RNA–Protein interactions for RNA: ENST00000478405.1

SPIN3-203, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 1,620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-203ENST00000478405 KDRP35968 1356 aa23.48■■□□□ 1.35
SPIN3-203ENST00000478405 FAM196AQ6ZSG2 479 aa23.48■■□□□ 1.35
SPIN3-203ENST00000478405 SPG7Q9UQ90 795 aa23.48■■□□□ 1.35
SPIN3-203ENST00000478405 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.47■■□□□ 1.351e-6■□□□□ 10.8
SPIN3-203ENST00000478405 TNS2Q63HR2 1409 aa23.46■■□□□ 1.35
SPIN3-203ENST00000478405 PLEKHO1Q53GL0 409 aaPredicted RBP23.44■■□□□ 1.34
SPIN3-203ENST00000478405 PARP4Q9UKK3 1724 aaKnown RBP23.44■■□□□ 1.34
SPIN3-203ENST00000478405 CYP27B1O15528 508 aa23.43■■□□□ 1.34
SPIN3-203ENST00000478405 FCHSD2O94868 740 aa23.43■■□□□ 1.34
SPIN3-203ENST00000478405 AMOTQ4VCS5 1084 aa23.43■■□□□ 1.34
SPIN3-203ENST00000478405 DIEXFQ68CQ4 756 aaKnown RBP23.43■■□□□ 1.34
SPIN3-203ENST00000478405 BRWD3Q6RI45 1802 aa23.42■■□□□ 1.34
SPIN3-203ENST00000478405 CCDC184Q52MB2 194 aa23.42■■□□□ 1.34
SPIN3-203ENST00000478405 RSPH6AQ9H0K4 717 aa23.42■■□□□ 1.34
SPIN3-203ENST00000478405 PCDH11XQ9BZA7 1347 aa23.42■■□□□ 1.34
SPIN3-203ENST00000478405 PCDH11YQ9BZA8 1340 aa23.42■■□□□ 1.34
SPIN3-203ENST00000478405 LRRC37A3O60309 1634 aa23.42■■□□□ 1.34
SPIN3-203ENST00000478405 UPF1Q92900 1129 aaKnown RBP eCLIP23.41■■□□□ 1.34
SPIN3-203ENST00000478405 RGPD1P0DJD0 1748 aa23.41■■□□□ 1.34
SPIN3-203ENST00000478405 SOCS7O14512 581 aa23.41■■□□□ 1.34
SPIN3-203ENST00000478405 PRKAR2BP31323 418 aa23.41■■□□□ 1.34
SPIN3-203ENST00000478405 IFNL2Q8IZJ0 200 aa23.39■■□□□ 1.33
SPIN3-203ENST00000478405 PLEKHG2Q9H7P9 1386 aa23.38■■□□□ 1.33
SPIN3-203ENST00000478405 EP400Q96L91 3159 aa23.38■■□□□ 1.33
SPIN3-203ENST00000478405 TRIM37O94972 964 aa23.38■■□□□ 1.33
SPIN3-203ENST00000478405 WNK3Q9BYP7 1800 aa23.38■■□□□ 1.33
SPIN3-203ENST00000478405 PHKG2P15735 406 aa23.37■■□□□ 1.33
SPIN3-203ENST00000478405 WDR43Q15061 677 aaKnown RBP eCLIP23.37■■□□□ 1.33
SPIN3-203ENST00000478405 ZNF530Q6P9A1 599 aaPredicted RBP23.37■■□□□ 1.33
SPIN3-203ENST00000478405 ACSBG1Q96GR2 724 aa23.37■■□□□ 1.33
SPIN3-203ENST00000478405 PHACTR3Q96KR7 559 aa23.37■■□□□ 1.33
SPIN3-203ENST00000478405 MTHFSDQ2M296 383 aaKnown RBP23.37■■□□□ 1.33
SPIN3-203ENST00000478405 MRS2Q9HD23 443 aa23.37■■□□□ 1.33
SPIN3-203ENST00000478405 CCDC125Q86Z20 511 aa23.36■■□□□ 1.33
SPIN3-203ENST00000478405 ADAMTS8Q9UP79 889 aa23.36■■□□□ 1.33
SPIN3-203ENST00000478405 BCL9O00512 1426 aa23.36■■□□□ 1.33
SPIN3-203ENST00000478405 KCNQ2O43526 872 aa23.35■■□□□ 1.33
SPIN3-203ENST00000478405 NKX1-1Q15270 411 aaPredicted RBP23.35■■□□□ 1.33
SPIN3-203ENST00000478405 C1orf141Q5JVX7 400 aa23.34■■□□□ 1.33
SPIN3-203ENST00000478405 PNNQ9H307 717 aaKnown RBP23.34■■□□□ 1.33
SPIN3-203ENST00000478405 PTF1AQ7RTS3 328 aa23.33■■□□□ 1.33
SPIN3-203ENST00000478405 PLEKHF1Q96S99 279 aa23.33■■□□□ 1.33
SPIN3-203ENST00000478405 PRIM1P49642 420 aaKnown RBP23.33■■□□□ 1.32
SPIN3-203ENST00000478405 SF3B2Q13435 895 aaKnown RBP23.33■■□□□ 1.32
SPIN3-203ENST00000478405 BCL11BQ9C0K0 894 aaPredicted RBP23.33■■□□□ 1.32
SPIN3-203ENST00000478405 NEFMP07197 916 aa23.32■■□□□ 1.32
SPIN3-203ENST00000478405 AKAP4Q5JQC9 854 aa23.32■■□□□ 1.32
SPIN3-203ENST00000478405 HSP90AB1P08238 724 aaKnown RBP23.31■■□□□ 1.32
SPIN3-203ENST00000478405 GAS2L2Q8NHY3 880 aa23.31■■□□□ 1.32
SPIN3-203ENST00000478405 SYTL4Q96C24 671 aaPredicted RBP23.31■■□□□ 1.32
SPIN3-203ENST00000478405 PNISRQ8TF01 805 aaKnown RBP23.3■■□□□ 1.32
SPIN3-203ENST00000478405 APBA3O96018 575 aa23.3■■□□□ 1.32
SPIN3-203ENST00000478405 MPRIPQ6WCQ1 1025 aa23.3■■□□□ 1.32
SPIN3-203ENST00000478405 DCAF5Q96JK2 942 aa23.3■■□□□ 1.32
SPIN3-203ENST00000478405 CCDC146Q8IYE0 955 aa23.27■■□□□ 1.32
SPIN3-203ENST00000478405 PKD1L3Q7Z443 1732 aa23.27■■□□□ 1.32
SPIN3-203ENST00000478405 MAPK8IP3Q9UPT6 1336 aa23.26■■□□□ 1.31
SPIN3-203ENST00000478405 GNAT3A8MTJ3 354 aa23.26■■□□□ 1.31
SPIN3-203ENST00000478405 DEFB132Q7Z7B7 95 aa23.26■■□□□ 1.31
SPIN3-203ENST00000478405 MIER1Q8N108 512 aa23.26■■□□□ 1.31
SPIN3-203ENST00000478405 LGR6Q9HBX8 967 aa23.26■■□□□ 1.31
SPIN3-203ENST00000478405 SHANK3Q9BYB0 1731 aa23.25■■□□□ 1.31
SPIN3-203ENST00000478405 ERVV-2B6SEH9 535 aa23.24■■□□□ 1.31
SPIN3-203ENST00000478405 BAG6P46379 1132 aa23.24■■□□□ 1.31
SPIN3-203ENST00000478405 RUNDC1Q96C34 613 aa23.24■■□□□ 1.31
SPIN3-203ENST00000478405 EN1Q05925 392 aaPredicted RBP23.23■■□□□ 1.31
SPIN3-203ENST00000478405 RNMTO43148 476 aaKnown RBP23.22■■□□□ 1.31
SPIN3-203ENST00000478405 PIGBQ92521 554 aa23.22■■□□□ 1.31
SPIN3-203ENST00000478405 CCER2I3L3R5 266 aa23.22■■□□□ 1.31
SPIN3-203ENST00000478405 CABP4P57796 275 aa23.22■■□□□ 1.31
SPIN3-203ENST00000478405 NFE2L2Q16236 605 aa23.22■■□□□ 1.31
SPIN3-203ENST00000478405 IL17REQ8NFR9 667 aa23.22■■□□□ 1.31
SPIN3-203ENST00000478405 TMOD3Q9NYL9 352 aa23.22■■□□□ 1.31
SPIN3-203ENST00000478405 PLSCR1O15162 318 aa23.21■■□□□ 1.31
SPIN3-203ENST00000478405 KDM6AO15550 1401 aaPredicted RBP23.21■■□□□ 1.31
SPIN3-203ENST00000478405 FAM9BQ8IZU0 186 aa23.21■■□□□ 1.31
SPIN3-203ENST00000478405 MAP3K5Q99683 1374 aa23.21■■□□□ 1.31
SPIN3-203ENST00000478405 NFATC2IPQ8NCF5 419 aa23.2■■□□□ 1.3
SPIN3-203ENST00000478405 RTF1Q92541 710 aaKnown RBP23.2■■□□□ 1.3
SPIN3-203ENST00000478405 CAMKK2Q96RR4 588 aa23.19■■□□□ 1.3
SPIN3-203ENST00000478405 TMPOP42166 694 aaKnown RBP23.19■■□□□ 1.3
SPIN3-203ENST00000478405 RIPK4P57078 832 aa23.19■■□□□ 1.3
SPIN3-203ENST00000478405 EZH2Q15910 746 aaKnown RBP23.19■■□□□ 1.3
SPIN3-203ENST00000478405 HTATSF1O43719 755 aaKnown RBP23.18■■□□□ 1.3
SPIN3-203ENST00000478405 DCTN1Q14203 1278 aa23.17■■□□□ 1.3
SPIN3-203ENST00000478405 NEUROD2Q15784 382 aa23.17■■□□□ 1.3
SPIN3-203ENST00000478405 MCM10Q7L590 875 aa23.17■■□□□ 1.3
SPIN3-203ENST00000478405 SLC52A2Q9HAB3 445 aa23.17■■□□□ 1.3
SPIN3-203ENST00000478405 RRP7AQ9Y3A4 280 aaKnown RBP23.17■■□□□ 1.3
SPIN3-203ENST00000478405 APAF1O14727 1248 aa23.15■■□□□ 1.3
SPIN3-203ENST00000478405 PROM2Q8N271 834 aa23.15■■□□□ 1.3
SPIN3-203ENST00000478405 ASAP1Q9ULH1 1129 aa23.15■■□□□ 1.3
SPIN3-203ENST00000478405 KAT6BQ8WYB5 2073 aa23.14■■□□□ 1.3
SPIN3-203ENST00000478405 TEFQ10587 303 aa23.14■■□□□ 1.29
SPIN3-203ENST00000478405 SBF2Q86WG5 1849 aa23.14■■□□□ 1.29
SPIN3-203ENST00000478405 ATG3Q9NT62 314 aa23.13■■□□□ 1.29
SPIN3-203ENST00000478405 TXNRD1Q16881 649 aa23.12■■□□□ 1.29
SPIN3-203ENST00000478405 SMARCC1Q92922 1105 aaPredicted RBP23.12■■□□□ 1.29
SPIN3-203ENST00000478405 CEMIPQ8WUJ3 1361 aa23.12■■□□□ 1.29
SPIN3-203ENST00000478405 NHSQ6T4R5 1651 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms