RNA–Protein interactions for RNA: ENST00000478015.5

LCLAT1-209, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-209ENST00000478015 NHSQ6T4R5 1651 aa14.15□□□□□ -0.14
LCLAT1-209ENST00000478015 BTAF1O14981 1849 aa14.14□□□□□ -0.15
LCLAT1-209ENST00000478015 PARD3Q8TEW0 1356 aa14.14□□□□□ -0.15
LCLAT1-209ENST00000478015 RGPD3A6NKT7 1758 aaPredicted RBP14.14□□□□□ -0.15
LCLAT1-209ENST00000478015 RGPD4Q7Z3J3 1758 aa14.14□□□□□ -0.15
LCLAT1-209ENST00000478015 WASHC2AQ641Q2 1341 aa14.12□□□□□ -0.15
LCLAT1-209ENST00000478015 PER1O15534 1290 aaPredicted RBP14.11□□□□□ -0.15
LCLAT1-209ENST00000478015 KCNQ4P56696 695 aa14.11□□□□□ -0.15
LCLAT1-209ENST00000478015 TXNRD1Q16881 649 aa14.11□□□□□ -0.15
LCLAT1-209ENST00000478015 AMER1Q5JTC6 1135 aaPredicted RBP14.11□□□□□ -0.15
LCLAT1-209ENST00000478015 ZCRB1Q8TBF4 217 aaKnown RBP14.11□□□□□ -0.15
LCLAT1-209ENST00000478015 EYA1Q99502 592 aa14.11□□□□□ -0.15
LCLAT1-209ENST00000478015 DOT1LQ8TEK3 1739 aa14.11□□□□□ -0.15
LCLAT1-209ENST00000478015 NSD2O96028 1365 aa14.11□□□□□ -0.15
LCLAT1-209ENST00000478015 KIF24Q5T7B8 1368 aa14.11□□□□□ -0.15
LCLAT1-209ENST00000478015 NCAPD2Q15021 1401 aa14.1□□□□□ -0.15
LCLAT1-209ENST00000478015 LRRC4BQ9NT99 713 aa14.1□□□□□ -0.15
LCLAT1-209ENST00000478015 CYP27B1O15528 508 aa14.1□□□□□ -0.15
LCLAT1-209ENST00000478015 PRIM1P49642 420 aaKnown RBP14.1□□□□□ -0.15
LCLAT1-209ENST00000478015 LRP5O75197 1615 aa14.1□□□□□ -0.15
LCLAT1-209ENST00000478015 EIF4A2Q14240 407 aaKnown RBP14.09□□□□□ -0.15
LCLAT1-209ENST00000478015 TOGARAM1Q9Y4F4 1720 aa14.07□□□□□ -0.16
LCLAT1-209ENST00000478015 SMG6Q86US8 1419 aaKnown RBP14.07□□□□□ -0.16
LCLAT1-209ENST00000478015 PAPPAQ13219 1627 aa14.06□□□□□ -0.16
LCLAT1-209ENST00000478015 RAPGEF4Q8WZA2 1011 aa14.06□□□□□ -0.16
LCLAT1-209ENST00000478015 SYTL4Q96C24 671 aaPredicted RBP14.06□□□□□ -0.16
LCLAT1-209ENST00000478015 PKD1L3Q7Z443 1732 aa14.06□□□□□ -0.16
LCLAT1-209ENST00000478015 CASZ1Q86V15 1759 aa14.06□□□□□ -0.16
LCLAT1-209ENST00000478015 ZNF827Q17R98 1081 aa14.05□□□□□ -0.16
LCLAT1-209ENST00000478015 KNSTRNQ9Y448 316 aa14.05□□□□□ -0.16
LCLAT1-209ENST00000478015 TATP17735 454 aaPredicted RBP14.04□□□□□ -0.16
LCLAT1-209ENST00000478015 NBPF14Q5TI25 921 aa14.04□□□□□ -0.16
LCLAT1-209ENST00000478015 MORC1Q86VD1 984 aa14.04□□□□□ -0.16
LCLAT1-209ENST00000478015 AEBP1Q8IUX7 1158 aa14.04□□□□□ -0.16
LCLAT1-209ENST00000478015 ITGB4P16144 1822 aa14.03□□□□□ -0.16
LCLAT1-209ENST00000478015 CNGB1Q14028 1251 aaPredicted RBP14.03□□□□□ -0.16
LCLAT1-209ENST00000478015 SLC15A2Q16348 729 aa14.03□□□□□ -0.16
LCLAT1-209ENST00000478015 LY75O60449 1722 aa14.03□□□□□ -0.16
LCLAT1-209ENST00000478015 IGSF1Q8N6C5 1336 aa14.02□□□□□ -0.16
LCLAT1-209ENST00000478015 CC2D1BQ5T0F9 858 aaKnown RBP14.02□□□□□ -0.16
LCLAT1-209ENST00000478015 PCDH11XQ9BZA7 1347 aa14.01□□□□□ -0.17
LCLAT1-209ENST00000478015 PCDH11YQ9BZA8 1340 aa14.01□□□□□ -0.17
LCLAT1-209ENST00000478015 ZBTB7AO95365 584 aa14.01□□□□□ -0.17
LCLAT1-209ENST00000478015 TUBGCP6Q96RT7 1819 aa14.01□□□□□ -0.17
LCLAT1-209ENST00000478015 IL13P35225 146 aa13.99□□□□□ -0.17
LCLAT1-209ENST00000478015 MPRIPQ6WCQ1 1025 aa13.99□□□□□ -0.17
LCLAT1-209ENST00000478015 AKT1S1Q96B36 256 aa13.99□□□□□ -0.17
LCLAT1-209ENST00000478015 PTGER2P43116 358 aa13.99□□□□□ -0.17
LCLAT1-209ENST00000478015 MTHFSP49914 203 aa13.99□□□□□ -0.17
LCLAT1-209ENST00000478015 NKX1-1Q15270 411 aaPredicted RBP13.99□□□□□ -0.17
LCLAT1-209ENST00000478015 PIGBQ92521 554 aa13.99□□□□□ -0.17
LCLAT1-209ENST00000478015 AMIGO3Q86WK7 504 aa13.98□□□□□ -0.17
LCLAT1-209ENST00000478015 ATF5Q9Y2D1 282 aaPredicted RBP13.98□□□□□ -0.17
LCLAT1-209ENST00000478015 PHKG2P15735 406 aa13.97□□□□□ -0.17
LCLAT1-209ENST00000478015 STK32BQ9NY57 414 aa13.97□□□□□ -0.17
LCLAT1-209ENST00000478015 SMIM5Q71RC9 77 aa13.97□□□□□ -0.17
LCLAT1-209ENST00000478015 SGIP1Q9BQI5 828 aa13.97□□□□□ -0.17
LCLAT1-209ENST00000478015 SPON1Q9HCB6 807 aa13.96□□□□□ -0.17
LCLAT1-209ENST00000478015 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.96□□□□□ -0.17
LCLAT1-209ENST00000478015 SULT6B1Q6IMI4 303 aa13.95□□□□□ -0.18
LCLAT1-209ENST00000478015 SPG7Q9UQ90 795 aa13.95□□□□□ -0.18
LCLAT1-209ENST00000478015 TAF1LQ8IZX4 1826 aa13.95□□□□□ -0.18
LCLAT1-209ENST00000478015 PNPLA7Q6ZV29 1317 aa13.95□□□□□ -0.18
LCLAT1-209ENST00000478015 KDRP35968 1356 aa13.95□□□□□ -0.18
LCLAT1-209ENST00000478015 SLC27A3Q5K4L6 730 aa13.95□□□□□ -0.18
LCLAT1-209ENST00000478015 CCNL1Q9UK58 526 aaPredicted RBP13.95□□□□□ -0.18
LCLAT1-209ENST00000478015 ASAP1Q9ULH1 1129 aa13.95□□□□□ -0.18
LCLAT1-209ENST00000478015 KDM6AO15550 1401 aaPredicted RBP13.95□□□□□ -0.18
LCLAT1-209ENST00000478015 PALLDQ8WX93 1383 aa13.94□□□□□ -0.18
LCLAT1-209ENST00000478015 COL3A1P02461 1466 aaPredicted RBP13.94□□□□□ -0.18
LCLAT1-209ENST00000478015 C5P01031 1676 aa13.93□□□□□ -0.18
LCLAT1-209ENST00000478015 HMOX1P09601 288 aa13.93□□□□□ -0.18
LCLAT1-209ENST00000478015 IFNL2Q8IZJ0 200 aa13.93□□□□□ -0.18
LCLAT1-209ENST00000478015 NPC1L1Q9UHC9 1359 aa13.92□□□□□ -0.18
LCLAT1-209ENST00000478015 SLC4A9Q96Q91 983 aa13.92□□□□□ -0.18
LCLAT1-209ENST00000478015 QSER1Q2KHR3 1735 aa13.91□□□□□ -0.18
LCLAT1-209ENST00000478015 ATG3Q9NT62 314 aa13.91□□□□□ -0.18
LCLAT1-209ENST00000478015 TFCP2L1Q9NZI6 479 aa13.91□□□□□ -0.18
LCLAT1-209ENST00000478015 ITPK1Q13572 414 aa13.9□□□□□ -0.18
LCLAT1-209ENST00000478015 ZNF530Q6P9A1 599 aaPredicted RBP13.9□□□□□ -0.18
LCLAT1-209ENST00000478015 COL23A1Q86Y22 540 aaPredicted RBP13.9□□□□□ -0.18
LCLAT1-209ENST00000478015 MTFR1LQ9H019 292 aa13.9□□□□□ -0.18
LCLAT1-209ENST00000478015 COL24A1Q17RW2 1714 aa13.89□□□□□ -0.19
LCLAT1-209ENST00000478015 LINC00116Q8NCU8 138 aa13.89□□□□□ -0.19
LCLAT1-209ENST00000478015 LGR6Q9HBX8 967 aa13.89□□□□□ -0.19
LCLAT1-209ENST00000478015 TMOD3Q9NYL9 352 aa13.89□□□□□ -0.19
LCLAT1-209ENST00000478015 C4BP0C0L5 1744 aa13.88□□□□□ -0.19
LCLAT1-209ENST00000478015 LOC102724428A0A0B4J2F2 783 aa13.88□□□□□ -0.19
LCLAT1-209ENST00000478015 SIK1P57059 783 aa13.88□□□□□ -0.19
LCLAT1-209ENST00000478015 PLEKHO1Q53GL0 409 aaPredicted RBP13.88□□□□□ -0.19
LCLAT1-209ENST00000478015 VIRMAQ69YN4 1812 aaKnown RBP13.88□□□□□ -0.19
LCLAT1-209ENST00000478015 UBR3Q6ZT12 1888 aa13.88□□□□□ -0.19
LCLAT1-209ENST00000478015 DIAPH1O60610 1272 aaKnown RBP13.87□□□□□ -0.19
LCLAT1-209ENST00000478015 DCAF5Q96JK2 942 aa13.87□□□□□ -0.19
LCLAT1-209ENST00000478015 FHDC1Q9C0D6 1143 aaPredicted RBP13.87□□□□□ -0.19
LCLAT1-209ENST00000478015 PPP1R1BQ9UD71 204 aaPredicted RBP13.87□□□□□ -0.19
LCLAT1-209ENST00000478015 SCN11AQ9UI33 1791 aa13.87□□□□□ -0.19
LCLAT1-209ENST00000478015 MTHFSDQ2M296 383 aaKnown RBP13.87□□□□□ -0.19
LCLAT1-209ENST00000478015 NFATC2IPQ8NCF5 419 aa13.87□□□□□ -0.19
LCLAT1-209ENST00000478015 MYH14Q7Z406 1995 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms