RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 NHSQ6T4R5 1651 aa18.98■□□□□ 0.63
RCC1-211ENST00000478232 SYTL4Q96C24 671 aaPredicted RBP18.97■□□□□ 0.63
RCC1-211ENST00000478232 PANK3Q9H999 370 aa18.97■□□□□ 0.63
RCC1-211ENST00000478232 PPP1R1BQ9UD71 204 aaPredicted RBP18.97■□□□□ 0.63
RCC1-211ENST00000478232 MYOM1P52179 1685 aa18.97■□□□□ 0.63
RCC1-211ENST00000478232 WASHC2AQ641Q2 1341 aa18.97■□□□□ 0.63
RCC1-211ENST00000478232 KIF20BQ96Q89 1820 aa18.96■□□□□ 0.63
RCC1-211ENST00000478232 MEGF6O75095 1541 aa18.95■□□□□ 0.62
RCC1-211ENST00000478232 SLC27A3Q5K4L6 730 aa18.95■□□□□ 0.62
RCC1-211ENST00000478232 PDGFDQ9GZP0 370 aaPredicted RBP18.95■□□□□ 0.62
RCC1-211ENST00000478232 POLKQ9UBT6 870 aa18.95■□□□□ 0.62
RCC1-211ENST00000478232 LRRC4BQ9NT99 713 aa18.93■□□□□ 0.62
RCC1-211ENST00000478232 KAT6BQ8WYB5 2073 aa18.93■□□□□ 0.62
RCC1-211ENST00000478232 RGPD2P0DJD1 1756 aa18.92■□□□□ 0.62
RCC1-211ENST00000478232 ZBTB7AO95365 584 aa18.92■□□□□ 0.62
RCC1-211ENST00000478232 PCDH11XQ9BZA7 1347 aa18.91■□□□□ 0.62
RCC1-211ENST00000478232 PCDH11YQ9BZA8 1340 aa18.91■□□□□ 0.62
RCC1-211ENST00000478232 TNNT2P45379 298 aaPredicted RBP18.9■□□□□ 0.62
RCC1-211ENST00000478232 EYA1Q99502 592 aa18.9■□□□□ 0.62
RCC1-211ENST00000478232 ATF5Q9Y2D1 282 aaPredicted RBP18.9■□□□□ 0.62
RCC1-211ENST00000478232 BTAF1O14981 1849 aa18.9■□□□□ 0.62
RCC1-211ENST00000478232 MTFR1LQ9H019 292 aa18.89■□□□□ 0.61
RCC1-211ENST00000478232 SPG7Q9UQ90 795 aa18.89■□□□□ 0.61
RCC1-211ENST00000478232 CYP27B1O15528 508 aa18.88■□□□□ 0.61
RCC1-211ENST00000478232 PTGER2P43116 358 aa18.88■□□□□ 0.61
RCC1-211ENST00000478232 AKT1S1Q96B36 256 aa18.88■□□□□ 0.61
RCC1-211ENST00000478232 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.88■□□□□ 0.61
RCC1-211ENST00000478232 NSD2O96028 1365 aa18.87■□□□□ 0.61
RCC1-211ENST00000478232 HMGB2P26583 209 aaKnown RBP18.87■□□□□ 0.61
RCC1-211ENST00000478232 ZNF827Q17R98 1081 aa18.87■□□□□ 0.61
RCC1-211ENST00000478232 KNSTRNQ9Y448 316 aa18.87■□□□□ 0.61
RCC1-211ENST00000478232 CASZ1Q86V15 1759 aa18.86■□□□□ 0.61
RCC1-211ENST00000478232 NCAPD2Q15021 1401 aa18.86■□□□□ 0.61
RCC1-211ENST00000478232 DCAF8L1A6NGE4 600 aa18.86■□□□□ 0.61
RCC1-211ENST00000478232 NKX1-1Q15270 411 aaPredicted RBP18.86■□□□□ 0.61
RCC1-211ENST00000478232 MORC1Q86VD1 984 aa18.86■□□□□ 0.61
RCC1-211ENST00000478232 KCNQ4P56696 695 aa18.85■□□□□ 0.61
RCC1-211ENST00000478232 EIF4A2Q14240 407 aaKnown RBP18.85■□□□□ 0.61
RCC1-211ENST00000478232 MPRIPQ6WCQ1 1025 aa18.85■□□□□ 0.61
RCC1-211ENST00000478232 SLC16A10Q8TF71 515 aa18.85■□□□□ 0.61
RCC1-211ENST00000478232 CCNL1Q9UK58 526 aaPredicted RBP18.85■□□□□ 0.61
RCC1-211ENST00000478232 MAP2P11137 1827 aaKnown RBP18.84■□□□□ 0.61
RCC1-211ENST00000478232 TFCP2L1Q9NZI6 479 aa18.84■□□□□ 0.61
RCC1-211ENST00000478232 SHANK3Q9BYB0 1731 aa18.83■□□□□ 0.61
RCC1-211ENST00000478232 SGIP1Q9BQI5 828 aa18.83■□□□□ 0.6
RCC1-211ENST00000478232 PAPPAQ13219 1627 aa18.82■□□□□ 0.6
RCC1-211ENST00000478232 SMARCC1Q92922 1105 aaPredicted RBP18.82■□□□□ 0.6
RCC1-211ENST00000478232 ANKRD26Q9UPS8 1709 aa18.82■□□□□ 0.6
RCC1-211ENST00000478232 DOT1LQ8TEK3 1739 aa18.81■□□□□ 0.6
RCC1-211ENST00000478232 IFNL2Q8IZJ0 200 aa18.81■□□□□ 0.6
RCC1-211ENST00000478232 KIF7Q2M1P5 1343 aa18.8■□□□□ 0.6
RCC1-211ENST00000478232 ARXQ96QS3 562 aa18.8■□□□□ 0.6
RCC1-211ENST00000478232 PNPLA7Q6ZV29 1317 aa18.79■□□□□ 0.6
RCC1-211ENST00000478232 PHKG2P15735 406 aa18.79■□□□□ 0.6
RCC1-211ENST00000478232 PIGBQ92521 554 aa18.79■□□□□ 0.6
RCC1-211ENST00000478232 SYT17Q9BSW7 474 aa18.79■□□□□ 0.6
RCC1-211ENST00000478232 PLEKHG2Q9H7P9 1386 aa18.79■□□□□ 0.6
RCC1-211ENST00000478232 IGSF1Q8N6C5 1336 aa18.78■□□□□ 0.6
RCC1-211ENST00000478232 AMER1Q5JTC6 1135 aaPredicted RBP18.78■□□□□ 0.6
RCC1-211ENST00000478232 FHDC1Q9C0D6 1143 aaPredicted RBP18.78■□□□□ 0.6
RCC1-211ENST00000478232 PLEKHO1Q53GL0 409 aaPredicted RBP18.77■□□□□ 0.6
RCC1-211ENST00000478232 PALLDQ8WX93 1383 aa18.77■□□□□ 0.6
RCC1-211ENST00000478232 PER1O15534 1290 aaPredicted RBP18.76■□□□□ 0.59
RCC1-211ENST00000478232 POLD1P28340 1107 aa18.76■□□□□ 0.59
RCC1-211ENST00000478232 TMOD3Q9NYL9 352 aa18.76■□□□□ 0.59
RCC1-211ENST00000478232 LY75O60449 1722 aa18.76■□□□□ 0.59
RCC1-211ENST00000478232 PKD1L3Q7Z443 1732 aa18.75■□□□□ 0.59
RCC1-211ENST00000478232 AMOTQ4VCS5 1084 aa18.75■□□□□ 0.59
RCC1-211ENST00000478232 FLAD1Q8NFF5 587 aa18.75■□□□□ 0.59
RCC1-211ENST00000478232 HSP90AB1P08238 724 aaKnown RBP18.74■□□□□ 0.59
RCC1-211ENST00000478232 COL23A1Q86Y22 540 aaPredicted RBP18.74■□□□□ 0.59
RCC1-211ENST00000478232 ERVV-2B6SEH9 535 aa18.73■□□□□ 0.59
RCC1-211ENST00000478232 MSH5O43196 834 aa18.73■□□□□ 0.59
RCC1-211ENST00000478232 IL13P35225 146 aa18.72■□□□□ 0.59
RCC1-211ENST00000478232 DCAF5Q96JK2 942 aa18.72■□□□□ 0.59
RCC1-211ENST00000478232 LOC102724428A0A0B4J2F2 783 aa18.71■□□□□ 0.59
RCC1-211ENST00000478232 MTHFSP49914 203 aa18.71■□□□□ 0.59
RCC1-211ENST00000478232 SIK1P57059 783 aa18.71■□□□□ 0.59
RCC1-211ENST00000478232 SULT6B1Q6IMI4 303 aa18.71■□□□□ 0.59
RCC1-211ENST00000478232 ASAP1Q9ULH1 1129 aa18.71■□□□□ 0.59
RCC1-211ENST00000478232 MAP3K5Q99683 1374 aa18.7■□□□□ 0.58
RCC1-211ENST00000478232 YY1P25490 414 aa18.7■□□□□ 0.58
RCC1-211ENST00000478232 QSER1Q2KHR3 1735 aa18.7■□□□□ 0.58
RCC1-211ENST00000478232 ZNF530Q6P9A1 599 aaPredicted RBP18.69■□□□□ 0.58
RCC1-211ENST00000478232 AEBP1Q8IUX7 1158 aa18.69■□□□□ 0.58
RCC1-211ENST00000478232 AK7Q96M32 723 aa18.69■□□□□ 0.58
RCC1-211ENST00000478232 ATG3Q9NT62 314 aa18.69■□□□□ 0.58
RCC1-211ENST00000478232 C1orf141Q5JVX7 400 aa18.68■□□□□ 0.58
RCC1-211ENST00000478232 CC2D1BQ5T0F9 858 aaKnown RBP18.68■□□□□ 0.58
RCC1-211ENST00000478232 ITGB4P16144 1822 aa18.67■□□□□ 0.58
RCC1-211ENST00000478232 TOGARAM1Q9Y4F4 1720 aa18.67■□□□□ 0.58
RCC1-211ENST00000478232 ATP6V1AP38606 617 aa18.67■□□□□ 0.58
RCC1-211ENST00000478232 CABP4P57796 275 aa18.67■□□□□ 0.58
RCC1-211ENST00000478232 KDRP35968 1356 aa18.66■□□□□ 0.58
RCC1-211ENST00000478232 KLHL34Q8N239 644 aa18.65■□□□□ 0.58
RCC1-211ENST00000478232 LINC00116Q8NCU8 138 aa18.65■□□□□ 0.58
RCC1-211ENST00000478232 NPC1L1Q9UHC9 1359 aa18.65■□□□□ 0.58
RCC1-211ENST00000478232 DIAPH1O60610 1272 aaKnown RBP18.64■□□□□ 0.57
RCC1-211ENST00000478232 ITPK1Q13572 414 aa18.64■□□□□ 0.57
RCC1-211ENST00000478232 C5P01031 1676 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms