RNA–Protein interactions for RNA: ENST00000477442.6

SRSF3-203, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 5

Gene SRSF3, Length 1,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-203ENST00000477442 ZCRB1Q8TBF4 217 aaKnown RBP18.29■□□□□ 0.52
SRSF3-203ENST00000477442 SYTL4Q96C24 671 aaPredicted RBP18.29■□□□□ 0.52
SRSF3-203ENST00000477442 HSP90AB2PQ58FF8 381 aa18.28■□□□□ 0.52
SRSF3-203ENST00000477442 NSD3Q9BZ95 1437 aa18.27■□□□□ 0.52
SRSF3-203ENST00000477442 NSD2O96028 1365 aa18.27■□□□□ 0.51
SRSF3-203ENST00000477442 CDCA8Q53HL2 280 aa18.26■□□□□ 0.51
SRSF3-203ENST00000477442 SGIP1Q9BQI5 828 aa18.26■□□□□ 0.51
SRSF3-203ENST00000477442 MTFR1LQ9H019 292 aa18.26■□□□□ 0.51
SRSF3-203ENST00000477442 YY1P25490 414 aa18.25■□□□□ 0.51
SRSF3-203ENST00000477442 EMILIN1Q9Y6C2 1016 aa18.25■□□□□ 0.51
SRSF3-203ENST00000477442 AKT1S1Q96B36 256 aa18.24■□□□□ 0.51
SRSF3-203ENST00000477442 FHDC1Q9C0D6 1143 aaPredicted RBP18.24■□□□□ 0.51
SRSF3-203ENST00000477442 INSRP06213 1382 aa18.24■□□□□ 0.51
SRSF3-203ENST00000477442 FLT4P35916 1363 aa18.23■□□□□ 0.51
SRSF3-203ENST00000477442 SMG6Q86US8 1419 aaKnown RBP18.23■□□□□ 0.51
SRSF3-203ENST00000477442 SLC27A3Q5K4L6 730 aa18.22■□□□□ 0.51
SRSF3-203ENST00000477442 RAPGEF4Q8WZA2 1011 aa18.22■□□□□ 0.51
SRSF3-203ENST00000477442 TATP17735 454 aaPredicted RBP18.21■□□□□ 0.51
SRSF3-203ENST00000477442 SYT17Q9BSW7 474 aa18.21■□□□□ 0.51
SRSF3-203ENST00000477442 POLR3GLQ9BT43 218 aa18.21■□□□□ 0.51
SRSF3-203ENST00000477442 TIMELESSQ9UNS1 1208 aa18.21■□□□□ 0.51
SRSF3-203ENST00000477442 TUBGCP6Q96RT7 1819 aa18.21■□□□□ 0.51
SRSF3-203ENST00000477442 PPM1GO15355 546 aaPredicted RBP18.2■□□□□ 0.5
SRSF3-203ENST00000477442 LY75O60449 1722 aa18.2■□□□□ 0.5
SRSF3-203ENST00000477442 PNPLA7Q6ZV29 1317 aa18.2■□□□□ 0.5
SRSF3-203ENST00000477442 ARXQ96QS3 562 aa18.19■□□□□ 0.5
SRSF3-203ENST00000477442 DCAF8L1A6NGE4 600 aa18.18■□□□□ 0.5
SRSF3-203ENST00000477442 CYP27B1O15528 508 aa18.18■□□□□ 0.5
SRSF3-203ENST00000477442 CGNL1Q0VF96 1302 aa18.18■□□□□ 0.5
SRSF3-203ENST00000477442 CLSPNQ9HAW4 1339 aa18.18■□□□□ 0.5
SRSF3-203ENST00000477442 KIF24Q5T7B8 1368 aa18.17■□□□□ 0.5
SRSF3-203ENST00000477442 TFCP2L1Q9NZI6 479 aa18.17■□□□□ 0.5
SRSF3-203ENST00000477442 CCNL1Q9UK58 526 aaPredicted RBP18.17■□□□□ 0.5
SRSF3-203ENST00000477442 QSER1Q2KHR3 1735 aa18.16■□□□□ 0.5
SRSF3-203ENST00000477442 PCDH11XQ9BZA7 1347 aa18.16■□□□□ 0.5
SRSF3-203ENST00000477442 PCDH11YQ9BZA8 1340 aa18.16■□□□□ 0.5
SRSF3-203ENST00000477442 ANKRD26Q9UPS8 1709 aa18.15■□□□□ 0.5
SRSF3-203ENST00000477442 TOGARAM1Q9Y4F4 1720 aa18.15■□□□□ 0.5
SRSF3-203ENST00000477442 HSPA5P11021 654 aaKnown RBP18.14■□□□□ 0.49
SRSF3-203ENST00000477442 TNNT2P45379 298 aaPredicted RBP18.14■□□□□ 0.49
SRSF3-203ENST00000477442 POLKQ9UBT6 870 aa18.14■□□□□ 0.49
SRSF3-203ENST00000477442 MAP2P11137 1827 aaKnown RBP18.14■□□□□ 0.49
SRSF3-203ENST00000477442 NCAPD2Q15021 1401 aa18.14■□□□□ 0.49
SRSF3-203ENST00000477442 PKD1L3Q7Z443 1732 aa18.13■□□□□ 0.49
SRSF3-203ENST00000477442 MPRIPQ6WCQ1 1025 aa18.13■□□□□ 0.49
SRSF3-203ENST00000477442 KLHL34Q8N239 644 aa18.13■□□□□ 0.49
SRSF3-203ENST00000477442 EYA1Q99502 592 aa18.13■□□□□ 0.49
SRSF3-203ENST00000477442 COL23A1Q86Y22 540 aaPredicted RBP18.12■□□□□ 0.49
SRSF3-203ENST00000477442 SLC16A10Q8TF71 515 aa18.12■□□□□ 0.49
SRSF3-203ENST00000477442 WASHC2AQ641Q2 1341 aa18.12■□□□□ 0.49
SRSF3-203ENST00000477442 UTRNP46939 3433 aa18.11■□□□□ 0.49
SRSF3-203ENST00000477442 PALLDQ8WX93 1383 aa18.11■□□□□ 0.49
SRSF3-203ENST00000477442 COL24A1Q17RW2 1714 aa18.11■□□□□ 0.49
SRSF3-203ENST00000477442 ITGB4P16144 1822 aa18.1■□□□□ 0.49
SRSF3-203ENST00000477442 MAP3K5Q99683 1374 aa18.1■□□□□ 0.49
SRSF3-203ENST00000477442 MSH5O43196 834 aa18.1■□□□□ 0.49
SRSF3-203ENST00000477442 EIF4G2P78344 907 aaKnown RBP eCLIP18.1■□□□□ 0.49
SRSF3-203ENST00000477442 C5P01031 1676 aa18.09■□□□□ 0.49
SRSF3-203ENST00000477442 MSL1Q68DK7 614 aa18.09■□□□□ 0.49
SRSF3-203ENST00000477442 CCER1Q8TC90 406 aaPredicted RBP18.09■□□□□ 0.49
SRSF3-203ENST00000477442 POLD1P28340 1107 aa18.08■□□□□ 0.48
SRSF3-203ENST00000477442 EIF4A2Q14240 407 aaKnown RBP18.08■□□□□ 0.48
SRSF3-203ENST00000477442 SMIM5Q71RC9 77 aa18.08■□□□□ 0.48
SRSF3-203ENST00000477442 NLGN2Q8NFZ4 835 aa18.08■□□□□ 0.48
SRSF3-203ENST00000477442 PIGBQ92521 554 aa18.08■□□□□ 0.48
SRSF3-203ENST00000477442 PANK3Q9H999 370 aa18.08■□□□□ 0.48
SRSF3-203ENST00000477442 AMIGO3Q86WK7 504 aa18.07■□□□□ 0.48
SRSF3-203ENST00000477442 TAF1LQ8IZX4 1826 aa18.07■□□□□ 0.48
SRSF3-203ENST00000477442 NKX1-1Q15270 411 aaPredicted RBP18.06■□□□□ 0.48
SRSF3-203ENST00000477442 SPG7Q9UQ90 795 aa18.06■□□□□ 0.48
SRSF3-203ENST00000477442 GPR162Q16538 588 aa18.04■□□□□ 0.48
SRSF3-203ENST00000477442 PELP1Q8IZL8 1130 aaKnown RBP18.04■□□□□ 0.48
SRSF3-203ENST00000477442 ZNF784Q8NCA9 323 aaPredicted RBP18.04■□□□□ 0.48
SRSF3-203ENST00000477442 C4BP0C0L5 1744 aa18.03■□□□□ 0.48
SRSF3-203ENST00000477442 PHKG2P15735 406 aa18.03■□□□□ 0.48
SRSF3-203ENST00000477442 SMARCC1Q92922 1105 aaPredicted RBP18.02■□□□□ 0.48
SRSF3-203ENST00000477442 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.02■□□□□ 0.483e-12■□□□□ 9.3
SRSF3-203ENST00000477442 ASAP1Q9ULH1 1129 aa18.02■□□□□ 0.48
SRSF3-203ENST00000477442 GOLGB1Q14789 3259 aaKnown RBP18.02■□□□□ 0.47
SRSF3-203ENST00000477442 IGSF1Q8N6C5 1336 aa18.01■□□□□ 0.47
SRSF3-203ENST00000477442 PHF14O94880 888 aa18.01■□□□□ 0.47
SRSF3-203ENST00000477442 TMOD3Q9NYL9 352 aa18.01■□□□□ 0.47
SRSF3-203ENST00000477442 CHD4Q14839 1912 aa18■□□□□ 0.47
SRSF3-203ENST00000477442 LOC102724428A0A0B4J2F2 783 aa18■□□□□ 0.47
SRSF3-203ENST00000477442 SIK1P57059 783 aa18■□□□□ 0.47
SRSF3-203ENST00000477442 ITPK1Q13572 414 aa18■□□□□ 0.47
SRSF3-203ENST00000477442 IFNL2Q8IZJ0 200 aa18■□□□□ 0.47
SRSF3-203ENST00000477442 LINC00116Q8NCU8 138 aa18■□□□□ 0.47
SRSF3-203ENST00000477442 AK7Q96M32 723 aa18■□□□□ 0.47
SRSF3-203ENST00000477442 UBR3Q6ZT12 1888 aa17.99■□□□□ 0.47
SRSF3-203ENST00000477442 YBX3P16989 372 aaKnown RBP eCLIP17.98■□□□□ 0.47
SRSF3-203ENST00000477442 MORC1Q86VD1 984 aa17.98■□□□□ 0.47
SRSF3-203ENST00000477442 AEBP1Q8IUX7 1158 aa17.98■□□□□ 0.47
SRSF3-203ENST00000477442 ATG3Q9NT62 314 aa17.98■□□□□ 0.47
SRSF3-203ENST00000477442 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.97■□□□□ 0.47
SRSF3-203ENST00000477442 FLAD1Q8NFF5 587 aa17.97■□□□□ 0.47
SRSF3-203ENST00000477442 ATP6V1AP38606 617 aa17.95■□□□□ 0.46
SRSF3-203ENST00000477442 SLC4A9Q96Q91 983 aa17.95■□□□□ 0.46
SRSF3-203ENST00000477442 GNPATO15228 680 aa17.94■□□□□ 0.46
SRSF3-203ENST00000477442 ZNF530Q6P9A1 599 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms