RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 ZCRB1Q8TBF4 217 aaKnown RBP16.45■□□□□ 0.22
CPSF7-211ENST00000477890 ARXQ96QS3 562 aa16.45■□□□□ 0.22
CPSF7-211ENST00000477890 AKT1S1Q96B36 256 aa16.44■□□□□ 0.22
CPSF7-211ENST00000477890 KIF20BQ96Q89 1820 aa16.44■□□□□ 0.22
CPSF7-211ENST00000477890 QSER1Q2KHR3 1735 aa16.44■□□□□ 0.22
CPSF7-211ENST00000477890 LY75O60449 1722 aa16.43■□□□□ 0.22
CPSF7-211ENST00000477890 KCNQ4P56696 695 aa16.43■□□□□ 0.22
CPSF7-211ENST00000477890 NBPF6Q5VWK0 638 aa16.43■□□□□ 0.22
CPSF7-211ENST00000477890 USHBP1Q8N6Y0 703 aa16.43■□□□□ 0.22
CPSF7-211ENST00000477890 NBPF4Q96M43 638 aa16.43■□□□□ 0.22
CPSF7-211ENST00000477890 TUBGCP6Q96RT7 1819 aa16.42■□□□□ 0.22
CPSF7-211ENST00000477890 TRIM26Q12899 539 aaPredicted RBP16.42■□□□□ 0.22
CPSF7-211ENST00000477890 SMG6Q86US8 1419 aaKnown RBP16.42■□□□□ 0.22
CPSF7-211ENST00000477890 NSD2O96028 1365 aa16.41■□□□□ 0.22
CPSF7-211ENST00000477890 CDCA8Q53HL2 280 aa16.41■□□□□ 0.22
CPSF7-211ENST00000477890 TFCP2L1Q9NZI6 479 aa16.41■□□□□ 0.22
CPSF7-211ENST00000477890 PNPLA7Q6ZV29 1317 aa16.41■□□□□ 0.22
CPSF7-211ENST00000477890 SLC16A10Q8TF71 515 aa16.4■□□□□ 0.22
CPSF7-211ENST00000477890 RAPGEF4Q8WZA2 1011 aa16.4■□□□□ 0.22
CPSF7-211ENST00000477890 CGNL1Q0VF96 1302 aa16.4■□□□□ 0.22
CPSF7-211ENST00000477890 CHD4Q14839 1912 aa16.39■□□□□ 0.21
CPSF7-211ENST00000477890 HSP90AB2PQ58FF8 381 aa16.39■□□□□ 0.21
CPSF7-211ENST00000477890 KLHL34Q8N239 644 aa16.39■□□□□ 0.21
CPSF7-211ENST00000477890 MAP3K5Q99683 1374 aa16.38■□□□□ 0.21
CPSF7-211ENST00000477890 TATP17735 454 aaPredicted RBP16.38■□□□□ 0.21
CPSF7-211ENST00000477890 POLD1P28340 1107 aa16.38■□□□□ 0.21
CPSF7-211ENST00000477890 CCNL1Q9UK58 526 aaPredicted RBP16.38■□□□□ 0.21
CPSF7-211ENST00000477890 INSRP06213 1382 aa16.38■□□□□ 0.21
CPSF7-211ENST00000477890 FLT4P35916 1363 aa16.38■□□□□ 0.21
CPSF7-211ENST00000477890 COL24A1Q17RW2 1714 aa16.37■□□□□ 0.21
CPSF7-211ENST00000477890 ZNF784Q8NCA9 323 aaPredicted RBP16.36■□□□□ 0.21
CPSF7-211ENST00000477890 PCDH11XQ9BZA7 1347 aa16.36■□□□□ 0.21
CPSF7-211ENST00000477890 PCDH11YQ9BZA8 1340 aa16.36■□□□□ 0.21
CPSF7-211ENST00000477890 NSD3Q9BZ95 1437 aa16.36■□□□□ 0.21
CPSF7-211ENST00000477890 CARD14Q9BXL6 1004 aa16.35■□□□□ 0.21
CPSF7-211ENST00000477890 KIF24Q5T7B8 1368 aa16.35■□□□□ 0.21
CPSF7-211ENST00000477890 MSH5O43196 834 aa16.34■□□□□ 0.21
CPSF7-211ENST00000477890 GPR162Q16538 588 aa16.34■□□□□ 0.21
CPSF7-211ENST00000477890 EMILIN1Q9Y6C2 1016 aa16.34■□□□□ 0.21
CPSF7-211ENST00000477890 C5P01031 1676 aa16.33■□□□□ 0.2
CPSF7-211ENST00000477890 PPM1GO15355 546 aaPredicted RBP16.32■□□□□ 0.2
CPSF7-211ENST00000477890 ITGB4P16144 1822 aa16.31■□□□□ 0.2
CPSF7-211ENST00000477890 CYP27B1O15528 508 aa16.31■□□□□ 0.2
CPSF7-211ENST00000477890 MPRIPQ6WCQ1 1025 aa16.31■□□□□ 0.2
CPSF7-211ENST00000477890 COL23A1Q86Y22 540 aaPredicted RBP16.31■□□□□ 0.2
CPSF7-211ENST00000477890 PELP1Q8IZL8 1130 aaKnown RBP16.31■□□□□ 0.2
CPSF7-211ENST00000477890 UTRNP46939 3433 aa16.31■□□□□ 0.2
CPSF7-211ENST00000477890 MAP2P11137 1827 aaKnown RBP16.31■□□□□ 0.2
CPSF7-211ENST00000477890 TAF1LQ8IZX4 1826 aa16.31■□□□□ 0.2
CPSF7-211ENST00000477890 PKD1L3Q7Z443 1732 aa16.31■□□□□ 0.2
CPSF7-211ENST00000477890 TOGARAM1Q9Y4F4 1720 aa16.31■□□□□ 0.2
CPSF7-211ENST00000477890 PALLDQ8WX93 1383 aa16.3■□□□□ 0.2
CPSF7-211ENST00000477890 ANKRD26Q9UPS8 1709 aa16.3■□□□□ 0.2
CPSF7-211ENST00000477890 MSL1Q68DK7 614 aa16.29■□□□□ 0.2
CPSF7-211ENST00000477890 NLGN2Q8NFZ4 835 aa16.29■□□□□ 0.2
CPSF7-211ENST00000477890 TIMELESSQ9UNS1 1208 aa16.29■□□□□ 0.2
CPSF7-211ENST00000477890 HMGB2P26583 209 aaKnown RBP16.27■□□□□ 0.2
CPSF7-211ENST00000477890 POLR3GLQ9BT43 218 aa16.27■□□□□ 0.2
CPSF7-211ENST00000477890 NCAPD2Q15021 1401 aa16.27■□□□□ 0.19
CPSF7-211ENST00000477890 WASHC2AQ641Q2 1341 aa16.26■□□□□ 0.19
CPSF7-211ENST00000477890 C4BP0C0L5 1744 aa16.26■□□□□ 0.19
CPSF7-211ENST00000477890 SMARCC1Q92922 1105 aaPredicted RBP16.26■□□□□ 0.19
CPSF7-211ENST00000477890 SPG7Q9UQ90 795 aa16.26■□□□□ 0.19
CPSF7-211ENST00000477890 FLAD1Q8NFF5 587 aa16.25■□□□□ 0.19
CPSF7-211ENST00000477890 PIGBQ92521 554 aa16.25■□□□□ 0.19
CPSF7-211ENST00000477890 EYA1Q99502 592 aa16.25■□□□□ 0.19
CPSF7-211ENST00000477890 PCGF6Q9BYE7 350 aa16.25■□□□□ 0.19
CPSF7-211ENST00000477890 NKX1-1Q15270 411 aaPredicted RBP16.24■□□□□ 0.19
CPSF7-211ENST00000477890 AK7Q96M32 723 aa16.24■□□□□ 0.19
CPSF7-211ENST00000477890 POLKQ9UBT6 870 aa16.24■□□□□ 0.19
CPSF7-211ENST00000477890 UBR3Q6ZT12 1888 aa16.22■□□□□ 0.19
CPSF7-211ENST00000477890 CLSPNQ9HAW4 1339 aa16.22■□□□□ 0.19
CPSF7-211ENST00000477890 YBX3P16989 372 aaKnown RBP eCLIP16.22■□□□□ 0.197e-7■□□□□ 11.1
CPSF7-211ENST00000477890 TNNT2P45379 298 aaPredicted RBP16.22■□□□□ 0.19
CPSF7-211ENST00000477890 GRIN3BO60391 1043 aa16.21■□□□□ 0.19
CPSF7-211ENST00000477890 PHF14O94880 888 aa16.21■□□□□ 0.19
CPSF7-211ENST00000477890 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.21■□□□□ 0.193e-9■■□□□ 13.7
CPSF7-211ENST00000477890 TMOD3Q9NYL9 352 aa16.21■□□□□ 0.19
CPSF7-211ENST00000477890 LOC102724428A0A0B4J2F2 783 aa16.2■□□□□ 0.18
CPSF7-211ENST00000477890 SIK1P57059 783 aa16.2■□□□□ 0.18
CPSF7-211ENST00000477890 C1QTNF8P60827 252 aa16.2■□□□□ 0.18
CPSF7-211ENST00000477890 EIF4A2Q14240 407 aaKnown RBP16.2■□□□□ 0.18
CPSF7-211ENST00000477890 SMIM5Q71RC9 77 aa16.2■□□□□ 0.18
CPSF7-211ENST00000477890 AMIGO3Q86WK7 504 aa16.2■□□□□ 0.18
CPSF7-211ENST00000477890 IFNL2Q8IZJ0 200 aa16.2■□□□□ 0.18
CPSF7-211ENST00000477890 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.19■□□□□ 0.18
CPSF7-211ENST00000477890 PHKG2P15735 406 aa16.19■□□□□ 0.18
CPSF7-211ENST00000477890 CD2APQ9Y5K6 639 aa16.19■□□□□ 0.18
CPSF7-211ENST00000477890 LINC00116Q8NCU8 138 aa16.18■□□□□ 0.18
CPSF7-211ENST00000477890 ASAP1Q9ULH1 1129 aa16.18■□□□□ 0.18
CPSF7-211ENST00000477890 SENP3-EIF4A1A0A087X0R7 540 aa16.17■□□□□ 0.18
CPSF7-211ENST00000477890 GIGYF1O75420 1035 aaPredicted RBP16.17■□□□□ 0.18
CPSF7-211ENST00000477890 ATP6V1AP38606 617 aa16.17■□□□□ 0.18
CPSF7-211ENST00000477890 EIF4G2P78344 907 aaKnown RBP eCLIP16.17■□□□□ 0.18
CPSF7-211ENST00000477890 GOLGB1Q14789 3259 aaKnown RBP16.17■□□□□ 0.18
CPSF7-211ENST00000477890 HSPA5P11021 654 aaKnown RBP16.16■□□□□ 0.18
CPSF7-211ENST00000477890 SSFA2P28290 1259 aa16.16■□□□□ 0.18
CPSF7-211ENST00000477890 ITPK1Q13572 414 aa16.16■□□□□ 0.18
CPSF7-211ENST00000477890 PANK3Q9H999 370 aa16.16■□□□□ 0.18
CPSF7-211ENST00000477890 GNPATO15228 680 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms