RNA–Protein interactions for RNA: ENST00000478800.1

CDKN1A-207, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 2

Gene CDKN1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-207ENST00000478800 PTF1AQ7RTS3 328 aa23.06■■□□□ 1.28
CDKN1A-207ENST00000478800 EYA1Q99502 592 aa23.06■■□□□ 1.28
CDKN1A-207ENST00000478800 KCNQ2O43526 872 aa23.05■■□□□ 1.28
CDKN1A-207ENST00000478800 MAP2P11137 1827 aaKnown RBP23.05■■□□□ 1.28
CDKN1A-207ENST00000478800 PSDA5PKW4 1024 aaPredicted RBP23.03■■□□□ 1.28
CDKN1A-207ENST00000478800 RGPD2P0DJD1 1756 aa23.03■■□□□ 1.28
CDKN1A-207ENST00000478800 PCDH11XQ9BZA7 1347 aa23.03■■□□□ 1.28
CDKN1A-207ENST00000478800 PCDH11YQ9BZA8 1340 aa23.03■■□□□ 1.28
CDKN1A-207ENST00000478800 SYTL4Q96C24 671 aaPredicted RBP23.02■■□□□ 1.28
CDKN1A-207ENST00000478800 SPG7Q9UQ90 795 aa23.01■■□□□ 1.27
CDKN1A-207ENST00000478800 R3HDM1Q15032 1099 aaKnown RBP23■■□□□ 1.27
CDKN1A-207ENST00000478800 NPC1L1Q9UHC9 1359 aa23■■□□□ 1.27
CDKN1A-207ENST00000478800 SBF2Q86WG5 1849 aa22.98■■□□□ 1.27
CDKN1A-207ENST00000478800 PRIM1P49642 420 aaKnown RBP22.98■■□□□ 1.27
CDKN1A-207ENST00000478800 MTHFSP49914 203 aa22.98■■□□□ 1.27
CDKN1A-207ENST00000478800 NCAPD2Q15021 1401 aa22.97■■□□□ 1.27
CDKN1A-207ENST00000478800 TXNRD1Q16881 649 aa22.96■■□□□ 1.27
CDKN1A-207ENST00000478800 IGSF1Q8N6C5 1336 aa22.96■■□□□ 1.27
CDKN1A-207ENST00000478800 LRP5O75197 1615 aa22.96■■□□□ 1.27
CDKN1A-207ENST00000478800 NHSQ6T4R5 1651 aa22.96■■□□□ 1.27
CDKN1A-207ENST00000478800 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.95■■□□□ 1.26
CDKN1A-207ENST00000478800 CYP27B1O15528 508 aa22.93■■□□□ 1.26
CDKN1A-207ENST00000478800 IL13P35225 146 aa22.92■■□□□ 1.26
CDKN1A-207ENST00000478800 ZEB1P37275 1124 aaPredicted RBP22.92■■□□□ 1.26
CDKN1A-207ENST00000478800 PROM2Q8N271 834 aa22.92■■□□□ 1.26
CDKN1A-207ENST00000478800 RGPD3A6NKT7 1758 aaPredicted RBP22.91■■□□□ 1.26
CDKN1A-207ENST00000478800 RGPD4Q7Z3J3 1758 aa22.91■■□□□ 1.26
CDKN1A-207ENST00000478800 RREB1Q92766 1687 aa22.91■■□□□ 1.26
CDKN1A-207ENST00000478800 PLEKHO1Q53GL0 409 aaPredicted RBP22.91■■□□□ 1.26
CDKN1A-207ENST00000478800 SULT6B1Q6IMI4 303 aa22.91■■□□□ 1.26
CDKN1A-207ENST00000478800 DIAPH1O60610 1272 aaKnown RBP22.9■■□□□ 1.26
CDKN1A-207ENST00000478800 IFNL2Q8IZJ0 200 aa22.9■■□□□ 1.26
CDKN1A-207ENST00000478800 STK32BQ9NY57 414 aa22.9■■□□□ 1.26
CDKN1A-207ENST00000478800 PLEKHG2Q9H7P9 1386 aa22.89■■□□□ 1.26
CDKN1A-207ENST00000478800 AMOTQ4VCS5 1084 aa22.89■■□□□ 1.25
CDKN1A-207ENST00000478800 KAT6BQ8WYB5 2073 aa22.89■■□□□ 1.25
CDKN1A-207ENST00000478800 NUP188Q5SRE5 1749 aa22.88■■□□□ 1.25
CDKN1A-207ENST00000478800 MPRIPQ6WCQ1 1025 aa22.88■■□□□ 1.25
CDKN1A-207ENST00000478800 SHANK3Q9BYB0 1731 aa22.88■■□□□ 1.25
CDKN1A-207ENST00000478800 PHKG2P15735 406 aa22.87■■□□□ 1.25
CDKN1A-207ENST00000478800 SLC27A3Q5K4L6 730 aa22.87■■□□□ 1.25
CDKN1A-207ENST00000478800 AEBP1Q8IUX7 1158 aa22.87■■□□□ 1.25
CDKN1A-207ENST00000478800 CFAP53Q96M91 514 aa22.87■■□□□ 1.25
CDKN1A-207ENST00000478800 DOT1LQ8TEK3 1739 aa22.86■■□□□ 1.25
CDKN1A-207ENST00000478800 NKX1-1Q15270 411 aaPredicted RBP22.86■■□□□ 1.25
CDKN1A-207ENST00000478800 BTAF1O14981 1849 aa22.85■■□□□ 1.25
CDKN1A-207ENST00000478800 HSP90AB1P08238 724 aaKnown RBP22.85■■□□□ 1.25
CDKN1A-207ENST00000478800 ANO8Q9HCE9 1232 aaPredicted RBP22.85■■□□□ 1.25
CDKN1A-207ENST00000478800 PKD1L3Q7Z443 1732 aa22.85■■□□□ 1.25
CDKN1A-207ENST00000478800 C1orf141Q5JVX7 400 aa22.84■■□□□ 1.25
CDKN1A-207ENST00000478800 ZNF530Q6P9A1 599 aaPredicted RBP22.84■■□□□ 1.25
CDKN1A-207ENST00000478800 U2SURPO15042 1029 aaKnown RBP22.83■■□□□ 1.25
CDKN1A-207ENST00000478800 SLC15A2Q16348 729 aa22.83■■□□□ 1.25
CDKN1A-207ENST00000478800 HMOX1P09601 288 aa22.82■■□□□ 1.24
CDKN1A-207ENST00000478800 TMOD3Q9NYL9 352 aa22.82■■□□□ 1.24
CDKN1A-207ENST00000478800 CCNL1Q9UK58 526 aaPredicted RBP22.82■■□□□ 1.24
CDKN1A-207ENST00000478800 KDRP35968 1356 aa22.81■■□□□ 1.24
CDKN1A-207ENST00000478800 HMGB2P26583 209 aaKnown RBP22.81■■□□□ 1.24
CDKN1A-207ENST00000478800 SMARCC1Q92922 1105 aaPredicted RBP22.81■■□□□ 1.24
CDKN1A-207ENST00000478800 PPP2R1AP30153 589 aa22.8■■□□□ 1.24
CDKN1A-207ENST00000478800 DCAF5Q96JK2 942 aa22.8■■□□□ 1.24
CDKN1A-207ENST00000478800 LRRC4BQ9NT99 713 aa22.8■■□□□ 1.24
CDKN1A-207ENST00000478800 PIGBQ92521 554 aa22.79■■□□□ 1.24
CDKN1A-207ENST00000478800 NUDCQ9Y266 331 aa22.79■■□□□ 1.24
CDKN1A-207ENST00000478800 PALLDQ8WX93 1383 aa22.77■■□□□ 1.24
CDKN1A-207ENST00000478800 KCNQ4P56696 695 aa22.77■■□□□ 1.24
CDKN1A-207ENST00000478800 DDX10Q13206 875 aaKnown RBP22.77■■□□□ 1.24
CDKN1A-207ENST00000478800 SPON1Q9HCB6 807 aa22.77■■□□□ 1.24
CDKN1A-207ENST00000478800 ERVV-2B6SEH9 535 aa22.76■■□□□ 1.23
CDKN1A-207ENST00000478800 CABP4P57796 275 aa22.75■■□□□ 1.23
CDKN1A-207ENST00000478800 AKAP4Q5JQC9 854 aa22.74■■□□□ 1.23
CDKN1A-207ENST00000478800 TFCP2L1Q9NZI6 479 aa22.74■■□□□ 1.23
CDKN1A-207ENST00000478800 COL3A1P02461 1466 aaPredicted RBP22.73■■□□□ 1.23
CDKN1A-207ENST00000478800 ZNF827Q17R98 1081 aa22.72■■□□□ 1.23
CDKN1A-207ENST00000478800 AKT1S1Q96B36 256 aa22.72■■□□□ 1.23
CDKN1A-207ENST00000478800 PPP1R1BQ9UD71 204 aaPredicted RBP22.72■■□□□ 1.23
CDKN1A-207ENST00000478800 ZBTB7AO95365 584 aa22.71■■□□□ 1.23
CDKN1A-207ENST00000478800 TOGARAM1Q9Y4F4 1720 aa22.71■■□□□ 1.23
CDKN1A-207ENST00000478800 U2AF1L5P0DN76 240 aaPredicted RBP22.7■■□□□ 1.22
CDKN1A-207ENST00000478800 U2AF1Q01081 240 aaKnown RBP eCLIP22.7■■□□□ 1.22
CDKN1A-207ENST00000478800 PDGFDQ9GZP0 370 aaPredicted RBP22.7■■□□□ 1.22
CDKN1A-207ENST00000478800 ASAP1Q9ULH1 1129 aa22.7■■□□□ 1.22
CDKN1A-207ENST00000478800 MTHFSDQ2M296 383 aaKnown RBP22.69■■□□□ 1.22
CDKN1A-207ENST00000478800 PAPPAQ13219 1627 aa22.68■■□□□ 1.22
CDKN1A-207ENST00000478800 KDM6AO15550 1401 aaPredicted RBP22.68■■□□□ 1.22
CDKN1A-207ENST00000478800 LOC102724428A0A0B4J2F2 783 aa22.68■■□□□ 1.22
CDKN1A-207ENST00000478800 SIK1P57059 783 aa22.68■■□□□ 1.22
CDKN1A-207ENST00000478800 RALBP1Q15311 655 aa22.68■■□□□ 1.22
CDKN1A-207ENST00000478800 ATG3Q9NT62 314 aa22.68■■□□□ 1.22
CDKN1A-207ENST00000478800 GAS2L2Q8NHY3 880 aa22.67■■□□□ 1.22
CDKN1A-207ENST00000478800 MTFR1LQ9H019 292 aa22.67■■□□□ 1.22
CDKN1A-207ENST00000478800 LY75O60449 1722 aa22.67■■□□□ 1.22
CDKN1A-207ENST00000478800 ITGB4P16144 1822 aa22.66■■□□□ 1.22
CDKN1A-207ENST00000478800 MSH5O43196 834 aa22.66■■□□□ 1.22
CDKN1A-207ENST00000478800 NFATC2IPQ8NCF5 419 aa22.66■■□□□ 1.22
CDKN1A-207ENST00000478800 AK7Q96M32 723 aa22.66■■□□□ 1.22
CDKN1A-207ENST00000478800 ATF5Q9Y2D1 282 aaPredicted RBP22.66■■□□□ 1.22
CDKN1A-207ENST00000478800 PRKAR2BP31323 418 aa22.65■■□□□ 1.22
CDKN1A-207ENST00000478800 ATP6V1AP38606 617 aa22.65■■□□□ 1.22
CDKN1A-207ENST00000478800 RBM42Q9BTD8 480 aaKnown RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms