RNA–Protein interactions for RNA: ENST00000479424.5

ITSN1-228, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 647 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-228ENST00000479424 MAP3K5Q99683 1374 aa12.12□□□□□ -0.47
ITSN1-228ENST00000479424 TAF1LQ8IZX4 1826 aa12.11□□□□□ -0.47
ITSN1-228ENST00000479424 PRIM1P49642 420 aaKnown RBP12.11□□□□□ -0.47
ITSN1-228ENST00000479424 ARXQ96QS3 562 aa12.11□□□□□ -0.47
ITSN1-228ENST00000479424 PNPLA7Q6ZV29 1317 aa12.11□□□□□ -0.47
ITSN1-228ENST00000479424 ITGB4P16144 1822 aa12.1□□□□□ -0.47
ITSN1-228ENST00000479424 FYB1O15117 783 aa12.1□□□□□ -0.47
ITSN1-228ENST00000479424 RRS1Q15050 365 aaKnown RBP12.1□□□□□ -0.47
ITSN1-228ENST00000479424 SLC27A3Q5K4L6 730 aa12.1□□□□□ -0.47
ITSN1-228ENST00000479424 NBPF6Q5VWK0 638 aa12.1□□□□□ -0.47
ITSN1-228ENST00000479424 NBPF4Q96M43 638 aa12.1□□□□□ -0.47
ITSN1-228ENST00000479424 ZNF784Q8NCA9 323 aaPredicted RBP12.09□□□□□ -0.47
ITSN1-228ENST00000479424 RTL1A6NKG5 1358 aa12.08□□□□□ -0.48
ITSN1-228ENST00000479424 AMPHP49418 695 aa12.08□□□□□ -0.48
ITSN1-228ENST00000479424 ZCRB1Q8TBF4 217 aaKnown RBP12.08□□□□□ -0.48
ITSN1-228ENST00000479424 GGNBP2Q9H3C7 697 aa12.08□□□□□ -0.48
ITSN1-228ENST00000479424 TOGARAM1Q9Y4F4 1720 aa12.08□□□□□ -0.48
ITSN1-228ENST00000479424 C5P01031 1676 aa12.07□□□□□ -0.48
ITSN1-228ENST00000479424 MAP2P11137 1827 aaKnown RBP12.07□□□□□ -0.48
ITSN1-228ENST00000479424 USHBP1Q8N6Y0 703 aa12.07□□□□□ -0.48
ITSN1-228ENST00000479424 SLC16A10Q8TF71 515 aa12.07□□□□□ -0.48
ITSN1-228ENST00000479424 SYTL4Q96C24 671 aaPredicted RBP12.07□□□□□ -0.48
ITSN1-228ENST00000479424 USP47Q96K76 1375 aa12.06□□□□□ -0.48
ITSN1-228ENST00000479424 SLC24A1O60721 1099 aa12.06□□□□□ -0.48
ITSN1-228ENST00000479424 PKD1L3Q7Z443 1732 aa12.06□□□□□ -0.48
ITSN1-228ENST00000479424 ANKRD26Q9UPS8 1709 aa12.06□□□□□ -0.48
ITSN1-228ENST00000479424 TMF1P82094 1093 aa12.05□□□□□ -0.48
ITSN1-228ENST00000479424 HSP90AB2PQ58FF8 381 aa12.05□□□□□ -0.48
ITSN1-228ENST00000479424 TFCP2L1Q9NZI6 479 aa12.05□□□□□ -0.48
ITSN1-228ENST00000479424 CEP350Q5VT06 3117 aa12.05□□□□□ -0.48
ITSN1-228ENST00000479424 INSRP06213 1382 aa12.05□□□□□ -0.48
ITSN1-228ENST00000479424 CARD14Q9BXL6 1004 aa12.04□□□□□ -0.48
ITSN1-228ENST00000479424 CCNL1Q9UK58 526 aaPredicted RBP12.04□□□□□ -0.48
ITSN1-228ENST00000479424 CGNL1Q0VF96 1302 aa12.04□□□□□ -0.48
ITSN1-228ENST00000479424 UBR3Q6ZT12 1888 aa12.04□□□□□ -0.48
ITSN1-228ENST00000479424 COL23A1Q86Y22 540 aaPredicted RBP12.03□□□□□ -0.48
ITSN1-228ENST00000479424 NLGN2Q8NFZ4 835 aa12.03□□□□□ -0.48
ITSN1-228ENST00000479424 NCAPD2Q15021 1401 aa12.03□□□□□ -0.48
ITSN1-228ENST00000479424 CYP27B1O15528 508 aa12.02□□□□□ -0.49
ITSN1-228ENST00000479424 POLD1P28340 1107 aa12.02□□□□□ -0.49
ITSN1-228ENST00000479424 FLT4P35916 1363 aa12.02□□□□□ -0.49
ITSN1-228ENST00000479424 KIF24Q5T7B8 1368 aa12.02□□□□□ -0.49
ITSN1-228ENST00000479424 C4BP0C0L5 1744 aa12.01□□□□□ -0.49
ITSN1-228ENST00000479424 GPR162Q16538 588 aa12.01□□□□□ -0.49
ITSN1-228ENST00000479424 RAPGEF4Q8WZA2 1011 aa12.01□□□□□ -0.49
ITSN1-228ENST00000479424 SMG6Q86US8 1419 aaKnown RBP12.01□□□□□ -0.49
ITSN1-228ENST00000479424 TATP17735 454 aaPredicted RBP12□□□□□ -0.49
ITSN1-228ENST00000479424 AMIGO3Q86WK7 504 aa12□□□□□ -0.49
ITSN1-228ENST00000479424 KLHL34Q8N239 644 aa12□□□□□ -0.49
ITSN1-228ENST00000479424 EMILIN1Q9Y6C2 1016 aa12□□□□□ -0.49
ITSN1-228ENST00000479424 PCDH11XQ9BZA7 1347 aa12□□□□□ -0.49
ITSN1-228ENST00000479424 PCDH11YQ9BZA8 1340 aa12□□□□□ -0.49
ITSN1-228ENST00000479424 NSD3Q9BZ95 1437 aa12□□□□□ -0.49
ITSN1-228ENST00000479424 YBX3P16989 372 aaKnown RBP eCLIP11.99□□□□□ -0.49
ITSN1-228ENST00000479424 PALLDQ8WX93 1383 aa11.98□□□□□ -0.49
ITSN1-228ENST00000479424 MPRIPQ6WCQ1 1025 aa11.98□□□□□ -0.49
ITSN1-228ENST00000479424 C1QTNF8P60827 252 aa11.97□□□□□ -0.49
ITSN1-228ENST00000479424 NKX1-1Q15270 411 aaPredicted RBP11.97□□□□□ -0.49
ITSN1-228ENST00000479424 CDCA8Q53HL2 280 aa11.97□□□□□ -0.49
ITSN1-228ENST00000479424 MSL1Q68DK7 614 aa11.97□□□□□ -0.49
ITSN1-228ENST00000479424 WASHC2AQ641Q2 1341 aa11.96□□□□□ -0.49
ITSN1-228ENST00000479424 MSH5O43196 834 aa11.96□□□□□ -0.49
ITSN1-228ENST00000479424 TRIM26Q12899 539 aaPredicted RBP11.96□□□□□ -0.49
ITSN1-228ENST00000479424 SMIM5Q71RC9 77 aa11.96□□□□□ -0.49
ITSN1-228ENST00000479424 PELP1Q8IZL8 1130 aaKnown RBP11.96□□□□□ -0.49
ITSN1-228ENST00000479424 PIGBQ92521 554 aa11.96□□□□□ -0.49
ITSN1-228ENST00000479424 EYA1Q99502 592 aa11.95□□□□□ -0.5
ITSN1-228ENST00000479424 POLKQ9UBT6 870 aa11.94□□□□□ -0.5
ITSN1-228ENST00000479424 MYH14Q7Z406 1995 aaKnown RBP11.93□□□□□ -0.5
ITSN1-228ENST00000479424 PPM1GO15355 546 aaPredicted RBP11.93□□□□□ -0.5
ITSN1-228ENST00000479424 LINC00116Q8NCU8 138 aa11.93□□□□□ -0.5
ITSN1-228ENST00000479424 CD2APQ9Y5K6 639 aa11.93□□□□□ -0.5
ITSN1-228ENST00000479424 KIF13BQ9NQT8 1826 aa11.93□□□□□ -0.5
ITSN1-228ENST00000479424 KIAA1551Q9HCM1 1747 aa11.92□□□□□ -0.5
ITSN1-228ENST00000479424 SENP3-EIF4A1A0A087X0R7 540 aa11.92□□□□□ -0.5
ITSN1-228ENST00000479424 LOC102724428A0A0B4J2F2 783 aa11.92□□□□□ -0.5
ITSN1-228ENST00000479424 SIK1P57059 783 aa11.92□□□□□ -0.5
ITSN1-228ENST00000479424 FLAD1Q8NFF5 587 aa11.92□□□□□ -0.5
ITSN1-228ENST00000479424 SMARCC1Q92922 1105 aaPredicted RBP11.92□□□□□ -0.5
ITSN1-228ENST00000479424 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.92□□□□□ -0.5
ITSN1-228ENST00000479424 ASAP1Q9ULH1 1129 aa11.92□□□□□ -0.5
ITSN1-228ENST00000479424 SPG7Q9UQ90 795 aa11.92□□□□□ -0.5
ITSN1-228ENST00000479424 COL5A3P25940 1745 aaPredicted RBP11.91□□□□□ -0.5
ITSN1-228ENST00000479424 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.91□□□□□ -0.5
ITSN1-228ENST00000479424 GRIN3BO60391 1043 aa11.91□□□□□ -0.5
ITSN1-228ENST00000479424 ITPK1Q13572 414 aa11.91□□□□□ -0.5
ITSN1-228ENST00000479424 EIF4A2Q14240 407 aaKnown RBP11.91□□□□□ -0.5
ITSN1-228ENST00000479424 AK7Q96M32 723 aa11.91□□□□□ -0.5
ITSN1-228ENST00000479424 ZNF831Q5JPB2 1677 aa11.91□□□□□ -0.5
ITSN1-228ENST00000479424 GIGYF1O75420 1035 aaPredicted RBP11.9□□□□□ -0.5
ITSN1-228ENST00000479424 PHF14O94880 888 aa11.9□□□□□ -0.5
ITSN1-228ENST00000479424 PHKG2P15735 406 aa11.9□□□□□ -0.5
ITSN1-228ENST00000479424 ATG3Q9NT62 314 aa11.9□□□□□ -0.5
ITSN1-228ENST00000479424 TIMELESSQ9UNS1 1208 aa11.9□□□□□ -0.5
ITSN1-228ENST00000479424 N4BP2Q86UW6 1770 aaPredicted RBP11.9□□□□□ -0.51
ITSN1-228ENST00000479424 VIRMAQ69YN4 1812 aaKnown RBP11.89□□□□□ -0.51
ITSN1-228ENST00000479424 HMGB2P26583 209 aaKnown RBP11.89□□□□□ -0.51
ITSN1-228ENST00000479424 SSFA2P28290 1259 aa11.89□□□□□ -0.51
ITSN1-228ENST00000479424 IFNL2Q8IZJ0 200 aa11.89□□□□□ -0.51
ITSN1-228ENST00000479424 SLC4A9Q96Q91 983 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms