RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 SLC27A3Q5K4L6 730 aa9.45□□□□□ -0.9
RTFDC1-206ENST00000477485 A0A1W2PP64 1363 aa9.45□□□□□ -0.9
RTFDC1-206ENST00000477485 TAF1LQ8IZX4 1826 aa9.45□□□□□ -0.9
RTFDC1-206ENST00000477485 AMPHP49418 695 aa9.44□□□□□ -0.9
RTFDC1-206ENST00000477485 PRIM1P49642 420 aaKnown RBP9.44□□□□□ -0.9
RTFDC1-206ENST00000477485 PNPLA7Q6ZV29 1317 aa9.44□□□□□ -0.9
RTFDC1-206ENST00000477485 MAP3K5Q99683 1374 aa9.44□□□□□ -0.9
RTFDC1-206ENST00000477485 UTRNP46939 3433 aa9.44□□□□□ -0.9
RTFDC1-206ENST00000477485 ITGB4P16144 1822 aa9.43□□□□□ -0.9
RTFDC1-206ENST00000477485 MSL1Q68DK7 614 aa9.43□□□□□ -0.9
RTFDC1-206ENST00000477485 NLGN2Q8NFZ4 835 aa9.43□□□□□ -0.9
RTFDC1-206ENST00000477485 SLC16A10Q8TF71 515 aa9.43□□□□□ -0.9
RTFDC1-206ENST00000477485 AKT1S1Q96B36 256 aa9.43□□□□□ -0.9
RTFDC1-206ENST00000477485 COG3Q96JB2 828 aa9.43□□□□□ -0.9
RTFDC1-206ENST00000477485 CCNL1Q9UK58 526 aaPredicted RBP9.43□□□□□ -0.9
RTFDC1-206ENST00000477485 ANKRD36BQ8N2N9 1353 aa9.42□□□□□ -0.9
RTFDC1-206ENST00000477485 TONSLQ96HA7 1378 aa9.42□□□□□ -0.9
RTFDC1-206ENST00000477485 USP47Q96K76 1375 aa9.42□□□□□ -0.9
RTFDC1-206ENST00000477485 IP6K1Q92551 441 aa9.42□□□□□ -0.9
RTFDC1-206ENST00000477485 MEGF6O75095 1541 aa9.41□□□□□ -0.9
RTFDC1-206ENST00000477485 SMG6Q86US8 1419 aaKnown RBP9.41□□□□□ -0.9
RTFDC1-206ENST00000477485 FBLN1P23142 703 aa9.41□□□□□ -0.9
RTFDC1-206ENST00000477485 HOXC9P31274 260 aa9.41□□□□□ -0.9
RTFDC1-206ENST00000477485 PPP4R3CPQ6ZMV5 832 aa9.41□□□□□ -0.9
RTFDC1-206ENST00000477485 USHBP1Q8N6Y0 703 aa9.41□□□□□ -0.9
RTFDC1-206ENST00000477485 ZCRB1Q8TBF4 217 aaKnown RBP9.41□□□□□ -0.9
RTFDC1-206ENST00000477485 MAP3K19Q56UN5 1328 aa9.4□□□□□ -0.9
RTFDC1-206ENST00000477485 NSD2O96028 1365 aa9.39□□□□□ -0.91
RTFDC1-206ENST00000477485 RRS1Q15050 365 aaKnown RBP9.39□□□□□ -0.91
RTFDC1-206ENST00000477485 RAPGEF4Q8WZA2 1011 aa9.39□□□□□ -0.91
RTFDC1-206ENST00000477485 WWC3Q9ULE0 1092 aa9.39□□□□□ -0.91
RTFDC1-206ENST00000477485 C4BP0C0L5 1744 aa9.39□□□□□ -0.91
RTFDC1-206ENST00000477485 TOGARAM1Q9Y4F4 1720 aa9.39□□□□□ -0.91
RTFDC1-206ENST00000477485 GRIN3BO60391 1043 aa9.38□□□□□ -0.91
RTFDC1-206ENST00000477485 YBX3P16989 372 aaKnown RBP eCLIP9.38□□□□□ -0.91
RTFDC1-206ENST00000477485 COL23A1Q86Y22 540 aaPredicted RBP9.38□□□□□ -0.91
RTFDC1-206ENST00000477485 ZNF526Q8TF50 670 aaPredicted RBP9.38□□□□□ -0.91
RTFDC1-206ENST00000477485 UBR3Q6ZT12 1888 aa9.38□□□□□ -0.91
RTFDC1-206ENST00000477485 RTL1A6NKG5 1358 aa9.37□□□□□ -0.91
RTFDC1-206ENST00000477485 PHF14O94880 888 aa9.37□□□□□ -0.91
RTFDC1-206ENST00000477485 TATP17735 454 aaPredicted RBP9.37□□□□□ -0.91
RTFDC1-206ENST00000477485 MPRIPQ6WCQ1 1025 aa9.37□□□□□ -0.91
RTFDC1-206ENST00000477485 GGNBP2Q9H3C7 697 aa9.37□□□□□ -0.91
RTFDC1-206ENST00000477485 ATP10DQ9P241 1426 aa9.37□□□□□ -0.91
RTFDC1-206ENST00000477485 PKD1L3Q7Z443 1732 aa9.36□□□□□ -0.91
RTFDC1-206ENST00000477485 PCDH11XQ9BZA7 1347 aa9.36□□□□□ -0.91
RTFDC1-206ENST00000477485 PCDH11YQ9BZA8 1340 aa9.36□□□□□ -0.91
RTFDC1-206ENST00000477485 MAP2P11137 1827 aaKnown RBP9.36□□□□□ -0.91
RTFDC1-206ENST00000477485 ST20-MTHFSA0A0A6YYL1 179 aa9.36□□□□□ -0.91
RTFDC1-206ENST00000477485 NBPF6Q5VWK0 638 aa9.36□□□□□ -0.91
RTFDC1-206ENST00000477485 AK7Q96M32 723 aa9.36□□□□□ -0.91
RTFDC1-206ENST00000477485 NBPF4Q96M43 638 aa9.36□□□□□ -0.91
RTFDC1-206ENST00000477485 PALLDQ8WX93 1383 aa9.36□□□□□ -0.91
RTFDC1-206ENST00000477485 GPBP1L1Q9HC44 474 aaPredicted RBP9.35□□□□□ -0.91
RTFDC1-206ENST00000477485 N4BP2Q86UW6 1770 aaPredicted RBP9.35□□□□□ -0.91
RTFDC1-206ENST00000477485 CGNL1Q0VF96 1302 aa9.34□□□□□ -0.91
RTFDC1-206ENST00000477485 GOLGB1Q14789 3259 aaKnown RBP9.34□□□□□ -0.91
RTFDC1-206ENST00000477485 PPM1GO15355 546 aaPredicted RBP9.34□□□□□ -0.91
RTFDC1-206ENST00000477485 FLAD1Q8NFF5 587 aa9.34□□□□□ -0.91
RTFDC1-206ENST00000477485 PUS7Q96PZ0 661 aaKnown RBP9.34□□□□□ -0.91
RTFDC1-206ENST00000477485 HSP90AB2PQ58FF8 381 aa9.33□□□□□ -0.92
RTFDC1-206ENST00000477485 FLT4P35916 1363 aa9.33□□□□□ -0.92
RTFDC1-206ENST00000477485 FYB1O15117 783 aa9.32□□□□□ -0.92
RTFDC1-206ENST00000477485 TMF1P82094 1093 aa9.32□□□□□ -0.92
RTFDC1-206ENST00000477485 IFFO2Q5TF58 517 aa9.32□□□□□ -0.92
RTFDC1-206ENST00000477485 SMIM5Q71RC9 77 aa9.32□□□□□ -0.92
RTFDC1-206ENST00000477485 TESK2Q96S53 571 aa9.32□□□□□ -0.92
RTFDC1-206ENST00000477485 CD2APQ9Y5K6 639 aa9.32□□□□□ -0.92
RTFDC1-206ENST00000477485 IGSF1Q8N6C5 1336 aa9.31□□□□□ -0.92
RTFDC1-206ENST00000477485 NSD3Q9BZ95 1437 aa9.31□□□□□ -0.92
RTFDC1-206ENST00000477485 ANKRD26Q9UPS8 1709 aa9.31□□□□□ -0.92
RTFDC1-206ENST00000477485 SLC24A1O60721 1099 aa9.31□□□□□ -0.92
RTFDC1-206ENST00000477485 HMGB2P26583 209 aaKnown RBP9.31□□□□□ -0.92
RTFDC1-206ENST00000477485 SMARCC1Q92922 1105 aaPredicted RBP9.31□□□□□ -0.92
RTFDC1-206ENST00000477485 INSRP06213 1382 aa9.31□□□□□ -0.92
RTFDC1-206ENST00000477485 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.3□□□□□ -0.92
RTFDC1-206ENST00000477485 EMILIN1Q9Y6C2 1016 aa9.3□□□□□ -0.92
RTFDC1-206ENST00000477485 KIF13BQ9NQT8 1826 aa9.29□□□□□ -0.92
RTFDC1-206ENST00000477485 GNPATO15228 680 aa9.29□□□□□ -0.92
RTFDC1-206ENST00000477485 CYP27B1O15528 508 aa9.29□□□□□ -0.92
RTFDC1-206ENST00000477485 POLR3GLQ9BT43 218 aa9.29□□□□□ -0.92
RTFDC1-206ENST00000477485 TMOD3Q9NYL9 352 aa9.29□□□□□ -0.92
RTFDC1-206ENST00000477485 SPG7Q9UQ90 795 aa9.29□□□□□ -0.92
RTFDC1-206ENST00000477485 CICQ96RK0 1608 aaPredicted RBP9.28□□□□□ -0.92
RTFDC1-206ENST00000477485 HSPA6P17066 643 aa9.28□□□□□ -0.92
RTFDC1-206ENST00000477485 ATP6V1AP38606 617 aa9.28□□□□□ -0.92
RTFDC1-206ENST00000477485 AMIGO3Q86WK7 504 aa9.28□□□□□ -0.92
RTFDC1-206ENST00000477485 LINC00116Q8NCU8 138 aa9.28□□□□□ -0.92
RTFDC1-206ENST00000477485 PIGBQ92521 554 aa9.28□□□□□ -0.92
RTFDC1-206ENST00000477485 C4AP0C0L4 1744 aa9.28□□□□□ -0.92
RTFDC1-206ENST00000477485 ADCY9O60503 1353 aa9.27□□□□□ -0.93
RTFDC1-206ENST00000477485 LOC102724428A0A0B4J2F2 783 aa9.27□□□□□ -0.93
RTFDC1-206ENST00000477485 SSFA2P28290 1259 aa9.27□□□□□ -0.93
RTFDC1-206ENST00000477485 SIK1P57059 783 aa9.27□□□□□ -0.93
RTFDC1-206ENST00000477485 CDCA8Q53HL2 280 aa9.27□□□□□ -0.93
RTFDC1-206ENST00000477485 COL5A3P25940 1745 aaPredicted RBP9.27□□□□□ -0.93
RTFDC1-206ENST00000477485 KIAA1551Q9HCM1 1747 aa9.27□□□□□ -0.93
RTFDC1-206ENST00000477485 BRCA1P38398 1863 aaKnown RBP9.27□□□□□ -0.93
RTFDC1-206ENST00000477485 VIRMAQ69YN4 1812 aaKnown RBP9.26□□□□□ -0.93
RTFDC1-206ENST00000477485 KIF24Q5T7B8 1368 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms