RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 RNF20Q5VTR2 975 aa8.02□□□□□ -1.13
VLDLR-204ENST00000478776 FOXR1Q6PIV2 292 aa8.02□□□□□ -1.13
VLDLR-204ENST00000478776 TRIM34Q9BYJ4 488 aa8.02□□□□□ -1.13
VLDLR-204ENST00000478776 RNF144AP50876 292 aaPredicted RBP8.01□□□□□ -1.13
VLDLR-204ENST00000478776 ZNF592Q92610 1267 aa8.01□□□□□ -1.13
VLDLR-204ENST00000478776 ADAMTS2O95450 1211 aa8□□□□□ -1.13
VLDLR-204ENST00000478776 RHOQP17081 205 aa8□□□□□ -1.13
VLDLR-204ENST00000478776 NEUROD2Q15784 382 aa8□□□□□ -1.13
VLDLR-204ENST00000478776 RIPOR1Q6ZS17 1223 aa8□□□□□ -1.13
VLDLR-204ENST00000478776 KDF1Q8NAX2 398 aaPredicted RBP8□□□□□ -1.13
VLDLR-204ENST00000478776 IL27Q8NEV9 243 aa8□□□□□ -1.13
VLDLR-204ENST00000478776 WHAMMQ8TF30 809 aa8□□□□□ -1.13
VLDLR-204ENST00000478776 NLRP3Q96P20 1036 aa8□□□□□ -1.13
VLDLR-204ENST00000478776 ZNF330Q9Y3S2 320 aaPredicted RBP8□□□□□ -1.13
VLDLR-204ENST00000478776 FBXO45P0C2W1 286 aa7.99□□□□□ -1.13
VLDLR-204ENST00000478776 MCCD1P59942 119 aaPredicted RBP7.99□□□□□ -1.13
VLDLR-204ENST00000478776 SRSF11Q05519 484 aaKnown RBP7.99□□□□□ -1.13
VLDLR-204ENST00000478776 SLC27A3Q5K4L6 730 aa7.99□□□□□ -1.13
VLDLR-204ENST00000478776 GMCL1Q96IK5 515 aa7.99□□□□□ -1.13
VLDLR-204ENST00000478776 ENAMQ9NRM1 1142 aa7.99□□□□□ -1.13
VLDLR-204ENST00000478776 A0A1W2PRU2 124 aa7.98□□□□□ -1.13
VLDLR-204ENST00000478776 GPC1P35052 558 aa7.98□□□□□ -1.13
VLDLR-204ENST00000478776 IRS1P35568 1242 aa7.98□□□□□ -1.13
VLDLR-204ENST00000478776 GSK3AP49840 483 aa7.98□□□□□ -1.13
VLDLR-204ENST00000478776 CC2D2BQ6DHV5 1058 aa7.98□□□□□ -1.13
VLDLR-204ENST00000478776 SCARF2Q96GP6 870 aaPredicted RBP7.98□□□□□ -1.13
VLDLR-204ENST00000478776 CYP2U1Q7Z449 544 aa7.97□□□□□ -1.13
VLDLR-204ENST00000478776 H7C1W4 665 aa7.96□□□□□ -1.14
VLDLR-204ENST00000478776 ARHGEF15O94989 841 aa7.96□□□□□ -1.14
VLDLR-204ENST00000478776 KANK3Q6NY19 840 aa7.96□□□□□ -1.14
VLDLR-204ENST00000478776 TRIM22Q8IYM9 498 aa7.96□□□□□ -1.14
VLDLR-204ENST00000478776 GAS2L1Q99501 681 aaPredicted RBP7.96□□□□□ -1.14
VLDLR-204ENST00000478776 CUEDC1Q9NWM3 386 aaPredicted RBP7.96□□□□□ -1.14
VLDLR-204ENST00000478776 ERVK-9P63128 1117 aa7.95□□□□□ -1.14
VLDLR-204ENST00000478776 POU4F2Q12837 409 aa7.95□□□□□ -1.14
VLDLR-204ENST00000478776 NR1H3Q13133 447 aa7.95□□□□□ -1.14
VLDLR-204ENST00000478776 LYPD4Q6UWN0 246 aa7.95□□□□□ -1.14
VLDLR-204ENST00000478776 GJD4Q96KN9 370 aaPredicted RBP7.95□□□□□ -1.14
VLDLR-204ENST00000478776 TRERF1Q96PN7 1200 aa7.95□□□□□ -1.14
VLDLR-204ENST00000478776 DYRK1BQ9Y463 629 aa7.95□□□□□ -1.14
VLDLR-204ENST00000478776 APBB1O00213 710 aa7.94□□□□□ -1.14
VLDLR-204ENST00000478776 ZNF837Q96EG3 531 aaPredicted RBP7.94□□□□□ -1.14
VLDLR-204ENST00000478776 MBIPQ9NS73 344 aa7.94□□□□□ -1.14
VLDLR-204ENST00000478776 PCDHB11Q9Y5F2 797 aa7.94□□□□□ -1.14
VLDLR-204ENST00000478776 GPR25O00155 361 aa7.93□□□□□ -1.14
VLDLR-204ENST00000478776 CELA2BP08218 269 aaPredicted RBP7.93□□□□□ -1.14
VLDLR-204ENST00000478776 GAS6Q14393 721 aa7.93□□□□□ -1.14
VLDLR-204ENST00000478776 SUZ12Q15022 739 aaKnown RBP7.93□□□□□ -1.14
VLDLR-204ENST00000478776 CLN3Q13286 438 aa7.92□□□□□ -1.14
VLDLR-204ENST00000478776 DBN1Q16643 649 aa7.92□□□□□ -1.14
VLDLR-204ENST00000478776 GPAT2Q6NUI2 795 aa7.92□□□□□ -1.14
VLDLR-204ENST00000478776 BANK1Q8NDB2 785 aa7.92□□□□□ -1.14
VLDLR-204ENST00000478776 NEDD1Q8NHV4 660 aa7.92□□□□□ -1.14
VLDLR-204ENST00000478776 GTPBP3Q969Y2 492 aaKnown RBP7.92□□□□□ -1.14
VLDLR-204ENST00000478776 NSFL1CQ9UNZ2 370 aaKnown RBP7.92□□□□□ -1.14
VLDLR-204ENST00000478776 DNMT3AQ9Y6K1 912 aaPredicted RBP7.92□□□□□ -1.14
VLDLR-204ENST00000478776 NDUFB9Q9Y6M9 179 aa7.92□□□□□ -1.14
VLDLR-204ENST00000478776 NBPF10Q6P3W6 841 aaKnown RBP7.91□□□□□ -1.14
VLDLR-204ENST00000478776 NBPF15Q8N660 670 aa7.91□□□□□ -1.14
VLDLR-204ENST00000478776 TIMMDC1Q9NPL8 285 aa7.91□□□□□ -1.14
VLDLR-204ENST00000478776 IGF1RP08069 1367 aa7.9□□□□□ -1.14
VLDLR-204ENST00000478776 MYCP01106 439 aaPredicted RBP7.9□□□□□ -1.14
VLDLR-204ENST00000478776 IGHA1P01876 353 aa7.9□□□□□ -1.14
VLDLR-204ENST00000478776 GTF2E1P29083 439 aaPredicted RBP7.9□□□□□ -1.14
VLDLR-204ENST00000478776 TAS1R3Q7RTX0 852 aa7.9□□□□□ -1.14
VLDLR-204ENST00000478776 PODNQ7Z5L7 613 aa7.9□□□□□ -1.14
VLDLR-204ENST00000478776 GRIP2Q9C0E4 1043 aa7.9□□□□□ -1.14
VLDLR-204ENST00000478776 ARHGEF10LQ9HCE6 1279 aa7.9□□□□□ -1.14
VLDLR-204ENST00000478776 PHF20L1A8MW92 1017 aa7.89□□□□□ -1.15
VLDLR-204ENST00000478776 MX2P20592 715 aa7.89□□□□□ -1.15
VLDLR-204ENST00000478776 SCTRP47872 440 aa7.89□□□□□ -1.15
VLDLR-204ENST00000478776 FOXK2Q01167 660 aa7.89□□□□□ -1.15
VLDLR-204ENST00000478776 WDR44Q5JSH3 913 aa7.89□□□□□ -1.15
VLDLR-204ENST00000478776 SPATA31C2B4DYI2 1134 aa7.88□□□□□ -1.15
VLDLR-204ENST00000478776 WASLO00401 505 aaPredicted RBP7.88□□□□□ -1.15
VLDLR-204ENST00000478776 GNRH1P01148 92 aa7.88□□□□□ -1.15
VLDLR-204ENST00000478776 F11P03951 625 aa7.88□□□□□ -1.15
VLDLR-204ENST00000478776 BCRP11274 1271 aa7.88□□□□□ -1.15
VLDLR-204ENST00000478776 BEND7Q8N7W2 519 aaPredicted RBP7.88□□□□□ -1.15
VLDLR-204ENST00000478776 NUCKS1Q9H1E3 243 aaKnown RBP7.88□□□□□ -1.15
VLDLR-204ENST00000478776 OSBPL3Q9H4L5 887 aa7.88□□□□□ -1.15
VLDLR-204ENST00000478776 RAB6BQ9NRW1 208 aa7.87□□□□□ -1.15
VLDLR-204ENST00000478776 SOCS7O14512 581 aa7.86□□□□□ -1.15
VLDLR-204ENST00000478776 TRAK2O60296 914 aa7.86□□□□□ -1.15
VLDLR-204ENST00000478776 CNKSR1Q969H4 720 aa7.86□□□□□ -1.15
VLDLR-204ENST00000478776 ESYT1Q9BSJ8 1104 aa7.86□□□□□ -1.15
VLDLR-204ENST00000478776 PRM3Q9NNZ6 103 aa7.86□□□□□ -1.15
VLDLR-204ENST00000478776 LOC100996750A0A140TA64 210 aa7.85□□□□□ -1.15
VLDLR-204ENST00000478776 CENPCQ03188 943 aa7.85□□□□□ -1.15
VLDLR-204ENST00000478776 GNASQ5JWF2 1037 aa7.85□□□□□ -1.15
VLDLR-204ENST00000478776 MTMR14Q8NCE2 650 aa7.85□□□□□ -1.15
VLDLR-204ENST00000478776 ZSCAN10Q96SZ4 725 aaPredicted RBP7.85□□□□□ -1.15
VLDLR-204ENST00000478776 KRTAP4-6Q9BYQ5 205 aa7.85□□□□□ -1.15
VLDLR-204ENST00000478776 PHF24Q9UPV7 400 aa7.85□□□□□ -1.15
VLDLR-204ENST00000478776 CNTNAP5Q8WYK1 1306 aa7.84□□□□□ -1.15
VLDLR-204ENST00000478776 PHKA2P46019 1235 aa7.84□□□□□ -1.15
VLDLR-204ENST00000478776 BRPF1P55201 1214 aaPredicted RBP7.84□□□□□ -1.15
VLDLR-204ENST00000478776 ESCO1Q5FWF5 840 aa7.84□□□□□ -1.15
VLDLR-204ENST00000478776 TMEM214Q6NUQ4 689 aaKnown RBP7.84□□□□□ -1.15
VLDLR-204ENST00000478776 ACDQ96AP0 544 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms