RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 MEGF6O75095 1541 aa19.97■□□□□ 0.79
SMARCE1-209ENST00000478349 FBLN1P23142 703 aa19.97■□□□□ 0.79
SMARCE1-209ENST00000478349 PCDH11XQ9BZA7 1347 aa19.97■□□□□ 0.79
SMARCE1-209ENST00000478349 PCDH11YQ9BZA8 1340 aa19.97■□□□□ 0.79
SMARCE1-209ENST00000478349 NBPF6Q5VWK0 638 aa19.96■□□□□ 0.79
SMARCE1-209ENST00000478349 NBPF4Q96M43 638 aa19.96■□□□□ 0.79
SMARCE1-209ENST00000478349 KIF20BQ96Q89 1820 aa19.96■□□□□ 0.79
SMARCE1-209ENST00000478349 BTAF1O14981 1849 aa19.95■□□□□ 0.78
SMARCE1-209ENST00000478349 EIF4G2P78344 907 aaKnown RBP eCLIP19.95■□□□□ 0.78
SMARCE1-209ENST00000478349 PRIM1P49642 420 aaKnown RBP19.94■□□□□ 0.78
SMARCE1-209ENST00000478349 HSP90AB2PQ58FF8 381 aa19.94■□□□□ 0.78
SMARCE1-209ENST00000478349 PAPPAQ13219 1627 aa19.94■□□□□ 0.78
SMARCE1-209ENST00000478349 USHBP1Q8N6Y0 703 aa19.93■□□□□ 0.78
SMARCE1-209ENST00000478349 CCER1Q8TC90 406 aaPredicted RBP19.93■□□□□ 0.78
SMARCE1-209ENST00000478349 POLR3GLQ9BT43 218 aa19.93■□□□□ 0.78
SMARCE1-209ENST00000478349 CARD14Q9BXL6 1004 aa19.93■□□□□ 0.78
SMARCE1-209ENST00000478349 ATF5Q9Y2D1 282 aaPredicted RBP19.93■□□□□ 0.78
SMARCE1-209ENST00000478349 MYOM1P52179 1685 aa19.93■□□□□ 0.78
SMARCE1-209ENST00000478349 PPM1GO15355 546 aaPredicted RBP19.92■□□□□ 0.78
SMARCE1-209ENST00000478349 SLC16A10Q8TF71 515 aa19.92■□□□□ 0.78
SMARCE1-209ENST00000478349 PDGFDQ9GZP0 370 aaPredicted RBP19.92■□□□□ 0.78
SMARCE1-209ENST00000478349 PTGER2P43116 358 aa19.91■□□□□ 0.78
SMARCE1-209ENST00000478349 LRRC4BQ9NT99 713 aa19.9■□□□□ 0.78
SMARCE1-209ENST00000478349 TFCP2L1Q9NZI6 479 aa19.9■□□□□ 0.78
SMARCE1-209ENST00000478349 EMILIN1Q9Y6C2 1016 aa19.9■□□□□ 0.78
SMARCE1-209ENST00000478349 YY1P25490 414 aa19.89■□□□□ 0.77
SMARCE1-209ENST00000478349 POLD1P28340 1107 aa19.89■□□□□ 0.77
SMARCE1-209ENST00000478349 ZNF827Q17R98 1081 aa19.89■□□□□ 0.77
SMARCE1-209ENST00000478349 DOT1LQ8TEK3 1739 aa19.89■□□□□ 0.77
SMARCE1-209ENST00000478349 CCNL1Q9UK58 526 aaPredicted RBP19.89■□□□□ 0.77
SMARCE1-209ENST00000478349 NSD2O96028 1365 aa19.88■□□□□ 0.77
SMARCE1-209ENST00000478349 WASHC2AQ641Q2 1341 aa19.88■□□□□ 0.77
SMARCE1-209ENST00000478349 AKT1S1Q96B36 256 aa19.88■□□□□ 0.77
SMARCE1-209ENST00000478349 ARXQ96QS3 562 aa19.88■□□□□ 0.77
SMARCE1-209ENST00000478349 SPG7Q9UQ90 795 aa19.88■□□□□ 0.77
SMARCE1-209ENST00000478349 FHDC1Q9C0D6 1143 aaPredicted RBP19.86■□□□□ 0.77
SMARCE1-209ENST00000478349 MAP3K5Q99683 1374 aa19.85■□□□□ 0.77
SMARCE1-209ENST00000478349 PLEKHG2Q9H7P9 1386 aa19.85■□□□□ 0.77
SMARCE1-209ENST00000478349 SMARCC1Q92922 1105 aaPredicted RBP19.85■□□□□ 0.77
SMARCE1-209ENST00000478349 SGIP1Q9BQI5 828 aa19.85■□□□□ 0.77
SMARCE1-209ENST00000478349 NCAPD2Q15021 1401 aa19.85■□□□□ 0.77
SMARCE1-209ENST00000478349 HSPA5P11021 654 aaKnown RBP19.84■□□□□ 0.77
SMARCE1-209ENST00000478349 SYT17Q9BSW7 474 aa19.84■□□□□ 0.77
SMARCE1-209ENST00000478349 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.84■□□□□ 0.774e-7■■□□□ 12.7
SMARCE1-209ENST00000478349 SHANK3Q9BYB0 1731 aa19.83■□□□□ 0.77
SMARCE1-209ENST00000478349 RGPD2P0DJD1 1756 aa19.83■□□□□ 0.76
SMARCE1-209ENST00000478349 ANKRD26Q9UPS8 1709 aa19.82■□□□□ 0.76
SMARCE1-209ENST00000478349 PNPLA7Q6ZV29 1317 aa19.82■□□□□ 0.76
SMARCE1-209ENST00000478349 KAT6BQ8WYB5 2073 aa19.82■□□□□ 0.76
SMARCE1-209ENST00000478349 PALLDQ8WX93 1383 aa19.82■□□□□ 0.76
SMARCE1-209ENST00000478349 CYP27B1O15528 508 aa19.81■□□□□ 0.76
SMARCE1-209ENST00000478349 MPRIPQ6WCQ1 1025 aa19.81■□□□□ 0.76
SMARCE1-209ENST00000478349 FLAD1Q8NFF5 587 aa19.81■□□□□ 0.76
SMARCE1-209ENST00000478349 POLKQ9UBT6 870 aa19.81■□□□□ 0.76
SMARCE1-209ENST00000478349 QSER1Q2KHR3 1735 aa19.8■□□□□ 0.76
SMARCE1-209ENST00000478349 LY75O60449 1722 aa19.79■□□□□ 0.76
SMARCE1-209ENST00000478349 TNNT2P45379 298 aaPredicted RBP19.79■□□□□ 0.76
SMARCE1-209ENST00000478349 EYA1Q99502 592 aa19.79■□□□□ 0.76
SMARCE1-209ENST00000478349 KCNQ4P56696 695 aa19.78■□□□□ 0.76
SMARCE1-209ENST00000478349 NKX1-1Q15270 411 aaPredicted RBP19.78■□□□□ 0.76
SMARCE1-209ENST00000478349 PANK3Q9H999 370 aa19.78■□□□□ 0.76
SMARCE1-209ENST00000478349 PKD1L3Q7Z443 1732 aa19.78■□□□□ 0.76
SMARCE1-209ENST00000478349 IFNL2Q8IZJ0 200 aa19.77■□□□□ 0.76
SMARCE1-209ENST00000478349 KLHL34Q8N239 644 aa19.77■□□□□ 0.76
SMARCE1-209ENST00000478349 TMOD3Q9NYL9 352 aa19.77■□□□□ 0.76
SMARCE1-209ENST00000478349 KNSTRNQ9Y448 316 aa19.77■□□□□ 0.76
SMARCE1-209ENST00000478349 EIF4A2Q14240 407 aaKnown RBP19.76■□□□□ 0.75
SMARCE1-209ENST00000478349 MORC1Q86VD1 984 aa19.75■□□□□ 0.75
SMARCE1-209ENST00000478349 AK7Q96M32 723 aa19.75■□□□□ 0.75
SMARCE1-209ENST00000478349 HSP90AB1P08238 724 aaKnown RBP19.74■□□□□ 0.75
SMARCE1-209ENST00000478349 IGSF1Q8N6C5 1336 aa19.74■□□□□ 0.75
SMARCE1-209ENST00000478349 PHKG2P15735 406 aa19.72■□□□□ 0.75
SMARCE1-209ENST00000478349 GPR162Q16538 588 aa19.72■□□□□ 0.75
SMARCE1-209ENST00000478349 PIGBQ92521 554 aa19.72■□□□□ 0.75
SMARCE1-209ENST00000478349 AMOTQ4VCS5 1084 aa19.71■□□□□ 0.75
SMARCE1-209ENST00000478349 PLEKHO1Q53GL0 409 aaPredicted RBP19.71■□□□□ 0.75
SMARCE1-209ENST00000478349 COL23A1Q86Y22 540 aaPredicted RBP19.71■□□□□ 0.75
SMARCE1-209ENST00000478349 C5P01031 1676 aa19.71■□□□□ 0.75
SMARCE1-209ENST00000478349 LOC102724428A0A0B4J2F2 783 aa19.69■□□□□ 0.74
SMARCE1-209ENST00000478349 SIK1P57059 783 aa19.69■□□□□ 0.74
SMARCE1-209ENST00000478349 DCAF5Q96JK2 942 aa19.69■□□□□ 0.74
SMARCE1-209ENST00000478349 MAP2P11137 1827 aaKnown RBP19.68■□□□□ 0.74
SMARCE1-209ENST00000478349 TOGARAM1Q9Y4F4 1720 aa19.68■□□□□ 0.74
SMARCE1-209ENST00000478349 ERVV-2B6SEH9 535 aa19.67■□□□□ 0.74
SMARCE1-209ENST00000478349 SSFA2P28290 1259 aa19.67■□□□□ 0.74
SMARCE1-209ENST00000478349 C1orf141Q5JVX7 400 aa19.67■□□□□ 0.74
SMARCE1-209ENST00000478349 PELP1Q8IZL8 1130 aaKnown RBP19.67■□□□□ 0.74
SMARCE1-209ENST00000478349 COL24A1Q17RW2 1714 aa19.66■□□□□ 0.74
SMARCE1-209ENST00000478349 TUBGCP6Q96RT7 1819 aa19.66■□□□□ 0.74
SMARCE1-209ENST00000478349 C4BP0C0L5 1744 aa19.65■□□□□ 0.74
SMARCE1-209ENST00000478349 MSL1Q68DK7 614 aa19.65■□□□□ 0.74
SMARCE1-209ENST00000478349 ZNF530Q6P9A1 599 aaPredicted RBP19.65■□□□□ 0.74
SMARCE1-209ENST00000478349 GRIN3BO60391 1043 aa19.64■□□□□ 0.73
SMARCE1-209ENST00000478349 PHF14O94880 888 aa19.64■□□□□ 0.73
SMARCE1-209ENST00000478349 ATP6V1AP38606 617 aa19.64■□□□□ 0.73
SMARCE1-209ENST00000478349 CD2APQ9Y5K6 639 aa19.64■□□□□ 0.73
SMARCE1-209ENST00000478349 KIF7Q2M1P5 1343 aa19.63■□□□□ 0.73
SMARCE1-209ENST00000478349 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.63■□□□□ 0.73
SMARCE1-209ENST00000478349 ASAP1Q9ULH1 1129 aa19.63■□□□□ 0.73
SMARCE1-209ENST00000478349 GNPATO15228 680 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms