RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 ESF1Q9H501 851 aaKnown RBP10.15□□□□□ -0.78
VPS50-213ENST00000477572 COG6Q9Y2V7 657 aa10.15□□□□□ -0.78
VPS50-213ENST00000477572 A0A1W2PRU2 124 aa10.13□□□□□ -0.79
VPS50-213ENST00000477572 WIPF1O43516 503 aa10.13□□□□□ -0.79
VPS50-213ENST00000477572 PRICKLE2Q7Z3G6 844 aa10.13□□□□□ -0.79
VPS50-213ENST00000477572 OSBPL3Q9H4L5 887 aa10.13□□□□□ -0.79
VPS50-213ENST00000477572 RHOQP17081 205 aa10.12□□□□□ -0.79
VPS50-213ENST00000477572 CCDC155Q8N6L0 562 aa10.12□□□□□ -0.79
VPS50-213ENST00000477572 RAB6BQ9NRW1 208 aa10.12□□□□□ -0.79
VPS50-213ENST00000477572 SLFNL1Q499Z3 407 aa10.11□□□□□ -0.79
VPS50-213ENST00000477572 CCDC125Q86Z20 511 aa10.11□□□□□ -0.79
VPS50-213ENST00000477572 RNF135Q8IUD6 432 aa10.11□□□□□ -0.79
VPS50-213ENST00000477572 ARHGEF10LQ9HCE6 1279 aa10.11□□□□□ -0.79
VPS50-213ENST00000477572 CYP2U1Q7Z449 544 aa10.1□□□□□ -0.79
VPS50-213ENST00000477572 TRIM52Q96A61 297 aa10.1□□□□□ -0.79
VPS50-213ENST00000477572 WASHC4Q2M389 1173 aa10.09□□□□□ -0.79
VPS50-213ENST00000477572 OXLD1Q5BKU9 147 aa10.09□□□□□ -0.79
VPS50-213ENST00000477572 LYSMD3Q7Z3D4 306 aa10.09□□□□□ -0.79
VPS50-213ENST00000477572 PHTF2Q8N3S3 785 aa10.09□□□□□ -0.79
VPS50-213ENST00000477572 DOLKQ9UPQ8 538 aa10.09□□□□□ -0.79
VPS50-213ENST00000477572 SLC35F4A4IF30 521 aa10.08□□□□□ -0.8
VPS50-213ENST00000477572 TRAK2O60296 914 aa10.08□□□□□ -0.8
VPS50-213ENST00000477572 STAU1O95793 577 aaKnown RBP10.08□□□□□ -0.8
VPS50-213ENST00000477572 MYCP01106 439 aaPredicted RBP10.08□□□□□ -0.8
VPS50-213ENST00000477572 RNF144AP50876 292 aaPredicted RBP10.08□□□□□ -0.8
VPS50-213ENST00000477572 SEMA3FQ13275 785 aa10.08□□□□□ -0.8
VPS50-213ENST00000477572 NLRP3Q96P20 1036 aa10.08□□□□□ -0.8
VPS50-213ENST00000477572 SENP3-EIF4A1A0A087X0R7 540 aa10.07□□□□□ -0.8
VPS50-213ENST00000477572 INSM1Q01101 510 aaPredicted RBP10.07□□□□□ -0.8
VPS50-213ENST00000477572 TMEM132AQ24JP5 1023 aa10.07□□□□□ -0.8
VPS50-213ENST00000477572 GPR161Q8N6U8 529 aaKnown RBP10.07□□□□□ -0.8
VPS50-213ENST00000477572 CDC14CA4D256 554 aa10.06□□□□□ -0.8
VPS50-213ENST00000477572 VSIG8P0DPA2 414 aa10.06□□□□□ -0.8
VPS50-213ENST00000477572 UBTFP17480 764 aaKnown RBP10.06□□□□□ -0.8
VPS50-213ENST00000477572 SLC27A3Q5K4L6 730 aa10.06□□□□□ -0.8
VPS50-213ENST00000477572 VWA5B2Q8N398 1253 aa10.06□□□□□ -0.8
VPS50-213ENST00000477572 PIK3CDO00329 1044 aa10.05□□□□□ -0.8
VPS50-213ENST00000477572 RAD21O60216 631 aa10.05□□□□□ -0.8
VPS50-213ENST00000477572 POU4F2Q12837 409 aa10.05□□□□□ -0.8
VPS50-213ENST00000477572 CLN3Q13286 438 aa10.05□□□□□ -0.8
VPS50-213ENST00000477572 ITGA6P23229 1130 aa10.04□□□□□ -0.8
VPS50-213ENST00000477572 FLIIQ13045 1269 aa10.04□□□□□ -0.8
VPS50-213ENST00000477572 IL2RAP01589 272 aa10.03□□□□□ -0.8
VPS50-213ENST00000477572 CNKSR1Q969H4 720 aa10.03□□□□□ -0.8
VPS50-213ENST00000477572 CUEDC1Q9NWM3 386 aaPredicted RBP10.03□□□□□ -0.8
VPS50-213ENST00000477572 POM121CA8CG34 1229 aa10.02□□□□□ -0.81
VPS50-213ENST00000477572 GNRH1P01148 92 aa10.02□□□□□ -0.81
VPS50-213ENST00000477572 USP4Q13107 963 aa10.02□□□□□ -0.81
VPS50-213ENST00000477572 PLPP7Q8NBV4 271 aa10.02□□□□□ -0.81
VPS50-213ENST00000477572 GPC1P35052 558 aa10.01□□□□□ -0.81
VPS50-213ENST00000477572 WWC1Q8IX03 1113 aa10.01□□□□□ -0.81
VPS50-213ENST00000477572 GRIP2Q9C0E4 1043 aa10.01□□□□□ -0.81
VPS50-213ENST00000477572 LORP23490 312 aaPredicted RBP10□□□□□ -0.81
VPS50-213ENST00000477572 SOX11P35716 441 aa10□□□□□ -0.81
VPS50-213ENST00000477572 KRT76Q01546 638 aa10□□□□□ -0.81
VPS50-213ENST00000477572 CENPCQ03188 943 aa10□□□□□ -0.81
VPS50-213ENST00000477572 ZSCAN1Q8NBB4 408 aa10□□□□□ -0.81
VPS50-213ENST00000477572 CLUAP1Q96AJ1 413 aa10□□□□□ -0.81
VPS50-213ENST00000477572 CNTNAP3BQ96NU0 1288 aa10□□□□□ -0.81
VPS50-213ENST00000477572 ESYT1Q9BSJ8 1104 aa10□□□□□ -0.81
VPS50-213ENST00000477572 CNTNAP3Q9BZ76 1288 aa10□□□□□ -0.81
VPS50-213ENST00000477572 CHIC2Q9UKJ5 165 aa10□□□□□ -0.81
VPS50-213ENST00000477572 PHKA2P46019 1235 aa9.99□□□□□ -0.81
VPS50-213ENST00000477572 RIPOR1Q6ZS17 1223 aa9.99□□□□□ -0.81
VPS50-213ENST00000477572 GAS2L1Q99501 681 aaPredicted RBP9.99□□□□□ -0.81
VPS50-213ENST00000477572 COL25A1Q9BXS0 654 aaPredicted RBP9.99□□□□□ -0.81
VPS50-213ENST00000477572 ALG2Q9H553 416 aa9.99□□□□□ -0.81
VPS50-213ENST00000477572 SKIP12755 728 aa9.98□□□□□ -0.81
VPS50-213ENST00000477572 RNFT1Q5M7Z0 435 aa9.98□□□□□ -0.81
VPS50-213ENST00000477572 NBPF10Q6P3W6 841 aaKnown RBP9.98□□□□□ -0.81
VPS50-213ENST00000477572 SV2AQ7L0J3 742 aa9.98□□□□□ -0.81
VPS50-213ENST00000477572 NBPF15Q8N660 670 aa9.98□□□□□ -0.81
VPS50-213ENST00000477572 NANOS1Q8WY41 292 aaKnown RBP9.98□□□□□ -0.81
VPS50-213ENST00000477572 ETNK1Q9HBU6 452 aa9.98□□□□□ -0.81
VPS50-213ENST00000477572 STK17AQ9UEE5 414 aa9.98□□□□□ -0.81
VPS50-213ENST00000477572 XAGE2Q96GT9 111 aa9.97□□□□□ -0.81
VPS50-213ENST00000477572 MAP7D1Q3KQU3 841 aa9.96□□□□□ -0.82
VPS50-213ENST00000477572 ADAMTS19Q8TE59 1207 aa9.96□□□□□ -0.82
VPS50-213ENST00000477572 ZSCAN10Q96SZ4 725 aaPredicted RBP9.96□□□□□ -0.82
VPS50-213ENST00000477572 WASLO00401 505 aaPredicted RBP9.95□□□□□ -0.82
VPS50-213ENST00000477572 ESCO1Q5FWF5 840 aa9.95□□□□□ -0.82
VPS50-213ENST00000477572 TAS1R3Q7RTX0 852 aa9.95□□□□□ -0.82
VPS50-213ENST00000477572 DEPDC4Q8N2C3 294 aa9.95□□□□□ -0.82
VPS50-213ENST00000477572 SIRT1Q96EB6 747 aa9.95□□□□□ -0.82
VPS50-213ENST00000477572 TIMMDC1Q9NPL8 285 aa9.95□□□□□ -0.82
VPS50-213ENST00000477572 HRH3Q9Y5N1 445 aa9.95□□□□□ -0.82
VPS50-213ENST00000477572 GPR25O00155 361 aa9.94□□□□□ -0.82
VPS50-213ENST00000477572 HDGFL1Q5TGJ6 251 aa9.94□□□□□ -0.82
VPS50-213ENST00000477572 TMEM214Q6NUQ4 689 aaKnown RBP9.94□□□□□ -0.82
VPS50-213ENST00000477572 GPAMQ9HCL2 828 aa9.94□□□□□ -0.82
VPS50-213ENST00000477572 DYRK1BQ9Y463 629 aa9.94□□□□□ -0.82
VPS50-213ENST00000477572 SPATA31C2B4DYI2 1134 aa9.93□□□□□ -0.82
VPS50-213ENST00000477572 SCNN1DP51172 638 aa9.93□□□□□ -0.82
VPS50-213ENST00000477572 GDF10P55107 478 aa9.93□□□□□ -0.82
VPS50-213ENST00000477572 TLR1Q15399 786 aa9.93□□□□□ -0.82
VPS50-213ENST00000477572 DBN1Q16643 649 aa9.93□□□□□ -0.82
VPS50-213ENST00000477572 FHDC1Q9C0D6 1143 aaPredicted RBP9.93□□□□□ -0.82
VPS50-213ENST00000477572 SERTAD1Q9UHV2 236 aa9.93□□□□□ -0.82
VPS50-213ENST00000477572 ZNF837Q96EG3 531 aaPredicted RBP9.92□□□□□ -0.82
VPS50-213ENST00000477572 GTF2E1P29083 439 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms