RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 AKT1S1Q96B36 256 aa22.03■■□□□ 1.12
GARNL3-215ENST00000478702 CDCA8Q53HL2 280 aa22.01■■□□□ 1.11
GARNL3-215ENST00000478702 DDX54Q8TDD1 881 aaKnown RBP22.01■■□□□ 1.11
GARNL3-215ENST00000478702 LTV1Q96GA3 475 aaPredicted RBP22.01■■□□□ 1.11
GARNL3-215ENST00000478702 NSD2O96028 1365 aa21.99■■□□□ 1.11
GARNL3-215ENST00000478702 FBLN1P23142 703 aa21.99■■□□□ 1.11
GARNL3-215ENST00000478702 MAP3K19Q56UN5 1328 aa21.99■■□□□ 1.11
GARNL3-215ENST00000478702 PNPLA7Q6ZV29 1317 aa21.99■■□□□ 1.11
GARNL3-215ENST00000478702 MEGF6O75095 1541 aa21.98■■□□□ 1.11
GARNL3-215ENST00000478702 SLC27A3Q5K4L6 730 aa21.98■■□□□ 1.11
GARNL3-215ENST00000478702 TAF1LQ8IZX4 1826 aa21.97■■□□□ 1.11
GARNL3-215ENST00000478702 HOXC9P31274 260 aa21.97■■□□□ 1.11
GARNL3-215ENST00000478702 KCNQ4P56696 695 aa21.97■■□□□ 1.11
GARNL3-215ENST00000478702 EIF4G2P78344 907 aaKnown RBP eCLIP21.97■■□□□ 1.11
GARNL3-215ENST00000478702 PRIM1P49642 420 aaKnown RBP21.95■■□□□ 1.1
GARNL3-215ENST00000478702 SLC16A10Q8TF71 515 aa21.95■■□□□ 1.1
GARNL3-215ENST00000478702 C5P01031 1676 aa21.95■■□□□ 1.1
GARNL3-215ENST00000478702 ANKRD26Q9UPS8 1709 aa21.94■■□□□ 1.1
GARNL3-215ENST00000478702 HSPA5P11021 654 aaKnown RBP21.94■■□□□ 1.1
GARNL3-215ENST00000478702 GOLGB1Q14789 3259 aaKnown RBP21.93■■□□□ 1.1
GARNL3-215ENST00000478702 SYTL4Q96C24 671 aaPredicted RBP21.93■■□□□ 1.1
GARNL3-215ENST00000478702 COG3Q96JB2 828 aa21.93■■□□□ 1.1
GARNL3-215ENST00000478702 ITGB4P16144 1822 aa21.92■■□□□ 1.1
GARNL3-215ENST00000478702 ZCRB1Q8TBF4 217 aaKnown RBP21.91■■□□□ 1.1
GARNL3-215ENST00000478702 AMPHP49418 695 aa21.9■■□□□ 1.1
GARNL3-215ENST00000478702 KLHL34Q8N239 644 aa21.9■■□□□ 1.1
GARNL3-215ENST00000478702 TFCP2L1Q9NZI6 479 aa21.9■■□□□ 1.1
GARNL3-215ENST00000478702 NSD3Q9BZ95 1437 aa21.89■■□□□ 1.1
GARNL3-215ENST00000478702 TOGARAM1Q9Y4F4 1720 aa21.89■■□□□ 1.1
GARNL3-215ENST00000478702 RTL1A6NKG5 1358 aa21.89■■□□□ 1.1
GARNL3-215ENST00000478702 POLD1P28340 1107 aa21.89■■□□□ 1.09
GARNL3-215ENST00000478702 GPR162Q16538 588 aa21.89■■□□□ 1.09
GARNL3-215ENST00000478702 NBPF6Q5VWK0 638 aa21.88■■□□□ 1.09
GARNL3-215ENST00000478702 NLGN2Q8NFZ4 835 aa21.88■■□□□ 1.09
GARNL3-215ENST00000478702 NBPF4Q96M43 638 aa21.88■■□□□ 1.09
GARNL3-215ENST00000478702 RRS1Q15050 365 aaKnown RBP21.87■■□□□ 1.09
GARNL3-215ENST00000478702 C1QTNF8P60827 252 aa21.86■■□□□ 1.09
GARNL3-215ENST00000478702 USHBP1Q8N6Y0 703 aa21.86■■□□□ 1.09
GARNL3-215ENST00000478702 CCNL1Q9UK58 526 aaPredicted RBP21.86■■□□□ 1.09
GARNL3-215ENST00000478702 FYB1O15117 783 aa21.85■■□□□ 1.09
GARNL3-215ENST00000478702 PKD1L3Q7Z443 1732 aa21.85■■□□□ 1.09
GARNL3-215ENST00000478702 COL23A1Q86Y22 540 aaPredicted RBP21.84■■□□□ 1.09
GARNL3-215ENST00000478702 CARD14Q9BXL6 1004 aa21.84■■□□□ 1.09
GARNL3-215ENST00000478702 GGNBP2Q9H3C7 697 aa21.84■■□□□ 1.09
GARNL3-215ENST00000478702 UBR3Q6ZT12 1888 aa21.83■■□□□ 1.09
GARNL3-215ENST00000478702 SENP3-EIF4A1A0A087X0R7 540 aa21.82■■□□□ 1.08
GARNL3-215ENST00000478702 PELP1Q8IZL8 1130 aaKnown RBP21.82■■□□□ 1.08
GARNL3-215ENST00000478702 CGNL1Q0VF96 1302 aa21.81■■□□□ 1.08
GARNL3-215ENST00000478702 C4BP0C0L5 1744 aa21.81■■□□□ 1.08
GARNL3-215ENST00000478702 MAP2P11137 1827 aaKnown RBP21.81■■□□□ 1.08
GARNL3-215ENST00000478702 YBX3P16989 372 aaKnown RBP eCLIP21.8■■□□□ 1.08
GARNL3-215ENST00000478702 POLR3GLQ9BT43 218 aa21.8■■□□□ 1.08
GARNL3-215ENST00000478702 SMG6Q86US8 1419 aaKnown RBP21.8■■□□□ 1.08
GARNL3-215ENST00000478702 INSRP06213 1382 aa21.79■■□□□ 1.08
GARNL3-215ENST00000478702 HSP90AB2PQ58FF8 381 aa21.79■■□□□ 1.08
GARNL3-215ENST00000478702 RAPGEF4Q8WZA2 1011 aa21.78■■□□□ 1.08
GARNL3-215ENST00000478702 MSH5O43196 834 aa21.77■■□□□ 1.08
GARNL3-215ENST00000478702 TATP17735 454 aaPredicted RBP21.77■■□□□ 1.08
GARNL3-215ENST00000478702 MSL1Q68DK7 614 aa21.77■■□□□ 1.08
GARNL3-215ENST00000478702 FLT4P35916 1363 aa21.76■■□□□ 1.07
GARNL3-215ENST00000478702 PCDH11XQ9BZA7 1347 aa21.76■■□□□ 1.07
GARNL3-215ENST00000478702 PCDH11YQ9BZA8 1340 aa21.76■■□□□ 1.07
GARNL3-215ENST00000478702 PALLDQ8WX93 1383 aa21.75■■□□□ 1.07
GARNL3-215ENST00000478702 KIF24Q5T7B8 1368 aa21.74■■□□□ 1.07
GARNL3-215ENST00000478702 NCAPD2Q15021 1401 aa21.74■■□□□ 1.07
GARNL3-215ENST00000478702 CYP27B1O15528 508 aa21.74■■□□□ 1.07
GARNL3-215ENST00000478702 GIGYF1O75420 1035 aaPredicted RBP21.74■■□□□ 1.07
GARNL3-215ENST00000478702 KIF7Q2M1P5 1343 aa21.73■■□□□ 1.07
GARNL3-215ENST00000478702 MPRIPQ6WCQ1 1025 aa21.72■■□□□ 1.07
GARNL3-215ENST00000478702 AMIGO3Q86WK7 504 aa21.72■■□□□ 1.07
GARNL3-215ENST00000478702 GRIN3BO60391 1043 aa21.71■■□□□ 1.07
GARNL3-215ENST00000478702 PANK3Q9H999 370 aa21.7■■□□□ 1.06
GARNL3-215ENST00000478702 EMILIN1Q9Y6C2 1016 aa21.7■■□□□ 1.06
GARNL3-215ENST00000478702 FLAD1Q8NFF5 587 aa21.68■■□□□ 1.06
GARNL3-215ENST00000478702 CD2APQ9Y5K6 639 aa21.68■■□□□ 1.06
GARNL3-215ENST00000478702 ATP10DQ9P241 1426 aa21.67■■□□□ 1.06
GARNL3-215ENST00000478702 SMIM5Q71RC9 77 aa21.67■■□□□ 1.06
GARNL3-215ENST00000478702 PIGBQ92521 554 aa21.66■■□□□ 1.06
GARNL3-215ENST00000478702 KIF13BQ9NQT8 1826 aa21.66■■□□□ 1.06
GARNL3-215ENST00000478702 NKX1-1Q15270 411 aaPredicted RBP21.65■■□□□ 1.06
GARNL3-215ENST00000478702 SMARCC1Q92922 1105 aaPredicted RBP21.65■■□□□ 1.06
GARNL3-215ENST00000478702 KIAA1551Q9HCM1 1747 aa21.65■■□□□ 1.06
GARNL3-215ENST00000478702 ADCY9O60503 1353 aa21.64■■□□□ 1.06
GARNL3-215ENST00000478702 HMGB2P26583 209 aaKnown RBP21.63■■□□□ 1.05
GARNL3-215ENST00000478702 AK7Q96M32 723 aa21.63■■□□□ 1.05
GARNL3-215ENST00000478702 PHF14O94880 888 aa21.62■■□□□ 1.05
GARNL3-215ENST00000478702 LINC00116Q8NCU8 138 aa21.62■■□□□ 1.05
GARNL3-215ENST00000478702 CEP350Q5VT06 3117 aa21.62■■□□□ 1.05
GARNL3-215ENST00000478702 N4BP2Q86UW6 1770 aaPredicted RBP21.61■■□□□ 1.05
GARNL3-215ENST00000478702 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.61■■□□□ 1.05
GARNL3-215ENST00000478702 EYA1Q99502 592 aa21.61■■□□□ 1.05
GARNL3-215ENST00000478702 COL5A3P25940 1745 aaPredicted RBP21.6■■□□□ 1.05
GARNL3-215ENST00000478702 WASHC2AQ641Q2 1341 aa21.6■■□□□ 1.05
GARNL3-215ENST00000478702 ZNF831Q5JPB2 1677 aa21.6■■□□□ 1.05
GARNL3-215ENST00000478702 LOC102724428A0A0B4J2F2 783 aa21.6■■□□□ 1.05
GARNL3-215ENST00000478702 SIK1P57059 783 aa21.6■■□□□ 1.05
GARNL3-215ENST00000478702 IGSF1Q8N6C5 1336 aa21.59■■□□□ 1.05
GARNL3-215ENST00000478702 PPM1GO15355 546 aaPredicted RBP21.59■■□□□ 1.05
GARNL3-215ENST00000478702 SPG7Q9UQ90 795 aa21.59■■□□□ 1.05
GARNL3-215ENST00000478702 SSFA2P28290 1259 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms