RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 SRPK2P78362 688 aaKnown RBP18.12■□□□□ 0.49
HDAC8-217ENST00000478743 IL2RBP14784 551 aa18.11■□□□□ 0.49
HDAC8-217ENST00000478743 CABP1Q9NZU7 370 aa18.11■□□□□ 0.49
HDAC8-217ENST00000478743 ERBB3P21860 1342 aa18.11■□□□□ 0.49
HDAC8-217ENST00000478743 N4BP2Q86UW6 1770 aaPredicted RBP18.09■□□□□ 0.49
HDAC8-217ENST00000478743 NLRP2Q9NX02 1062 aa18.09■□□□□ 0.49
HDAC8-217ENST00000478743 AMIGO3Q86WK7 504 aa18.08■□□□□ 0.48
HDAC8-217ENST00000478743 CCNL1Q9UK58 526 aaPredicted RBP18.08■□□□□ 0.48
HDAC8-217ENST00000478743 PKD1L3Q7Z443 1732 aa18.07■□□□□ 0.48
HDAC8-217ENST00000478743 HSPA1AP0DMV8 641 aaKnown RBP18.07■□□□□ 0.48
HDAC8-217ENST00000478743 HSPA1BP0DMV9 641 aaKnown RBP18.07■□□□□ 0.48
HDAC8-217ENST00000478743 PRIM1P49642 420 aaKnown RBP18.07■□□□□ 0.48
HDAC8-217ENST00000478743 SMIM5Q71RC9 77 aa18.07■□□□□ 0.48
HDAC8-217ENST00000478743 DDX54Q8TDD1 881 aaKnown RBP18.07■□□□□ 0.48
HDAC8-217ENST00000478743 SYTL4Q96C24 671 aaPredicted RBP18.07■□□□□ 0.48
HDAC8-217ENST00000478743 ANKRD36BQ8N2N9 1353 aa18.06■□□□□ 0.48
HDAC8-217ENST00000478743 TTC21BQ7Z4L5 1316 aa18.06■□□□□ 0.48
HDAC8-217ENST00000478743 RBM46Q8TBY0 533 aaKnown RBP18.06■□□□□ 0.48
HDAC8-217ENST00000478743 KIAA1210Q9ULL0 1709 aa18.06■□□□□ 0.48
HDAC8-217ENST00000478743 UBR3Q6ZT12 1888 aa18.05■□□□□ 0.48
HDAC8-217ENST00000478743 KCNH5Q8NCM2 988 aa18.05■□□□□ 0.48
HDAC8-217ENST00000478743 FAM208AQ9UK61 1670 aaKnown RBP18.04■□□□□ 0.48
HDAC8-217ENST00000478743 KIF13BQ9NQT8 1826 aa18.04■□□□□ 0.48
HDAC8-217ENST00000478743 C4BP0C0L5 1744 aa18.03■□□□□ 0.48
HDAC8-217ENST00000478743 PXDNLA1KZ92 1463 aa18.03■□□□□ 0.48
HDAC8-217ENST00000478743 RGPD2P0DJD1 1756 aa18.03■□□□□ 0.48
HDAC8-217ENST00000478743 MON2Q7Z3U7 1717 aa18.03■□□□□ 0.48
HDAC8-217ENST00000478743 KCPQ6ZWJ8 1503 aa18.03■□□□□ 0.48
HDAC8-217ENST00000478743 BRCA1P38398 1863 aaKnown RBP18.01■□□□□ 0.47
HDAC8-217ENST00000478743 ANKRD24Q8TF21 1146 aa18.01■□□□□ 0.47
HDAC8-217ENST00000478743 NBPF1Q3BBV0 1214 aa18■□□□□ 0.47
HDAC8-217ENST00000478743 TNRC6CQ9HCJ0 1690 aaKnown RBP17.99■□□□□ 0.47
HDAC8-217ENST00000478743 CENPJQ9HC77 1338 aaPredicted RBP17.98■□□□□ 0.47
HDAC8-217ENST00000478743 MEGF6O75095 1541 aa17.98■□□□□ 0.47
HDAC8-217ENST00000478743 FSTL1Q12841 308 aa17.97■□□□□ 0.47
HDAC8-217ENST00000478743 USP47Q96K76 1375 aa17.95■□□□□ 0.46
HDAC8-217ENST00000478743 PHF14O94880 888 aa17.95■□□□□ 0.46
HDAC8-217ENST00000478743 TTC21AQ8NDW8 1320 aa17.95■□□□□ 0.46
HDAC8-217ENST00000478743 C16orf71Q8IYS4 520 aaPredicted RBP17.94■□□□□ 0.46
HDAC8-217ENST00000478743 BCS1LQ9Y276 419 aa17.93■□□□□ 0.46
HDAC8-217ENST00000478743 ARFGEF1Q9Y6D6 1849 aa17.93■□□□□ 0.46
HDAC8-217ENST00000478743 C10orf71Q711Q0 1435 aa17.92■□□□□ 0.46
HDAC8-217ENST00000478743 C9orf131Q5VYM1 1079 aa17.91■□□□□ 0.46
HDAC8-217ENST00000478743 ARHGAP27Q6ZUM4 889 aa17.91■□□□□ 0.46
HDAC8-217ENST00000478743 NME9Q86XW9 330 aa17.91■□□□□ 0.46
HDAC8-217ENST00000478743 USP31Q70CQ4 1352 aa17.91■□□□□ 0.46
HDAC8-217ENST00000478743 FAM161AQ3B820 660 aa17.9■□□□□ 0.46
HDAC8-217ENST00000478743 RRAGCQ9HB90 399 aa17.9■□□□□ 0.46
HDAC8-217ENST00000478743 PCDH10Q9P2E7 1040 aa17.9■□□□□ 0.46
HDAC8-217ENST00000478743 MAP2P11137 1827 aaKnown RBP17.9■□□□□ 0.46
HDAC8-217ENST00000478743 ITGB4P16144 1822 aa17.9■□□□□ 0.46
HDAC8-217ENST00000478743 KTN1Q86UP2 1357 aaKnown RBP17.9■□□□□ 0.46
HDAC8-217ENST00000478743 PALLDQ8WX93 1383 aa17.9■□□□□ 0.46
HDAC8-217ENST00000478743 SBF1O95248 1867 aa17.89■□□□□ 0.45
HDAC8-217ENST00000478743 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.89■□□□□ 0.45
HDAC8-217ENST00000478743 A0A0G2JLW4 131 aa17.89■□□□□ 0.45
HDAC8-217ENST00000478743 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.89■□□□□ 0.45
HDAC8-217ENST00000478743 FLAD1Q8NFF5 587 aa17.89■□□□□ 0.45
HDAC8-217ENST00000478743 LTV1Q96GA3 475 aaPredicted RBP17.89■□□□□ 0.45
HDAC8-217ENST00000478743 PLEKHG2Q9H7P9 1386 aa17.88■□□□□ 0.45
HDAC8-217ENST00000478743 STAC3Q96MF2 364 aa17.87■□□□□ 0.45
HDAC8-217ENST00000478743 CD163L1Q9NR16 1453 aa17.87■□□□□ 0.45
HDAC8-217ENST00000478743 AK7Q96M32 723 aa17.86■□□□□ 0.45
HDAC8-217ENST00000478743 ZNF692Q9BU19 519 aaPredicted RBP17.85■□□□□ 0.45
HDAC8-217ENST00000478743 RAB3GAP2Q9H2M9 1393 aa17.84■□□□□ 0.45
HDAC8-217ENST00000478743 SBNO2Q9Y2G9 1366 aa17.84■□□□□ 0.45
HDAC8-217ENST00000478743 MMP10P09238 476 aa17.84■□□□□ 0.45
HDAC8-217ENST00000478743 SMC1BQ8NDV3 1235 aa17.84■□□□□ 0.45
HDAC8-217ENST00000478743 ZCRB1Q8TBF4 217 aaKnown RBP17.84■□□□□ 0.45
HDAC8-217ENST00000478743 C4AP0C0L4 1744 aa17.84■□□□□ 0.45
HDAC8-217ENST00000478743 FOXN1O15353 648 aa17.83■□□□□ 0.44
HDAC8-217ENST00000478743 FCHSD2O94868 740 aa17.83■□□□□ 0.44
HDAC8-217ENST00000478743 DPEP1P16444 411 aa17.83■□□□□ 0.44
HDAC8-217ENST00000478743 EVC2Q86UK5 1308 aa17.82■□□□□ 0.44
HDAC8-217ENST00000478743 LINC00116Q8NCU8 138 aa17.82■□□□□ 0.44
HDAC8-217ENST00000478743 KDM2BQ8NHM5 1336 aa17.81■□□□□ 0.44
HDAC8-217ENST00000478743 RNF181Q9P0P0 153 aa17.81■□□□□ 0.44
HDAC8-217ENST00000478743 TIAM2Q8IVF5 1701 aa17.81■□□□□ 0.44
HDAC8-217ENST00000478743 KCNA3P22001 575 aa17.8■□□□□ 0.44
HDAC8-217ENST00000478743 SSFA2P28290 1259 aa17.79■□□□□ 0.44
HDAC8-217ENST00000478743 TGFB2P61812 414 aa17.79■□□□□ 0.44
HDAC8-217ENST00000478743 USHBP1Q8N6Y0 703 aa17.79■□□□□ 0.44
HDAC8-217ENST00000478743 IP6K1Q92551 441 aa17.79■□□□□ 0.44
HDAC8-217ENST00000478743 MPRIPQ6WCQ1 1025 aa17.78■□□□□ 0.44
HDAC8-217ENST00000478743 NSD3Q9BZ95 1437 aa17.78■□□□□ 0.44
HDAC8-217ENST00000478743 MKRN1Q9UHC7 482 aaKnown RBP17.77■□□□□ 0.44
HDAC8-217ENST00000478743 FBLN1P23142 703 aa17.76■□□□□ 0.43
HDAC8-217ENST00000478743 ITPK1Q13572 414 aa17.75■□□□□ 0.43
HDAC8-217ENST00000478743 GNPATO15228 680 aa17.74■□□□□ 0.43
HDAC8-217ENST00000478743 RASSF7Q02833 373 aa17.74■□□□□ 0.43
HDAC8-217ENST00000478743 DCAF5Q96JK2 942 aa17.74■□□□□ 0.43
HDAC8-217ENST00000478743 MAP3K19Q56UN5 1328 aa17.73■□□□□ 0.43
HDAC8-217ENST00000478743 HOXC9P31274 260 aa17.73■□□□□ 0.43
HDAC8-217ENST00000478743 VIRMAQ69YN4 1812 aaKnown RBP17.72■□□□□ 0.43
HDAC8-217ENST00000478743 CCDC88AQ3V6T2 1871 aa17.72■□□□□ 0.43
HDAC8-217ENST00000478743 NBPF6Q5VWK0 638 aa17.72■□□□□ 0.43
HDAC8-217ENST00000478743 ABHD8Q96I13 439 aa17.72■□□□□ 0.43
HDAC8-217ENST00000478743 NBPF4Q96M43 638 aa17.72■□□□□ 0.43
HDAC8-217ENST00000478743 PRDM10Q9NQV6 1147 aa17.72■□□□□ 0.43
HDAC8-217ENST00000478743 PIGBQ92521 554 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms