKnown RBP23.13■■□□□ 1.29
ABCA2-217ENST00000479446 NESP48681 1621 aa23.13■■□□□ 1.29
ABCA2-217ENST00000479446 LEKR1Q6ZMV7 388 aa23.13■■□□□ 1.29
ABCA2-217ENST00000479446 CASTP20810 708 aaKnown RBP23.12■■□□□ 1.29
ABCA2-217ENST00000479446 CCDC141Q6ZP82 1450 aa23.12■■□□□ 1.29
ABCA2-217ENST00000479446 CDK13Q14004 1512 aaKnown RBP23.12■■□□□ 1.29
ABCA2-217ENST00000479446 GNAT3A8MTJ3 354 aa23.12■■□□□ 1.29
ABCA2-217ENST00000479446 RDXP35241 583 aaKnown RBP23.12■■□□□ 1.29
ABCA2-217ENST00000479446 AXDND1Q5T1B0 1012 aaPredicted RBP23.12■■□□□ 1.29
ABCA2-217ENST00000479446 DUSP27Q5VZP5 1158 aa23.12■■□□□ 1.29
ABCA2-217ENST00000479446 LUC7LQ9NQ29 371 aaKnown RBP23.12■■□□□ 1.29
ABCA2-217ENST00000479446 MAP3K11Q16584 847 aa23.12■■□□□ 1.29
ABCA2-217ENST00000479446 NUTM1Q86Y26 1132 aa23.12■■□□□ 1.29
ABCA2-217ENST00000479446 THUMPD2Q9BTF0 503 aaKnown RBP23.12■■□□□ 1.29
ABCA2-217ENST00000479446 UPF3BQ9BZI7 483 aaKnown RBP23.12■■□□□ 1.29
ABCA2-217ENST00000479446 SYCE3A1L190 88 aa23.12■■□□□ 1.29
ABCA2-217ENST00000479446 GLRX3O76003 335 aaKnown RBP23.12■■□□□ 1.29
ABCA2-217ENST00000479446 NUDT16Q96DE0 195 aaKnown RBP23.11■■□□□ 1.29
ABCA2-217ENST00000479446 RAB11FIP3O75154 756 aa23.11■■□□□ 1.29
ABCA2-217ENST00000479446 NUP133Q8WUM0 1156 aa23.11■■□□□ 1.29
ABCA2-217ENST00000479446 MPHOSPH8Q99549 860 aa23.11■■□□□ 1.29
ABCA2-217ENST00000479446 FILIP1Q7Z7B0 1213 aa23.1■■□□□ 1.29
ABCA2-217ENST00000479446 TOM1L2Q6ZVM7 507 aa23.1■■□□□ 1.29
ABCA2-217ENST00000479446 LRPPRCP42704 1394 aaKnown RBP23.1■■□□□ 1.29
ABCA2-217ENST00000479446 SNAPC4Q5SXM2 1469 aa23.09■■□□□ 1.29
ABCA2-217ENST00000479446 ERLIN1O75477 346 aa23.09■■□□□ 1.29
ABCA2-217ENST00000479446 SLC26A8Q96RN1 970 aa23.09■■□□□ 1.29
ABCA2-217ENST00000479446 SMTNL1A8MU46 457 aa23.09■■□□□ 1.29
ABCA2-217ENST00000479446 TXLNBQ8N3L3 684 aa23.08■■□□□ 1.29
ABCA2-217ENST00000479446 DDX54Q8TDD1 881 aaKnown RBP23.08■■□□□ 1.29
ABCA2-217ENST00000479446 DEF6Q9H4E7 631 aa23.08■■□□□ 1.28
ABCA2-217ENST00000479446 RAPGEF3O95398 923 aa23.07■■□□□ 1.28
ABCA2-217ENST00000479446 SYCP1Q15431 976 aa23.07■■□□□ 1.28
ABCA2-217ENST00000479446 MCM10Q7L590 875 aa23.07■■□□□ 1.28
ABCA2-217ENST00000479446 UBAC1Q9BSL1 405 aa23.07■■□□□ 1.28
ABCA2-217ENST00000479446 NCOA1Q15788 1441 aa23.07■■□□□ 1.28
ABCA2-217ENST00000479446 KIAA0586Q9BVV6 1533 aa23.07■■□□□ 1.28
ABCA2-217ENST00000479446 SKAP1Q86WV1 359 aa23.07■■□□□ 1.28
ABCA2-217ENST00000479446 STK11IPQ8N1F8 1099 aa23.07■■□□□ 1.28
ABCA2-217ENST00000479446 CCDC191Q8NCU4 936 aa23.07■■□□□ 1.28
ABCA2-217ENST00000479446 WASF1Q92558 559 aa23.06■■□□□ 1.28
ABCA2-217ENST00000479446 FAM177A1Q8N128 213 aaPredicted RBP23.06■■□□□ 1.28
ABCA2-217ENST00000479446 SOGA3Q5TF21 947 aa23.06■■□□□ 1.28
ABCA2-217ENST00000479446 SMARCA5O60264 1052 aaPredicted RBP23.06■■□□□ 1.28
ABCA2-217ENST00000479446 CCDC83Q8IWF9 413 aa23.05■■□□□ 1.28
ABCA2-217ENST00000479446 MIS18AQ9NYP9 233 aa23.05■■□□□ 1.28
ABCA2-217ENST00000479446 HMGXB3Q12766 1538 aa23.05■■□□□ 1.28
ABCA2-217ENST00000479446 TDO2P48775 406 aa23.05■■□□□ 1.28
ABCA2-217ENST00000479446 DDX11Q96FC9 970 aa23.05■■□□□ 1.28
ABCA2-217ENST00000479446 TBC1D2Q9BYX2 928 aa23.05■■□□□ 1.28
ABCA2-217ENST00000479446 FERMT3Q86UX7 667 aa23.05■■□□□ 1.28
ABCA2-217ENST00000479446 IMMTQ16891 758 aaKnown RBP23.05■■□□□ 1.28
ABCA2-217ENST00000479446 RRP9O43818 475 aaKnown RBP23.05■■□□□ 1.28
ABCA2-217ENST00000479446 EIF3JO75822 258 aaKnown RBP23.05■■□□□ 1.28
ABCA2-217ENST00000479446 CCDC181Q5TID7 509 aa23.05■■□□□ 1.28
ABCA2-217ENST00000479446 ABCC5O15440 1437 aa23.04■■□□□ 1.28
ABCA2-217ENST00000479446 ERLIN2O94905 339 aa23.04■■□□□ 1.28
ABCA2-217ENST00000479446 TSPYL1Q9H0U9 437 aa23.04■■□□□ 1.28
ABCA2-217ENST00000479446 PRPF40BQ6NWY9 871 aaKnown RBP23.04■■□□□ 1.28
ABCA2-217ENST00000479446 SCAND2PQ9GZW5 306 aaPredicted RBP23.04■■□□□ 1.28
ABCA2-217ENST00000479446 SH2B1Q9NRF2 756 aaPredicted RBP23.04■■□□□ 1.28
ABCA2-217ENST00000479446 PCF11O94913 1555 aaKnown RBP23.04■■□□□ 1.28
ABCA2-217ENST00000479446 PLEKHH1Q9ULM0 1364 aa23.03■■□□□ 1.28
ABCA2-217ENST00000479446 SKIDA1Q1XH10 827 aa23.03■■□□□ 1.28
ABCA2-217ENST00000479446 CCDC183Q5T5S1 534 aa23.03■■□□□ 1.28
ABCA2-217ENST00000479446 U3KPZ7 1027 aaPredicted RBP23.03■■□□□ 1.28
ABCA2-217ENST00000479446 CAMSAP2Q08AD1 1489 aa23.02■■□□□ 1.28
ABCA2-217ENST00000479446 DNMBPQ6XZF7 1577 aa23.02■■□□□ 1.28
ABCA2-217ENST00000479446 TANGO6Q9C0B7 1094 aa23.02■■□□□ 1.28
ABCA2-217ENST00000479446 MAP3K1Q13233 1512 aa23.02■■□□□ 1.28
ABCA2-217ENST00000479446 GOLGA6L10A6NI86 522 aa23.02■■□□□ 1.28
ABCA2-217ENST00000479446 PTPN23Q9H3S7 1636 aa23.01■■□□□ 1.27
ABCA2-217ENST00000479446 ARHGEF11O15085 1522 aa23.01■■□□□ 1.27
ABCA2-217ENST00000479446 ATP2B2Q01814 1243 aa23.01■■□□□ 1.27
ABCA2-217ENST00000479446 KCNH5Q8NCM2 988 aa23.01■■□□□ 1.27
ABCA2-217ENST00000479446 TRIM27P14373 513 aa23■■□□□ 1.27
ABCA2-217ENST00000479446 MAGI1Q96QZ7 1491 aaPredicted RBP23■■□□□ 1.27
ABCA2-217ENST00000479446 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23■■□□□ 1.273e-6■■■■■ 82.1
ABCA2-217ENST00000479446 KIF2AO00139 706 aaPredicted RBP23■■□□□ 1.27
ABCA2-217ENST00000479446 PRDM11Q9NQV5 511 aa23■■□□□ 1.27
ABCA2-217ENST00000479446 CAMK4Q16566 473 aa23■■□□□ 1.27
ABCA2-217ENST00000479446 LARP1Q6PKG0 1096 aaKnown RBP23■■□□□ 1.27
ABCA2-217ENST00000479446 IDH1O75874 414 aaKnown RBP23■■□□□ 1.27
ABCA2-217ENST00000479446 TAF7Q15545 349 aaPredicted RBP23■■□□□ 1.27
ABCA2-217ENST00000479446 ZHX3Q9H4I2 956 aa23■■□□□ 1.27
ABCA2-217ENST00000479446 CFAP100Q494V2 611 aa22.99■■□□□ 1.27
ABCA2-217ENST00000479446 ANKLE2Q86XL3 938 aa22.99■■□□□ 1.27
ABCA2-217ENST00000479446 TNPO1Q92973 898 aaKnown RBP22.99■■□□□ 1.27
ABCA2-217ENST00000479446 SSFA2P28290 1259 aa22.99■■□□□ 1.27
ABCA2-217ENST00000479446 BMP2KQ9NSY1 1161 aaPredicted RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms