RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 LINC00528Q8N1L1 170 aa7.68□□□□□ -1.18
GPNMB-210ENST00000478451 ZNF592Q92610 1267 aa7.68□□□□□ -1.18
GPNMB-210ENST00000478451 ERVH48-1M5A8F1 160 aa7.67□□□□□ -1.18
GPNMB-210ENST00000478451 GIGYF1O75420 1035 aaPredicted RBP7.67□□□□□ -1.18
GPNMB-210ENST00000478451 UPP2O95045 317 aa7.67□□□□□ -1.18
GPNMB-210ENST00000478451 ABL2P42684 1182 aa7.67□□□□□ -1.18
GPNMB-210ENST00000478451 CBLBQ13191 982 aa7.67□□□□□ -1.18
GPNMB-210ENST00000478451 PLA2G4EQ3MJ16 856 aa7.67□□□□□ -1.18
GPNMB-210ENST00000478451 C6orf118Q5T5N4 469 aa7.67□□□□□ -1.18
GPNMB-210ENST00000478451 TMPRSS4Q9NRS4 437 aa7.67□□□□□ -1.18
GPNMB-210ENST00000478451 BMP2P12643 396 aa7.66□□□□□ -1.18
GPNMB-210ENST00000478451 Q6ZVU0 165 aa7.66□□□□□ -1.18
GPNMB-210ENST00000478451 ZNF784Q8NCA9 323 aaPredicted RBP7.66□□□□□ -1.18
GPNMB-210ENST00000478451 NANOS1Q8WY41 292 aaKnown RBP7.66□□□□□ -1.18
GPNMB-210ENST00000478451 COL25A1Q9BXS0 654 aaPredicted RBP7.66□□□□□ -1.18
GPNMB-210ENST00000478451 K7ELQ4 463 aaPredicted RBP7.65□□□□□ -1.18
GPNMB-210ENST00000478451 FLIIQ13045 1269 aa7.65□□□□□ -1.18
GPNMB-210ENST00000478451 TSEN34Q9BSV6 310 aaKnown RBP7.65□□□□□ -1.18
GPNMB-210ENST00000478451 COG6Q9Y2V7 657 aa7.65□□□□□ -1.18
GPNMB-210ENST00000478451 VAC14Q08AM6 782 aa7.64□□□□□ -1.19
GPNMB-210ENST00000478451 RNF20Q5VTR2 975 aa7.64□□□□□ -1.19
GPNMB-210ENST00000478451 PROCP04070 461 aa7.63□□□□□ -1.19
GPNMB-210ENST00000478451 EIF4G2P78344 907 aaKnown RBP eCLIP7.63□□□□□ -1.19
GPNMB-210ENST00000478451 CCDC125Q86Z20 511 aa7.63□□□□□ -1.19
GPNMB-210ENST00000478451 WHAMMQ8TF30 809 aa7.63□□□□□ -1.19
GPNMB-210ENST00000478451 CYLDQ9NQC7 956 aa7.63□□□□□ -1.19
GPNMB-210ENST00000478451 LILRA1O75019 489 aa7.62□□□□□ -1.19
GPNMB-210ENST00000478451 WASHC4Q2M389 1173 aa7.62□□□□□ -1.19
GPNMB-210ENST00000478451 TRIM52Q96A61 297 aa7.62□□□□□ -1.19
GPNMB-210ENST00000478451 POM121Q96HA1 1249 aa7.62□□□□□ -1.19
GPNMB-210ENST00000478451 AGBL1Q96MI9 1066 aa7.62□□□□□ -1.19
GPNMB-210ENST00000478451 ADH1AP07327 375 aa7.61□□□□□ -1.19
GPNMB-210ENST00000478451 UBTFP17480 764 aaKnown RBP7.61□□□□□ -1.19
GPNMB-210ENST00000478451 ADD1P35611 737 aaKnown RBP7.61□□□□□ -1.19
GPNMB-210ENST00000478451 RELBQ01201 579 aa7.61□□□□□ -1.19
GPNMB-210ENST00000478451 DCAF5Q96JK2 942 aa7.61□□□□□ -1.19
GPNMB-210ENST00000478451 KRTAP4-12Q9BQ66 201 aa7.61□□□□□ -1.19
GPNMB-210ENST00000478451 CEP126Q9P2H0 1117 aa7.61□□□□□ -1.19
GPNMB-210ENST00000478451 SOS2Q07890 1332 aaPredicted RBP7.6□□□□□ -1.19
GPNMB-210ENST00000478451 SPINT1O43278 529 aa7.6□□□□□ -1.19
GPNMB-210ENST00000478451 RAD21O60216 631 aa7.6□□□□□ -1.19
GPNMB-210ENST00000478451 ITGB2P05107 769 aa7.6□□□□□ -1.19
GPNMB-210ENST00000478451 GALNT6Q8NCL4 622 aa7.6□□□□□ -1.19
GPNMB-210ENST00000478451 PCDHB11Q9Y5F2 797 aa7.6□□□□□ -1.19
GPNMB-210ENST00000478451 BTBD11A6QL63 1104 aa7.59□□□□□ -1.19
GPNMB-210ENST00000478451 ERVK-9P63128 1117 aa7.59□□□□□ -1.19
GPNMB-210ENST00000478451 RNFT1Q5M7Z0 435 aa7.59□□□□□ -1.19
GPNMB-210ENST00000478451 TTLL8A6PVC2 850 aa7.58□□□□□ -1.2
GPNMB-210ENST00000478451 PHF20L1A8MW92 1017 aa7.58□□□□□ -1.2
GPNMB-210ENST00000478451 CC2D2BQ6DHV5 1058 aa7.58□□□□□ -1.2
GPNMB-210ENST00000478451 WWC1Q8IX03 1113 aa7.58□□□□□ -1.2
GPNMB-210ENST00000478451 DNMT3LQ9UJW3 386 aa7.58□□□□□ -1.2
GPNMB-210ENST00000478451 SOX11P35716 441 aa7.57□□□□□ -1.2
GPNMB-210ENST00000478451 PTGIRP43119 386 aa7.57□□□□□ -1.2
GPNMB-210ENST00000478451 SCTRP47872 440 aa7.57□□□□□ -1.2
GPNMB-210ENST00000478451 KDF1Q8NAX2 398 aaPredicted RBP7.57□□□□□ -1.2
GPNMB-210ENST00000478451 CCDC85AQ96PX6 553 aaPredicted RBP7.57□□□□□ -1.2
GPNMB-210ENST00000478451 INSM2Q96T92 566 aaPredicted RBP7.57□□□□□ -1.2
GPNMB-210ENST00000478451 ZNF395Q9H8N7 513 aaPredicted RBP7.57□□□□□ -1.2
GPNMB-210ENST00000478451 ATP5J2-PTCD1G3V325 749 aa7.56□□□□□ -1.2
GPNMB-210ENST00000478451 SEMA3FQ13275 785 aa7.56□□□□□ -1.2
GPNMB-210ENST00000478451 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.56□□□□□ -1.2
GPNMB-210ENST00000478451 SLFNL1Q499Z3 407 aa7.56□□□□□ -1.2
GPNMB-210ENST00000478451 RNF135Q8IUD6 432 aa7.56□□□□□ -1.2
GPNMB-210ENST00000478451 POLMQ9NP87 494 aaPredicted RBP7.56□□□□□ -1.2
GPNMB-210ENST00000478451 CTSOP43234 321 aaPredicted RBP7.55□□□□□ -1.2
GPNMB-210ENST00000478451 MAP3K10Q02779 954 aa7.55□□□□□ -1.2
GPNMB-210ENST00000478451 CYP2U1Q7Z449 544 aa7.55□□□□□ -1.2
GPNMB-210ENST00000478451 PHTF2Q8N3S3 785 aa7.55□□□□□ -1.2
GPNMB-210ENST00000478451 DOLKQ9UPQ8 538 aa7.55□□□□□ -1.2
GPNMB-210ENST00000478451 GTF3C3Q9Y5Q9 886 aa7.55□□□□□ -1.2
GPNMB-210ENST00000478451 FIGNL2A6NMB9 653 aa7.54□□□□□ -1.2
GPNMB-210ENST00000478451 CDCA7Q9BWT1 371 aaPredicted RBP7.54□□□□□ -1.2
GPNMB-210ENST00000478451 KRTAP9-9Q9BYP9 154 aa7.54□□□□□ -1.2
GPNMB-210ENST00000478451 KRTAP9-4Q9BYQ2 154 aa7.54□□□□□ -1.2
GPNMB-210ENST00000478451 OSBPL3Q9H4L5 887 aa7.54□□□□□ -1.2
GPNMB-210ENST00000478451 ESF1Q9H501 851 aaKnown RBP7.54□□□□□ -1.2
GPNMB-210ENST00000478451 ENAMQ9NRM1 1142 aa7.54□□□□□ -1.2
GPNMB-210ENST00000478451 TRAK2O60296 914 aa7.53□□□□□ -1.2
GPNMB-210ENST00000478451 MYCP01106 439 aaPredicted RBP7.53□□□□□ -1.2
GPNMB-210ENST00000478451 PTSQ03393 145 aa7.53□□□□□ -1.2
GPNMB-210ENST00000478451 FOXD4L5Q5VV16 416 aaPredicted RBP7.53□□□□□ -1.2
GPNMB-210ENST00000478451 RNF217Q8TC41 542 aa7.53□□□□□ -1.2
GPNMB-210ENST00000478451 TSGA10IPQ3SY00 556 aa7.52□□□□□ -1.21
GPNMB-210ENST00000478451 OXLD1Q5BKU9 147 aa7.52□□□□□ -1.21
GPNMB-210ENST00000478451 CLUAP1Q96AJ1 413 aa7.52□□□□□ -1.21
GPNMB-210ENST00000478451 KRTAP4-8A0A0G2JLE6 195 aa7.51□□□□□ -1.21
GPNMB-210ENST00000478451 POM121CA8CG34 1229 aa7.51□□□□□ -1.21
GPNMB-210ENST00000478451 MEN1O00255 615 aa7.51□□□□□ -1.21
GPNMB-210ENST00000478451 LYPD4Q6UWN0 246 aa7.51□□□□□ -1.21
GPNMB-210ENST00000478451 BEND7Q8N7W2 519 aaPredicted RBP7.51□□□□□ -1.21
GPNMB-210ENST00000478451 ALG2Q9H553 416 aa7.51□□□□□ -1.21
GPNMB-210ENST00000478451 CHIC2Q9UKJ5 165 aa7.51□□□□□ -1.21
GPNMB-210ENST00000478451 A0A1W2PRU2 124 aa7.5□□□□□ -1.21
GPNMB-210ENST00000478451 ADAMTS2O95450 1211 aa7.5□□□□□ -1.21
GPNMB-210ENST00000478451 BAG6P46379 1132 aa7.5□□□□□ -1.21
GPNMB-210ENST00000478451 PROSER2Q86WR7 435 aaPredicted RBP7.5□□□□□ -1.21
GPNMB-210ENST00000478451 PLPP7Q8NBV4 271 aa7.5□□□□□ -1.21
GPNMB-210ENST00000478451 ARHGEF10LQ9HCE6 1279 aa7.5□□□□□ -1.21
GPNMB-210ENST00000478451 PIK3CDO00329 1044 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms