RNA–Protein interactions for RNA: ENST00000477438.1

PARVB-206, Transcript of parvin beta, humanhuman

TSL 5

Gene PARVB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-206ENST00000477438 FKBP8Q14318 412 aa14.18□□□□□ -0.14
PARVB-206ENST00000477438 NBPF6Q5VWK0 638 aa14.18□□□□□ -0.14
PARVB-206ENST00000477438 NBPF4Q96M43 638 aa14.18□□□□□ -0.14
PARVB-206ENST00000477438 PARD3Q8TEW0 1356 aa14.18□□□□□ -0.14
PARVB-206ENST00000477438 RGPD2P0DJD1 1756 aa14.17□□□□□ -0.14
PARVB-206ENST00000477438 SOCS7O14512 581 aa14.17□□□□□ -0.14
PARVB-206ENST00000477438 CCDC184Q52MB2 194 aa14.17□□□□□ -0.14
PARVB-206ENST00000477438 PNISRQ8TF01 805 aaKnown RBP14.17□□□□□ -0.14
PARVB-206ENST00000477438 DISP2A7MBM2 1401 aa14.16□□□□□ -0.14
PARVB-206ENST00000477438 FAM196AQ6ZSG2 479 aa14.16□□□□□ -0.14
PARVB-206ENST00000477438 NEFMP07197 916 aa14.15□□□□□ -0.14
PARVB-206ENST00000477438 DDX54Q8TDD1 881 aaKnown RBP14.15□□□□□ -0.14
PARVB-206ENST00000477438 EYA1Q99502 592 aa14.15□□□□□ -0.14
PARVB-206ENST00000477438 SPG7Q9UQ90 795 aa14.15□□□□□ -0.14
PARVB-206ENST00000477438 MEGF6O75095 1541 aa14.15□□□□□ -0.14
PARVB-206ENST00000477438 IGSF1Q8N6C5 1336 aa14.15□□□□□ -0.15
PARVB-206ENST00000477438 PCDH11XQ9BZA7 1347 aa14.15□□□□□ -0.15
PARVB-206ENST00000477438 PCDH11YQ9BZA8 1340 aa14.15□□□□□ -0.15
PARVB-206ENST00000477438 ZCRB1Q8TBF4 217 aaKnown RBP14.14□□□□□ -0.15
PARVB-206ENST00000477438 FAM182BQ5T319 152 aa14.13□□□□□ -0.15
PARVB-206ENST00000477438 SULT6B1Q6IMI4 303 aa14.13□□□□□ -0.15
PARVB-206ENST00000477438 IL13P35225 146 aa14.12□□□□□ -0.15
PARVB-206ENST00000477438 CCDC125Q86Z20 511 aa14.12□□□□□ -0.15
PARVB-206ENST00000477438 RGPD1P0DJD0 1748 aa14.12□□□□□ -0.15
PARVB-206ENST00000477438 PLEKHG2Q9H7P9 1386 aa14.11□□□□□ -0.15
PARVB-206ENST00000477438 HMOX1P09601 288 aa14.11□□□□□ -0.15
PARVB-206ENST00000477438 U2AF1L5P0DN76 240 aaPredicted RBP14.11□□□□□ -0.15
PARVB-206ENST00000477438 U2AF1Q01081 240 aaKnown RBP eCLIP14.11□□□□□ -0.15
PARVB-206ENST00000477438 WDR43Q15061 677 aaKnown RBP eCLIP14.11□□□□□ -0.15
PARVB-206ENST00000477438 PLEKHO1Q53GL0 409 aaPredicted RBP14.11□□□□□ -0.15
PARVB-206ENST00000477438 C1orf141Q5JVX7 400 aa14.11□□□□□ -0.15
PARVB-206ENST00000477438 NCAPD2Q15021 1401 aa14.1□□□□□ -0.15
PARVB-206ENST00000477438 AMOTQ4VCS5 1084 aa14.1□□□□□ -0.15
PARVB-206ENST00000477438 COL3A1P02461 1466 aaPredicted RBP14.1□□□□□ -0.15
PARVB-206ENST00000477438 BAG6P46379 1132 aa14.09□□□□□ -0.15
PARVB-206ENST00000477438 MARCH10Q8NA82 808 aaPredicted RBP14.09□□□□□ -0.15
PARVB-206ENST00000477438 SYTL4Q96C24 671 aaPredicted RBP14.09□□□□□ -0.15
PARVB-206ENST00000477438 PNNQ9H307 717 aaKnown RBP14.09□□□□□ -0.15
PARVB-206ENST00000477438 PKD1L3Q7Z443 1732 aa14.08□□□□□ -0.16
PARVB-206ENST00000477438 TRIM37O94972 964 aa14.08□□□□□ -0.16
PARVB-206ENST00000477438 HSP90AB1P08238 724 aaKnown RBP14.08□□□□□ -0.16
PARVB-206ENST00000477438 ZNF530Q6P9A1 599 aaPredicted RBP14.08□□□□□ -0.16
PARVB-206ENST00000477438 AEBP1Q8IUX7 1158 aa14.08□□□□□ -0.16
PARVB-206ENST00000477438 UPF1Q92900 1129 aaKnown RBP eCLIP14.08□□□□□ -0.16
PARVB-206ENST00000477438 EP400Q96L91 3159 aa14.08□□□□□ -0.16
PARVB-206ENST00000477438 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.07□□□□□ -0.16
PARVB-206ENST00000477438 MAPK8IP3Q9UPT6 1336 aa14.07□□□□□ -0.16
PARVB-206ENST00000477438 IFNL2Q8IZJ0 200 aa14.06□□□□□ -0.16
PARVB-206ENST00000477438 ACSBG1Q96GR2 724 aa14.06□□□□□ -0.16
PARVB-206ENST00000477438 KDRP35968 1356 aa14.06□□□□□ -0.16
PARVB-206ENST00000477438 APBA3O96018 575 aa14.05□□□□□ -0.16
PARVB-206ENST00000477438 NHSQ6T4R5 1651 aa14.04□□□□□ -0.16
PARVB-206ENST00000477438 DOT1LQ8TEK3 1739 aa14.04□□□□□ -0.16
PARVB-206ENST00000477438 PRKAR2BP31323 418 aa14.04□□□□□ -0.16
PARVB-206ENST00000477438 GAS2L2Q8NHY3 880 aa14.04□□□□□ -0.16
PARVB-206ENST00000477438 BCL11BQ9C0K0 894 aaPredicted RBP14.04□□□□□ -0.16
PARVB-206ENST00000477438 BCL9O00512 1426 aa14.04□□□□□ -0.16
PARVB-206ENST00000477438 SHANK3Q9BYB0 1731 aa14.04□□□□□ -0.16
PARVB-206ENST00000477438 PPP4R2Q9NY27 417 aa14.03□□□□□ -0.16
PARVB-206ENST00000477438 TNS1Q9HBL0 1735 aaKnown RBP14.02□□□□□ -0.16
PARVB-206ENST00000477438 FCHSD2O94868 740 aa14.02□□□□□ -0.17
PARVB-206ENST00000477438 PHKG2P15735 406 aa14.02□□□□□ -0.17
PARVB-206ENST00000477438 CYP27B1O15528 508 aa14.01□□□□□ -0.17
PARVB-206ENST00000477438 AKAP4Q5JQC9 854 aa14.01□□□□□ -0.17
PARVB-206ENST00000477438 NGEFQ8N5V2 710 aa14.01□□□□□ -0.17
PARVB-206ENST00000477438 TMOD3Q9NYL9 352 aa14.01□□□□□ -0.17
PARVB-206ENST00000477438 RNF123Q5XPI4 1314 aa14□□□□□ -0.17
PARVB-206ENST00000477438 SBF2Q86WG5 1849 aa14□□□□□ -0.17
PARVB-206ENST00000477438 PRIM1P49642 420 aaKnown RBP14□□□□□ -0.17
PARVB-206ENST00000477438 RTF1Q92541 710 aaKnown RBP14□□□□□ -0.17
PARVB-206ENST00000477438 DCAF5Q96JK2 942 aa14□□□□□ -0.17
PARVB-206ENST00000477438 RSPH6AQ9H0K4 717 aa14□□□□□ -0.17
PARVB-206ENST00000477438 KAT6BQ8WYB5 2073 aa14□□□□□ -0.17
PARVB-206ENST00000477438 MAP3K5Q99683 1374 aa13.99□□□□□ -0.17
PARVB-206ENST00000477438 CABP4P57796 275 aa13.99□□□□□ -0.17
PARVB-206ENST00000477438 MPRIPQ6WCQ1 1025 aa13.99□□□□□ -0.17
PARVB-206ENST00000477438 EN1Q05925 392 aaPredicted RBP13.98□□□□□ -0.17
PARVB-206ENST00000477438 DEFB132Q7Z7B7 95 aa13.98□□□□□ -0.17
PARVB-206ENST00000477438 BTAF1O14981 1849 aa13.97□□□□□ -0.17
PARVB-206ENST00000477438 GNAT3A8MTJ3 354 aa13.97□□□□□ -0.17
PARVB-206ENST00000477438 KCNQ2O43526 872 aa13.97□□□□□ -0.17
PARVB-206ENST00000477438 MTHFSDQ2M296 383 aaKnown RBP13.97□□□□□ -0.17
PARVB-206ENST00000477438 RGPD3A6NKT7 1758 aaPredicted RBP13.96□□□□□ -0.17
PARVB-206ENST00000477438 RGPD4Q7Z3J3 1758 aa13.96□□□□□ -0.17
PARVB-206ENST00000477438 ERVV-2B6SEH9 535 aa13.96□□□□□ -0.17
PARVB-206ENST00000477438 HMGB2P26583 209 aaKnown RBP13.96□□□□□ -0.17
PARVB-206ENST00000477438 TEFQ10587 303 aa13.96□□□□□ -0.17
PARVB-206ENST00000477438 NKX1-1Q15270 411 aaPredicted RBP13.96□□□□□ -0.17
PARVB-206ENST00000477438 SMARCC1Q92922 1105 aaPredicted RBP13.96□□□□□ -0.17
PARVB-206ENST00000477438 LMOD3Q0VAK6 560 aa13.95□□□□□ -0.18
PARVB-206ENST00000477438 NBPF14Q5TI25 921 aa13.95□□□□□ -0.18
PARVB-206ENST00000477438 TOGARAM1Q9Y4F4 1720 aa13.95□□□□□ -0.18
PARVB-206ENST00000477438 EZH2Q15910 746 aaKnown RBP13.94□□□□□ -0.18
PARVB-206ENST00000477438 CCDC146Q8IYE0 955 aa13.94□□□□□ -0.18
PARVB-206ENST00000477438 KDM6AO15550 1401 aaPredicted RBP13.93□□□□□ -0.18
PARVB-206ENST00000477438 PLSCR1O15162 318 aa13.93□□□□□ -0.18
PARVB-206ENST00000477438 RUNDC1Q96C34 613 aa13.93□□□□□ -0.18
PARVB-206ENST00000477438 PALLDQ8WX93 1383 aa13.93□□□□□ -0.18
PARVB-206ENST00000477438 NFE2L2Q16236 605 aa13.92□□□□□ -0.18
PARVB-206ENST00000477438 SLC27A3Q5K4L6 730 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms