RNA–Protein interactions for RNA: ENST00000478440.1

ITGA4-209, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,144 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-209ENST00000478440 ADD1P35611 737 aaKnown RBP10.87□□□□□ -0.67
ITGA4-209ENST00000478440 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.87□□□□□ -0.67
ITGA4-209ENST00000478440 POM121Q96HA1 1249 aa10.87□□□□□ -0.67
ITGA4-209ENST00000478440 AGBL1Q96MI9 1066 aa10.87□□□□□ -0.67
ITGA4-209ENST00000478440 UNC13AQ9UPW8 1703 aa10.87□□□□□ -0.67
ITGA4-209ENST00000478440 MAP7D1Q3KQU3 841 aa10.86□□□□□ -0.67
ITGA4-209ENST00000478440 SLC16A10Q8TF71 515 aa10.86□□□□□ -0.67
ITGA4-209ENST00000478440 NXF1Q9UBU9 619 aaKnown RBP10.86□□□□□ -0.67
ITGA4-209ENST00000478440 DOLKQ9UPQ8 538 aa10.86□□□□□ -0.67
ITGA4-209ENST00000478440 USP4Q13107 963 aa10.85□□□□□ -0.67
ITGA4-209ENST00000478440 POLMQ9NP87 494 aaPredicted RBP10.85□□□□□ -0.67
ITGA4-209ENST00000478440 TERTO14746 1132 aaKnown RBP10.84□□□□□ -0.67
ITGA4-209ENST00000478440 PHTF2Q8N3S3 785 aa10.84□□□□□ -0.67
ITGA4-209ENST00000478440 CCDC85AQ96PX6 553 aaPredicted RBP10.83□□□□□ -0.68
ITGA4-209ENST00000478440 INSM2Q96T92 566 aaPredicted RBP10.83□□□□□ -0.68
ITGA4-209ENST00000478440 ZNF395Q9H8N7 513 aaPredicted RBP10.83□□□□□ -0.68
ITGA4-209ENST00000478440 GPC1P35052 558 aa10.82□□□□□ -0.68
ITGA4-209ENST00000478440 DNMT3LQ9UJW3 386 aa10.82□□□□□ -0.68
ITGA4-209ENST00000478440 CHIC2Q9UKJ5 165 aa10.82□□□□□ -0.68
ITGA4-209ENST00000478440 TRAK2O60296 914 aa10.81□□□□□ -0.68
ITGA4-209ENST00000478440 LZTS3O60299 673 aaPredicted RBP10.81□□□□□ -0.68
ITGA4-209ENST00000478440 GNRH1P01148 92 aa10.81□□□□□ -0.68
ITGA4-209ENST00000478440 PROSER2Q86WR7 435 aaPredicted RBP10.81□□□□□ -0.68
ITGA4-209ENST00000478440 NFATC2IPQ8NCF5 419 aa10.81□□□□□ -0.68
ITGA4-209ENST00000478440 NLRP3Q96P20 1036 aa10.81□□□□□ -0.68
ITGA4-209ENST00000478440 ALG2Q9H553 416 aa10.81□□□□□ -0.68
ITGA4-209ENST00000478440 A6NJR5 290 aa10.8□□□□□ -0.68
ITGA4-209ENST00000478440 SCTRP47872 440 aa10.8□□□□□ -0.68
ITGA4-209ENST00000478440 OSBPL3Q9H4L5 887 aa10.8□□□□□ -0.68
ITGA4-209ENST00000478440 CTSOP43234 321 aaPredicted RBP10.79□□□□□ -0.68
ITGA4-209ENST00000478440 RNF144AP50876 292 aaPredicted RBP10.79□□□□□ -0.68
ITGA4-209ENST00000478440 KDF1Q8NAX2 398 aaPredicted RBP10.79□□□□□ -0.68
ITGA4-209ENST00000478440 PLPP7Q8NBV4 271 aa10.79□□□□□ -0.68
ITGA4-209ENST00000478440 A0A1W2PRU2 124 aa10.78□□□□□ -0.68
ITGA4-209ENST00000478440 FIGNL2A6NMB9 653 aa10.78□□□□□ -0.68
ITGA4-209ENST00000478440 SOBPA7XYQ1 873 aa10.78□□□□□ -0.68
ITGA4-209ENST00000478440 MEN1O00255 615 aa10.78□□□□□ -0.68
ITGA4-209ENST00000478440 CLN3Q13286 438 aa10.78□□□□□ -0.68
ITGA4-209ENST00000478440 OXLD1Q5BKU9 147 aa10.77□□□□□ -0.69
ITGA4-209ENST00000478440 ESCO1Q5FWF5 840 aa10.77□□□□□ -0.69
ITGA4-209ENST00000478440 RNF217Q8TC41 542 aa10.77□□□□□ -0.69
ITGA4-209ENST00000478440 CLUAP1Q96AJ1 413 aa10.77□□□□□ -0.69
ITGA4-209ENST00000478440 CDCA7Q9BWT1 371 aaPredicted RBP10.77□□□□□ -0.69
ITGA4-209ENST00000478440 LYSMD3Q7Z3D4 306 aa10.76□□□□□ -0.69
ITGA4-209ENST00000478440 IRF7Q92985 503 aa10.76□□□□□ -0.69
ITGA4-209ENST00000478440 H3BM21 787 aa10.75□□□□□ -0.69
ITGA4-209ENST00000478440 EML3Q32P44 896 aa10.75□□□□□ -0.69
ITGA4-209ENST00000478440 SKIP12755 728 aa10.74□□□□□ -0.69
ITGA4-209ENST00000478440 GTF2E1P29083 439 aaPredicted RBP10.74□□□□□ -0.69
ITGA4-209ENST00000478440 PTSQ03393 145 aa10.74□□□□□ -0.69
ITGA4-209ENST00000478440 SLC27A3Q5K4L6 730 aa10.74□□□□□ -0.69
ITGA4-209ENST00000478440 HDGFL1Q5TGJ6 251 aa10.74□□□□□ -0.69
ITGA4-209ENST00000478440 FOXD4L5Q5VV16 416 aaPredicted RBP10.74□□□□□ -0.69
ITGA4-209ENST00000478440 FNBP4Q8N3X1 1017 aaPredicted RBP10.74□□□□□ -0.69
ITGA4-209ENST00000478440 ARHGEF10LQ9HCE6 1279 aa10.74□□□□□ -0.69
ITGA4-209ENST00000478440 ESYT1Q9BSJ8 1104 aa10.73□□□□□ -0.69
ITGA4-209ENST00000478440 POM121CA8CG34 1229 aa10.72□□□□□ -0.69
ITGA4-209ENST00000478440 TSGA10IPQ3SY00 556 aa10.72□□□□□ -0.69
ITGA4-209ENST00000478440 NOD1Q9Y239 953 aa10.72□□□□□ -0.69
ITGA4-209ENST00000478440 PPFIA3O75145 1194 aa10.71□□□□□ -0.69
ITGA4-209ENST00000478440 ZSCAN1Q8NBB4 408 aa10.71□□□□□ -0.69
ITGA4-209ENST00000478440 CNKSR1Q969H4 720 aa10.71□□□□□ -0.69
ITGA4-209ENST00000478440 LORP23490 312 aaPredicted RBP10.7□□□□□ -0.7
ITGA4-209ENST00000478440 WDR44Q5JSH3 913 aa10.7□□□□□ -0.7
ITGA4-209ENST00000478440 XAGE2Q96GT9 111 aa10.7□□□□□ -0.7
ITGA4-209ENST00000478440 SLC35F4A4IF30 521 aa10.69□□□□□ -0.7
ITGA4-209ENST00000478440 PIK3CDO00329 1044 aa10.69□□□□□ -0.7
ITGA4-209ENST00000478440 PRICKLE2Q7Z3G6 844 aa10.69□□□□□ -0.7
ITGA4-209ENST00000478440 CCDC155Q8N6L0 562 aa10.69□□□□□ -0.7
ITGA4-209ENST00000478440 GRIP2Q9C0E4 1043 aa10.69□□□□□ -0.7
ITGA4-209ENST00000478440 RAB6BQ9NRW1 208 aa10.69□□□□□ -0.7
ITGA4-209ENST00000478440 USP17L5A8MUK1 530 aa10.68□□□□□ -0.7
ITGA4-209ENST00000478440 VSIG8P0DPA2 414 aa10.68□□□□□ -0.7
ITGA4-209ENST00000478440 TRIM50Q86XT4 487 aa10.68□□□□□ -0.7
ITGA4-209ENST00000478440 GLMNQ92990 594 aa10.68□□□□□ -0.7
ITGA4-209ENST00000478440 SPATA31C2B4DYI2 1134 aa10.67□□□□□ -0.7
ITGA4-209ENST00000478440 ATP9BO43861 1147 aa10.67□□□□□ -0.7
ITGA4-209ENST00000478440 IL2RAP01589 272 aa10.67□□□□□ -0.7
ITGA4-209ENST00000478440 VEGFBP49765 207 aa10.67□□□□□ -0.7
ITGA4-209ENST00000478440 PLEKHM2Q8IWE5 1019 aa10.67□□□□□ -0.7
ITGA4-209ENST00000478440 ADAMTS19Q8TE59 1207 aa10.67□□□□□ -0.7
ITGA4-209ENST00000478440 WASLO00401 505 aaPredicted RBP10.66□□□□□ -0.7
ITGA4-209ENST00000478440 CENPCQ03188 943 aa10.66□□□□□ -0.7
ITGA4-209ENST00000478440 TAS1R3Q7RTX0 852 aa10.66□□□□□ -0.7
ITGA4-209ENST00000478440 CALR3Q96L12 384 aaKnown RBP10.66□□□□□ -0.7
ITGA4-209ENST00000478440 ZSCAN10Q96SZ4 725 aaPredicted RBP10.66□□□□□ -0.7
ITGA4-209ENST00000478440 BICRAQ9NZM4 1560 aa10.65□□□□□ -0.7
ITGA4-209ENST00000478440 GDF10P55107 478 aa10.65□□□□□ -0.7
ITGA4-209ENST00000478440 NCOA4Q13772 614 aa10.65□□□□□ -0.7
ITGA4-209ENST00000478440 GNASQ5JWF2 1037 aa10.65□□□□□ -0.7
ITGA4-209ENST00000478440 GMCL1Q96IK5 515 aa10.65□□□□□ -0.7
ITGA4-209ENST00000478440 GTF3C3Q9Y5Q9 886 aa10.65□□□□□ -0.7
ITGA4-209ENST00000478440 INHAP05111 366 aa10.64□□□□□ -0.71
ITGA4-209ENST00000478440 ITGA6P23229 1130 aa10.64□□□□□ -0.71
ITGA4-209ENST00000478440 ATP1A2P50993 1020 aa10.64□□□□□ -0.71
ITGA4-209ENST00000478440 TMEM214Q6NUQ4 689 aaKnown RBP10.64□□□□□ -0.71
ITGA4-209ENST00000478440 NANOS1Q8WY41 292 aaKnown RBP10.64□□□□□ -0.71
ITGA4-209ENST00000478440 ETNK1Q9HBU6 452 aa10.64□□□□□ -0.71
ITGA4-209ENST00000478440 DYRK1BQ9Y463 629 aa10.64□□□□□ -0.71
ITGA4-209ENST00000478440 HRH3Q9Y5N1 445 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms