RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 DCTN1Q14203 1278 aa15.81■□□□□ 0.12
TRAF3IP3-213ENST00000478359 MTHFSDQ2M296 383 aaKnown RBP15.81■□□□□ 0.12
TRAF3IP3-213ENST00000478359 TSPYL6Q8N831 410 aa15.81■□□□□ 0.12
TRAF3IP3-213ENST00000478359 SLIT3O75094 1523 aa15.81■□□□□ 0.12
TRAF3IP3-213ENST00000478359 C8orf58Q8NAV2 365 aa15.8■□□□□ 0.12
TRAF3IP3-213ENST00000478359 ABCC4O15439 1325 aa15.8■□□□□ 0.12
TRAF3IP3-213ENST00000478359 LRRC37A3O60309 1634 aa15.8■□□□□ 0.12
TRAF3IP3-213ENST00000478359 NUTM2GQ5VZR2 741 aa15.8■□□□□ 0.12
TRAF3IP3-213ENST00000478359 DDRGK1Q96HY6 314 aa15.8■□□□□ 0.12
TRAF3IP3-213ENST00000478359 GNAT3A8MTJ3 354 aa15.79■□□□□ 0.12
TRAF3IP3-213ENST00000478359 C8orf34Q49A92 452 aa15.79■□□□□ 0.12
TRAF3IP3-213ENST00000478359 MCM10Q7L590 875 aa15.79■□□□□ 0.12
TRAF3IP3-213ENST00000478359 NOP58Q9Y2X3 529 aaKnown RBP15.79■□□□□ 0.12
TRAF3IP3-213ENST00000478359 C1orf167Q5SNV9 1468 aa15.79■□□□□ 0.12
TRAF3IP3-213ENST00000478359 ZBTB47Q9UFB7 747 aaPredicted RBP15.78■□□□□ 0.12
TRAF3IP3-213ENST00000478359 PTPRCP08575 1304 aa15.78■□□□□ 0.12
TRAF3IP3-213ENST00000478359 TRPM3Q9HCF6 1732 aaPredicted RBP15.78■□□□□ 0.12
TRAF3IP3-213ENST00000478359 ELL2O00472 640 aaPredicted RBP15.77■□□□□ 0.11
TRAF3IP3-213ENST00000478359 SKAP1Q86WV1 359 aa15.77■□□□□ 0.11
TRAF3IP3-213ENST00000478359 RBM33Q96EV2 1170 aaKnown RBP15.77■□□□□ 0.11
TRAF3IP3-213ENST00000478359 MAP3K5Q99683 1374 aa15.76■□□□□ 0.11
TRAF3IP3-213ENST00000478359 ZBTB7BO15156 539 aaPredicted RBP15.76■□□□□ 0.11
TRAF3IP3-213ENST00000478359 SMC5Q8IY18 1101 aa15.76■□□□□ 0.11
TRAF3IP3-213ENST00000478359 PDZRN3Q9UPQ7 1066 aa15.76■□□□□ 0.11
TRAF3IP3-213ENST00000478359 USP19O94966 1318 aa15.76■□□□□ 0.11
TRAF3IP3-213ENST00000478359 ATF3P18847 181 aa15.76■□□□□ 0.11
TRAF3IP3-213ENST00000478359 ORAI2Q96SN7 254 aa15.76■□□□□ 0.11
TRAF3IP3-213ENST00000478359 CHMP4AQ9BY43 222 aa15.76■□□□□ 0.11
TRAF3IP3-213ENST00000478359 TSPYL4Q9UJ04 414 aa15.76■□□□□ 0.11
TRAF3IP3-213ENST00000478359 FOXO3O43524 673 aa15.75■□□□□ 0.11
TRAF3IP3-213ENST00000478359 GCP02774 474 aa15.74■□□□□ 0.11
TRAF3IP3-213ENST00000478359 KRT28Q7Z3Y7 464 aa15.74■□□□□ 0.11
TRAF3IP3-213ENST00000478359 NPM2Q86SE8 214 aaKnown RBP15.74■□□□□ 0.11
TRAF3IP3-213ENST00000478359 ARHGEF25Q86VW2 580 aa15.74■□□□□ 0.11
TRAF3IP3-213ENST00000478359 GCC1Q96CN9 775 aa15.74■□□□□ 0.11
TRAF3IP3-213ENST00000478359 INTS3Q68E01 1043 aaKnown RBP15.73■□□□□ 0.11
TRAF3IP3-213ENST00000478359 CADPS2Q86UW7 1296 aa15.73■□□□□ 0.11
TRAF3IP3-213ENST00000478359 NCAPD2Q15021 1401 aa15.72■□□□□ 0.11
TRAF3IP3-213ENST00000478359 ALS2Q96Q42 1657 aa15.72■□□□□ 0.11
TRAF3IP3-213ENST00000478359 TMEM94Q12767 1356 aa15.72■□□□□ 0.11
TRAF3IP3-213ENST00000478359 AMOTQ4VCS5 1084 aa15.71■□□□□ 0.11
TRAF3IP3-213ENST00000478359 LTV1Q96GA3 475 aaPredicted RBP15.71■□□□□ 0.11
TRAF3IP3-213ENST00000478359 CAMTA1Q9Y6Y1 1673 aa15.71■□□□□ 0.11
TRAF3IP3-213ENST00000478359 TAF7Q15545 349 aaPredicted RBP15.71■□□□□ 0.11
TRAF3IP3-213ENST00000478359 CACNA1FO60840 1977 aa15.71■□□□□ 0.1
TRAF3IP3-213ENST00000478359 MSH6P52701 1360 aa15.71■□□□□ 0.1
TRAF3IP3-213ENST00000478359 STK31Q9BXU1 1019 aa15.7■□□□□ 0.1
TRAF3IP3-213ENST00000478359 PLEKHG2Q9H7P9 1386 aa15.7■□□□□ 0.1
TRAF3IP3-213ENST00000478359 CEMIPQ8WUJ3 1361 aa15.69■□□□□ 0.1
TRAF3IP3-213ENST00000478359 LMTK3Q96Q04 1460 aa15.69■□□□□ 0.1
TRAF3IP3-213ENST00000478359 LMO7Q8WWI1 1683 aa15.69■□□□□ 0.1
TRAF3IP3-213ENST00000478359 ABCC6O95255 1503 aa15.69■□□□□ 0.1
TRAF3IP3-213ENST00000478359 OVOS2A0A0G2JMS6 1433 aa15.69■□□□□ 0.1
TRAF3IP3-213ENST00000478359 NPHP3Q7Z494 1330 aa15.69■□□□□ 0.1
TRAF3IP3-213ENST00000478359 PLEKHO1Q53GL0 409 aaPredicted RBP15.69■□□□□ 0.1
TRAF3IP3-213ENST00000478359 CCDC30Q5VVM6 783 aa15.69■□□□□ 0.1
TRAF3IP3-213ENST00000478359 NBPF6Q5VWK0 638 aa15.69■□□□□ 0.1
TRAF3IP3-213ENST00000478359 NBPF4Q96M43 638 aa15.69■□□□□ 0.1
TRAF3IP3-213ENST00000478359 UPF2Q9HAU5 1272 aaKnown RBP15.69■□□□□ 0.1
TRAF3IP3-213ENST00000478359 STRCP1A6NGW2 1772 aa15.68■□□□□ 0.1
TRAF3IP3-213ENST00000478359 NUCB1Q02818 461 aa15.68■□□□□ 0.1
TRAF3IP3-213ENST00000478359 MED1Q15648 1581 aaPredicted RBP15.68■□□□□ 0.1
TRAF3IP3-213ENST00000478359 SLC4A2P04920 1241 aa15.67■□□□□ 0.1
TRAF3IP3-213ENST00000478359 HSPA2P54652 639 aa15.67■□□□□ 0.1
TRAF3IP3-213ENST00000478359 AKAP4Q5JQC9 854 aa15.67■□□□□ 0.1
TRAF3IP3-213ENST00000478359 LMOD2Q6P5Q4 547 aa15.67■□□□□ 0.1
TRAF3IP3-213ENST00000478359 RGS12O14924 1447 aa15.67■□□□□ 0.1
TRAF3IP3-213ENST00000478359 HOXB7P09629 217 aa15.67■□□□□ 0.1
TRAF3IP3-213ENST00000478359 RPAP2Q8IXW5 612 aaPredicted RBP15.67■□□□□ 0.1
TRAF3IP3-213ENST00000478359 IL17REQ8NFR9 667 aa15.67■□□□□ 0.1
TRAF3IP3-213ENST00000478359 CCT4P50991 539 aaKnown RBP15.66■□□□□ 0.1
TRAF3IP3-213ENST00000478359 AEBP2Q6ZN18 517 aaPredicted RBP15.66■□□□□ 0.1
TRAF3IP3-213ENST00000478359 FAM208AQ9UK61 1670 aaKnown RBP15.66■□□□□ 0.1
TRAF3IP3-213ENST00000478359 KRT24Q2M2I5 525 aa15.65■□□□□ 0.1
TRAF3IP3-213ENST00000478359 CHD1LQ86WJ1 897 aa15.65■□□□□ 0.1
TRAF3IP3-213ENST00000478359 ANKRD24Q8TF21 1146 aa15.65■□□□□ 0.1
TRAF3IP3-213ENST00000478359 MIS18AQ9NYP9 233 aa15.65■□□□□ 0.1
TRAF3IP3-213ENST00000478359 DAXXQ9UER7 740 aaPredicted RBP15.65■□□□□ 0.1
TRAF3IP3-213ENST00000478359 RGPD2P0DJD1 1756 aa15.64■□□□□ 0.09
TRAF3IP3-213ENST00000478359 ZBTB7CA1YPR0 619 aa15.64■□□□□ 0.09
TRAF3IP3-213ENST00000478359 XPCQ01831 940 aaPredicted RBP15.64■□□□□ 0.09
TRAF3IP3-213ENST00000478359 USHBP1Q8N6Y0 703 aa15.64■□□□□ 0.09
TRAF3IP3-213ENST00000478359 TNS3Q68CZ2 1445 aa15.64■□□□□ 0.09
TRAF3IP3-213ENST00000478359 C1orf141Q5JVX7 400 aa15.63■□□□□ 0.09
TRAF3IP3-213ENST00000478359 KDM3BQ7LBC6 1761 aa15.63■□□□□ 0.09
TRAF3IP3-213ENST00000478359 PXDNLA1KZ92 1463 aa15.63■□□□□ 0.09
TRAF3IP3-213ENST00000478359 EIF5BO60841 1220 aaKnown RBP15.63■□□□□ 0.09
TRAF3IP3-213ENST00000478359 TEFQ10587 303 aa15.62■□□□□ 0.09
TRAF3IP3-213ENST00000478359 ZNF530Q6P9A1 599 aaPredicted RBP15.62■□□□□ 0.09
TRAF3IP3-213ENST00000478359 ERBB3P21860 1342 aa15.62■□□□□ 0.09
TRAF3IP3-213ENST00000478359 N4BP2Q86UW6 1770 aaPredicted RBP15.62■□□□□ 0.09
TRAF3IP3-213ENST00000478359 ANKRD44Q8N8A2 993 aa15.61■□□□□ 0.09
TRAF3IP3-213ENST00000478359 HMMRO75330 724 aa15.61■□□□□ 0.09
TRAF3IP3-213ENST00000478359 LRRC59Q96AG4 307 aaKnown RBP15.6■□□□□ 0.09
TRAF3IP3-213ENST00000478359 DCTPP1Q9H773 170 aa15.6■□□□□ 0.09
TRAF3IP3-213ENST00000478359 PXDNQ92626 1479 aa15.59■□□□□ 0.09
TRAF3IP3-213ENST00000478359 FLIIQ13045 1269 aa15.59■□□□□ 0.09
TRAF3IP3-213ENST00000478359 BMP2KLQ5H9B9 411 aa15.59■□□□□ 0.09
TRAF3IP3-213ENST00000478359 ANKRD45Q5TZF3 282 aa15.59■□□□□ 0.09
TRAF3IP3-213ENST00000478359 ATP10DQ9P241 1426 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms