RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 PRICKLE2Q7Z3G6 844 aa8.57□□□□□ -1.04
HPS3-205ENST00000478525 GJD4Q96KN9 370 aaPredicted RBP8.57□□□□□ -1.04
HPS3-205ENST00000478525 PCMTD1Q96MG8 357 aaPredicted RBP8.57□□□□□ -1.04
HPS3-205ENST00000478525 RNF144AP50876 292 aaPredicted RBP8.56□□□□□ -1.04
HPS3-205ENST00000478525 GOPCQ9HD26 462 aa8.56□□□□□ -1.04
HPS3-205ENST00000478525 ATP5J2-PTCD1G3V325 749 aa8.55□□□□□ -1.04
HPS3-205ENST00000478525 TMEM259Q4ZIN3 620 aa8.55□□□□□ -1.04
HPS3-205ENST00000478525 LYPD4Q6UWN0 246 aa8.55□□□□□ -1.04
HPS3-205ENST00000478525 ZNF837Q96EG3 531 aaPredicted RBP8.55□□□□□ -1.04
HPS3-205ENST00000478525 IRS1P35568 1242 aa8.54□□□□□ -1.04
HPS3-205ENST00000478525 SRSF11Q05519 484 aaKnown RBP8.54□□□□□ -1.04
HPS3-205ENST00000478525 BCANQ96GW7 911 aa8.54□□□□□ -1.04
HPS3-205ENST00000478525 MEN1O00255 615 aa8.53□□□□□ -1.04
HPS3-205ENST00000478525 ERVK-9P63128 1117 aa8.53□□□□□ -1.04
HPS3-205ENST00000478525 GPR25O00155 361 aa8.52□□□□□ -1.05
HPS3-205ENST00000478525 GPC1P35052 558 aa8.52□□□□□ -1.05
HPS3-205ENST00000478525 A0A1W2PRU2 124 aa8.51□□□□□ -1.05
HPS3-205ENST00000478525 SCTRP47872 440 aa8.51□□□□□ -1.05
HPS3-205ENST00000478525 MARSP56192 900 aaKnown RBP8.51□□□□□ -1.05
HPS3-205ENST00000478525 CC2D2BQ6DHV5 1058 aa8.51□□□□□ -1.05
HPS3-205ENST00000478525 TRIM22Q8IYM9 498 aa8.51□□□□□ -1.05
HPS3-205ENST00000478525 TRIM52Q96A61 297 aa8.51□□□□□ -1.05
HPS3-205ENST00000478525 GPR37L1O60883 481 aa8.5□□□□□ -1.05
HPS3-205ENST00000478525 CELA2BP08218 269 aaPredicted RBP8.5□□□□□ -1.05
HPS3-205ENST00000478525 MAP3K10Q02779 954 aa8.49□□□□□ -1.05
HPS3-205ENST00000478525 DBN1Q16643 649 aa8.49□□□□□ -1.05
HPS3-205ENST00000478525 RIPOR1Q6ZS17 1223 aa8.49□□□□□ -1.05
HPS3-205ENST00000478525 MBIPQ9NS73 344 aa8.49□□□□□ -1.05
HPS3-205ENST00000478525 DNMT3AQ9Y6K1 912 aaPredicted RBP8.49□□□□□ -1.05
HPS3-205ENST00000478525 POU4F2Q12837 409 aa8.48□□□□□ -1.05
HPS3-205ENST00000478525 NR1H3Q13133 447 aa8.48□□□□□ -1.05
HPS3-205ENST00000478525 NEUROD2Q15784 382 aa8.48□□□□□ -1.05
HPS3-205ENST00000478525 CYP2U1Q7Z449 544 aa8.48□□□□□ -1.05
HPS3-205ENST00000478525 CCDC125Q86Z20 511 aa8.48□□□□□ -1.05
HPS3-205ENST00000478525 IL27Q8NEV9 243 aa8.48□□□□□ -1.05
HPS3-205ENST00000478525 SCARF2Q96GP6 870 aaPredicted RBP8.48□□□□□ -1.05
HPS3-205ENST00000478525 GMCL1Q96IK5 515 aa8.48□□□□□ -1.05
HPS3-205ENST00000478525 DYRK1BQ9Y463 629 aa8.48□□□□□ -1.05
HPS3-205ENST00000478525 CLN3Q13286 438 aa8.47□□□□□ -1.05
HPS3-205ENST00000478525 SLC27A3Q5K4L6 730 aa8.47□□□□□ -1.05
HPS3-205ENST00000478525 RNF20Q5VTR2 975 aa8.47□□□□□ -1.05
HPS3-205ENST00000478525 GPAT2Q6NUI2 795 aa8.47□□□□□ -1.05
HPS3-205ENST00000478525 KANK3Q6NY19 840 aa8.47□□□□□ -1.05
HPS3-205ENST00000478525 GTPBP3Q969Y2 492 aaKnown RBP8.47□□□□□ -1.05
HPS3-205ENST00000478525 OSBPL3Q9H4L5 887 aa8.47□□□□□ -1.05
HPS3-205ENST00000478525 ARHGEF10LQ9HCE6 1279 aa8.47□□□□□ -1.05
HPS3-205ENST00000478525 PCDHB11Q9Y5F2 797 aa8.47□□□□□ -1.05
HPS3-205ENST00000478525 IGF1RP08069 1367 aa8.47□□□□□ -1.05
HPS3-205ENST00000478525 NBPF10Q6P3W6 841 aaKnown RBP8.46□□□□□ -1.06
HPS3-205ENST00000478525 NBPF15Q8N660 670 aa8.46□□□□□ -1.06
HPS3-205ENST00000478525 NLRP3Q96P20 1036 aa8.46□□□□□ -1.06
HPS3-205ENST00000478525 GAS2L1Q99501 681 aaPredicted RBP8.46□□□□□ -1.06
HPS3-205ENST00000478525 GRIP2Q9C0E4 1043 aa8.46□□□□□ -1.06
HPS3-205ENST00000478525 TRAK2O60296 914 aa8.45□□□□□ -1.06
HPS3-205ENST00000478525 FOXR1Q6PIV2 292 aa8.45□□□□□ -1.06
HPS3-205ENST00000478525 MTMR14Q8NCE2 650 aa8.45□□□□□ -1.06
HPS3-205ENST00000478525 SPATA31C2B4DYI2 1134 aa8.44□□□□□ -1.06
HPS3-205ENST00000478525 H7C1W4 665 aa8.44□□□□□ -1.06
HPS3-205ENST00000478525 MCCD1P59942 119 aaPredicted RBP8.44□□□□□ -1.06
HPS3-205ENST00000478525 RAB6BQ9NRW1 208 aa8.44□□□□□ -1.06
HPS3-205ENST00000478525 ENAMQ9NRM1 1142 aa8.43□□□□□ -1.06
HPS3-205ENST00000478525 NDUFB9Q9Y6M9 179 aa8.43□□□□□ -1.06
HPS3-205ENST00000478525 SOCS7O14512 581 aa8.42□□□□□ -1.06
HPS3-205ENST00000478525 ZNF592Q92610 1267 aa8.42□□□□□ -1.06
HPS3-205ENST00000478525 ACDQ96AP0 544 aa8.42□□□□□ -1.06
HPS3-205ENST00000478525 ZNF330Q9Y3S2 320 aaPredicted RBP8.42□□□□□ -1.06
HPS3-205ENST00000478525 WASLO00401 505 aaPredicted RBP8.41□□□□□ -1.06
HPS3-205ENST00000478525 BCRP11274 1271 aa8.41□□□□□ -1.06
HPS3-205ENST00000478525 TAS1R3Q7RTX0 852 aa8.41□□□□□ -1.06
HPS3-205ENST00000478525 BANK1Q8NDB2 785 aa8.41□□□□□ -1.06
HPS3-205ENST00000478525 TRERF1Q96PN7 1200 aa8.41□□□□□ -1.06
HPS3-205ENST00000478525 TIMMDC1Q9NPL8 285 aa8.41□□□□□ -1.06
HPS3-205ENST00000478525 CNTNAP5Q8WYK1 1306 aa8.4□□□□□ -1.06
HPS3-205ENST00000478525 IL2RAP01589 272 aa8.4□□□□□ -1.06
HPS3-205ENST00000478525 IGHA1P01876 353 aa8.4□□□□□ -1.06
HPS3-205ENST00000478525 THBS1P07996 1170 aa8.4□□□□□ -1.06
HPS3-205ENST00000478525 BRPF1P55201 1214 aaPredicted RBP8.4□□□□□ -1.06
HPS3-205ENST00000478525 FOXK2Q01167 660 aa8.4□□□□□ -1.06
HPS3-205ENST00000478525 WDR44Q5JSH3 913 aa8.4□□□□□ -1.06
HPS3-205ENST00000478525 NUCKS1Q9H1E3 243 aaKnown RBP8.4□□□□□ -1.06
HPS3-205ENST00000478525 F11P03951 625 aa8.39□□□□□ -1.07
HPS3-205ENST00000478525 MX2P20592 715 aa8.39□□□□□ -1.07
HPS3-205ENST00000478525 CCDC85AQ96PX6 553 aaPredicted RBP8.39□□□□□ -1.07
HPS3-205ENST00000478525 SNRKQ9NRH2 765 aa8.39□□□□□ -1.07
HPS3-205ENST00000478525 GNRH1P01148 92 aa8.38□□□□□ -1.07
HPS3-205ENST00000478525 NEDD1Q8NHV4 660 aa8.38□□□□□ -1.07
HPS3-205ENST00000478525 CNKSR1Q969H4 720 aa8.38□□□□□ -1.07
HPS3-205ENST00000478525 ESYT1Q9BSJ8 1104 aa8.38□□□□□ -1.07
HPS3-205ENST00000478525 CDCA7Q9BWT1 371 aaPredicted RBP8.38□□□□□ -1.07
HPS3-205ENST00000478525 ESF1Q9H501 851 aaKnown RBP8.38□□□□□ -1.07
HPS3-205ENST00000478525 GPAMQ9HCL2 828 aa8.38□□□□□ -1.07
HPS3-205ENST00000478525 PHF20L1A8MW92 1017 aa8.37□□□□□ -1.07
HPS3-205ENST00000478525 CENPCQ03188 943 aa8.37□□□□□ -1.07
HPS3-205ENST00000478525 DCAF5Q96JK2 942 aa8.37□□□□□ -1.07
HPS3-205ENST00000478525 HRH3Q9Y5N1 445 aa8.37□□□□□ -1.07
HPS3-205ENST00000478525 PHKA2P46019 1235 aa8.36□□□□□ -1.07
HPS3-205ENST00000478525 PLA2G4EQ3MJ16 856 aa8.36□□□□□ -1.07
HPS3-205ENST00000478525 PODNQ7Z5L7 613 aa8.36□□□□□ -1.07
HPS3-205ENST00000478525 CEP126Q9P2H0 1117 aa8.36□□□□□ -1.07
HPS3-205ENST00000478525 MYCP01106 439 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms