RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 RGPD2P0DJD1 1756 aa20.46■□□□□ 0.87
COL16A1-211ENST00000479100 LRP5O75197 1615 aa20.45■□□□□ 0.87
COL16A1-211ENST00000479100 PTF1AQ7RTS3 328 aa20.45■□□□□ 0.86
COL16A1-211ENST00000479100 PRKRIP1Q9H875 184 aaPredicted RBP20.45■□□□□ 0.86
COL16A1-211ENST00000479100 LRRC37A3O60309 1634 aa20.45■□□□□ 0.86
COL16A1-211ENST00000479100 IL13P35225 146 aa20.44■□□□□ 0.86
COL16A1-211ENST00000479100 RAPGEF4Q8WZA2 1011 aa20.44■□□□□ 0.86
COL16A1-211ENST00000479100 EXOC5O00471 708 aa20.43■□□□□ 0.86
COL16A1-211ENST00000479100 PLSCR1O15162 318 aa20.43■□□□□ 0.86
COL16A1-211ENST00000479100 BCL11BQ9C0K0 894 aaPredicted RBP20.43■□□□□ 0.86
COL16A1-211ENST00000479100 MYBBP1AQ9BQG0 1328 aaKnown RBP20.43■□□□□ 0.86
COL16A1-211ENST00000479100 U2SURPO15042 1029 aaKnown RBP20.42■□□□□ 0.86
COL16A1-211ENST00000479100 ANP32CO43423 234 aa20.42■□□□□ 0.86
COL16A1-211ENST00000479100 TATP17735 454 aaPredicted RBP20.42■□□□□ 0.86
COL16A1-211ENST00000479100 SULT6B1Q6IMI4 303 aa20.4■□□□□ 0.86
COL16A1-211ENST00000479100 IGSF1Q8N6C5 1336 aa20.4■□□□□ 0.86
COL16A1-211ENST00000479100 AEBP1Q8IUX7 1158 aa20.39■□□□□ 0.85
COL16A1-211ENST00000479100 PROM2Q8N271 834 aa20.39■□□□□ 0.85
COL16A1-211ENST00000479100 NUDCQ9Y266 331 aa20.39■□□□□ 0.85
COL16A1-211ENST00000479100 RREB1Q92766 1687 aa20.38■□□□□ 0.85
COL16A1-211ENST00000479100 COL3A1P02461 1466 aaPredicted RBP20.38■□□□□ 0.85
COL16A1-211ENST00000479100 NBPF14Q5TI25 921 aa20.38■□□□□ 0.85
COL16A1-211ENST00000479100 WNK3Q9BYP7 1800 aa20.38■□□□□ 0.85
COL16A1-211ENST00000479100 MEGF6O75095 1541 aa20.37■□□□□ 0.85
COL16A1-211ENST00000479100 HMOX1P09601 288 aa20.37■□□□□ 0.85
COL16A1-211ENST00000479100 ZCRB1Q8TBF4 217 aaKnown RBP20.37■□□□□ 0.85
COL16A1-211ENST00000479100 DDX54Q8TDD1 881 aaKnown RBP20.37■□□□□ 0.85
COL16A1-211ENST00000479100 TNS2Q63HR2 1409 aa20.36■□□□□ 0.85
COL16A1-211ENST00000479100 NCAPD2Q15021 1401 aa20.36■□□□□ 0.85
COL16A1-211ENST00000479100 NUP188Q5SRE5 1749 aa20.35■□□□□ 0.85
COL16A1-211ENST00000479100 U2AF1L5P0DN76 240 aaPredicted RBP20.34■□□□□ 0.85
COL16A1-211ENST00000479100 U2AF1Q01081 240 aaKnown RBP eCLIP20.34■□□□□ 0.85
COL16A1-211ENST00000479100 ANO8Q9HCE9 1232 aaPredicted RBP20.33■□□□□ 0.85
COL16A1-211ENST00000479100 KCNQ2O43526 872 aa20.32■□□□□ 0.84
COL16A1-211ENST00000479100 SPG7Q9UQ90 795 aa20.32■□□□□ 0.84
COL16A1-211ENST00000479100 SBF2Q86WG5 1849 aa20.3■□□□□ 0.84
COL16A1-211ENST00000479100 PLEKHO1Q53GL0 409 aaPredicted RBP20.3■□□□□ 0.84
COL16A1-211ENST00000479100 TXNRD1Q16881 649 aa20.29■□□□□ 0.84
COL16A1-211ENST00000479100 KDRP35968 1356 aa20.29■□□□□ 0.84
COL16A1-211ENST00000479100 RGPD3A6NKT7 1758 aaPredicted RBP20.29■□□□□ 0.84
COL16A1-211ENST00000479100 RGPD4Q7Z3J3 1758 aa20.29■□□□□ 0.84
COL16A1-211ENST00000479100 PCDH11XQ9BZA7 1347 aa20.28■□□□□ 0.84
COL16A1-211ENST00000479100 PCDH11YQ9BZA8 1340 aa20.28■□□□□ 0.84
COL16A1-211ENST00000479100 DIEXFQ68CQ4 756 aaKnown RBP20.27■□□□□ 0.84
COL16A1-211ENST00000479100 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.27■□□□□ 0.845e-7■■■■■ 31.6
COL16A1-211ENST00000479100 PRKAR2BP31323 418 aa20.26■□□□□ 0.83
COL16A1-211ENST00000479100 WDR43Q15061 677 aaKnown RBP eCLIP20.26■□□□□ 0.83
COL16A1-211ENST00000479100 AMOTQ4VCS5 1084 aa20.26■□□□□ 0.83
COL16A1-211ENST00000479100 ZNF530Q6P9A1 599 aaPredicted RBP20.26■□□□□ 0.83
COL16A1-211ENST00000479100 ACSBG1Q96GR2 724 aa20.26■□□□□ 0.83
COL16A1-211ENST00000479100 CYP27B1O15528 508 aa20.25■□□□□ 0.83
COL16A1-211ENST00000479100 PDGFDQ9GZP0 370 aaPredicted RBP20.25■□□□□ 0.83
COL16A1-211ENST00000479100 RSPH6AQ9H0K4 717 aa20.25■□□□□ 0.83
COL16A1-211ENST00000479100 SPON1Q9HCB6 807 aa20.25■□□□□ 0.83
COL16A1-211ENST00000479100 FCHSD2O94868 740 aa20.24■□□□□ 0.83
COL16A1-211ENST00000479100 CCDC184Q52MB2 194 aa20.24■□□□□ 0.83
COL16A1-211ENST00000479100 IFNL2Q8IZJ0 200 aa20.24■□□□□ 0.83
COL16A1-211ENST00000479100 C1orf141Q5JVX7 400 aa20.23■□□□□ 0.83
COL16A1-211ENST00000479100 MRS2Q9HD23 443 aa20.23■□□□□ 0.83
COL16A1-211ENST00000479100 PKD1L3Q7Z443 1732 aa20.22■□□□□ 0.83
COL16A1-211ENST00000479100 PHKG2P15735 406 aa20.22■□□□□ 0.83
COL16A1-211ENST00000479100 NEFMP07197 916 aa20.21■□□□□ 0.83
COL16A1-211ENST00000479100 SLC15A2Q16348 729 aa20.21■□□□□ 0.83
COL16A1-211ENST00000479100 MTHFSDQ2M296 383 aaKnown RBP20.21■□□□□ 0.83
COL16A1-211ENST00000479100 SYTL4Q96C24 671 aaPredicted RBP20.21■□□□□ 0.83
COL16A1-211ENST00000479100 SHANK3Q9BYB0 1731 aa20.21■□□□□ 0.83
COL16A1-211ENST00000479100 PLEKHG2Q9H7P9 1386 aa20.21■□□□□ 0.83
COL16A1-211ENST00000479100 PHACTR3Q96KR7 559 aa20.2■□□□□ 0.82
COL16A1-211ENST00000479100 NHSQ6T4R5 1651 aa20.19■□□□□ 0.82
COL16A1-211ENST00000479100 PNNQ9H307 717 aaKnown RBP20.19■□□□□ 0.82
COL16A1-211ENST00000479100 STK32BQ9NY57 414 aa20.19■□□□□ 0.82
COL16A1-211ENST00000479100 HSP90AB1P08238 724 aaKnown RBP20.18■□□□□ 0.82
COL16A1-211ENST00000479100 PRIM1P49642 420 aaKnown RBP20.18■□□□□ 0.82
COL16A1-211ENST00000479100 GAS2L2Q8NHY3 880 aa20.18■□□□□ 0.82
COL16A1-211ENST00000479100 ADAMTS8Q9UP79 889 aa20.18■□□□□ 0.82
COL16A1-211ENST00000479100 KAT6BQ8WYB5 2073 aa20.18■□□□□ 0.82
COL16A1-211ENST00000479100 PTGER2P43116 358 aa20.17■□□□□ 0.82
COL16A1-211ENST00000479100 AKAP4Q5JQC9 854 aa20.17■□□□□ 0.82
COL16A1-211ENST00000479100 LRRC4BQ9NT99 713 aa20.17■□□□□ 0.82
COL16A1-211ENST00000479100 MAPK8IP3Q9UPT6 1336 aa20.17■□□□□ 0.82
COL16A1-211ENST00000479100 NKX1-1Q15270 411 aaPredicted RBP20.16■□□□□ 0.82
COL16A1-211ENST00000479100 MPRIPQ6WCQ1 1025 aa20.16■□□□□ 0.82
COL16A1-211ENST00000479100 CCDC146Q8IYE0 955 aa20.16■□□□□ 0.82
COL16A1-211ENST00000479100 CASZ1Q86V15 1759 aa20.16■□□□□ 0.82
COL16A1-211ENST00000479100 ZBTB7AO95365 584 aa20.15■□□□□ 0.82
COL16A1-211ENST00000479100 DCAF5Q96JK2 942 aa20.15■□□□□ 0.82
COL16A1-211ENST00000479100 PLEKHF1Q96S99 279 aa20.14■□□□□ 0.81
COL16A1-211ENST00000479100 UTRNP46939 3433 aa20.14■□□□□ 0.81
COL16A1-211ENST00000479100 ZNF827Q17R98 1081 aa20.13■□□□□ 0.81
COL16A1-211ENST00000479100 SGIP1Q9BQI5 828 aa20.13■□□□□ 0.81
COL16A1-211ENST00000479100 PPP1R1BQ9UD71 204 aaPredicted RBP20.13■□□□□ 0.81
COL16A1-211ENST00000479100 DOT1LQ8TEK3 1739 aa20.13■□□□□ 0.81
COL16A1-211ENST00000479100 PAPPAQ13219 1627 aa20.13■□□□□ 0.81
COL16A1-211ENST00000479100 GNAT3A8MTJ3 354 aa20.12■□□□□ 0.81
COL16A1-211ENST00000479100 PNISRQ8TF01 805 aaKnown RBP20.12■□□□□ 0.81
COL16A1-211ENST00000479100 MAP3K5Q99683 1374 aa20.11■□□□□ 0.81
COL16A1-211ENST00000479100 SLC27A3Q5K4L6 730 aa20.11■□□□□ 0.81
COL16A1-211ENST00000479100 MIER1Q8N108 512 aa20.11■□□□□ 0.81
COL16A1-211ENST00000479100 AKT1S1Q96B36 256 aa20.11■□□□□ 0.81
COL16A1-211ENST00000479100 RUNDC1Q96C34 613 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms