RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 FSD1Q9BTV5 496 aa13.37□□□□□ -0.27
COL27A1-204ENST00000477421 STRN4Q9NRL3 753 aa13.37□□□□□ -0.27
COL27A1-204ENST00000477421 MTHFSDQ2M296 383 aaKnown RBP13.37□□□□□ -0.27
COL27A1-204ENST00000477421 BMP2KLQ5H9B9 411 aa13.37□□□□□ -0.27
COL27A1-204ENST00000477421 SSFA2P28290 1259 aa13.36□□□□□ -0.27
COL27A1-204ENST00000477421 MRE11P49959 708 aa13.36□□□□□ -0.27
COL27A1-204ENST00000477421 CNTROBQ8N137 903 aa13.36□□□□□ -0.27
COL27A1-204ENST00000477421 DNAJC2Q99543 621 aaKnown RBP13.36□□□□□ -0.27
COL27A1-204ENST00000477421 PDIA4P13667 645 aaKnown RBP13.36□□□□□ -0.27
COL27A1-204ENST00000477421 TNRQ92752 1358 aa13.36□□□□□ -0.27
COL27A1-204ENST00000477421 H3BQV1 296 aa13.36□□□□□ -0.27
COL27A1-204ENST00000477421 IFFO2Q5TF58 517 aa13.36□□□□□ -0.27
COL27A1-204ENST00000477421 UHRF1BP1LA0JNW5 1464 aa13.36□□□□□ -0.27
COL27A1-204ENST00000477421 MX1P20591 662 aa13.35□□□□□ -0.27
COL27A1-204ENST00000477421 NASPP49321 788 aaPredicted RBP13.35□□□□□ -0.27
COL27A1-204ENST00000477421 KIAA2012Q0VF49 1180 aa13.35□□□□□ -0.27
COL27A1-204ENST00000477421 SMC5Q8IY18 1101 aa13.35□□□□□ -0.27
COL27A1-204ENST00000477421 FAM184AQ8NB25 1140 aa13.35□□□□□ -0.27
COL27A1-204ENST00000477421 PUS7Q96PZ0 661 aaKnown RBP13.35□□□□□ -0.27
COL27A1-204ENST00000477421 FAM177BA6PVY3 158 aa13.35□□□□□ -0.27
COL27A1-204ENST00000477421 OTUD7AQ8TE49 926 aaPredicted RBP13.35□□□□□ -0.27
COL27A1-204ENST00000477421 FIBPO43427 364 aa13.34□□□□□ -0.27
COL27A1-204ENST00000477421 JARID2Q92833 1246 aaPredicted RBP13.34□□□□□ -0.27
COL27A1-204ENST00000477421 TNPO1Q92973 898 aaKnown RBP13.34□□□□□ -0.27
COL27A1-204ENST00000477421 CCDC85AQ96PX6 553 aaPredicted RBP13.34□□□□□ -0.27
COL27A1-204ENST00000477421 ANO8Q9HCE9 1232 aaPredicted RBP13.34□□□□□ -0.27
COL27A1-204ENST00000477421 MYO5CQ9NQX4 1742 aa13.34□□□□□ -0.27
COL27A1-204ENST00000477421 PI4KAP2A4QPH2 592 aa13.34□□□□□ -0.27
COL27A1-204ENST00000477421 IL13P35225 146 aa13.34□□□□□ -0.27
COL27A1-204ENST00000477421 G2E3Q7L622 706 aa13.34□□□□□ -0.27
COL27A1-204ENST00000477421 TRMT2AQ8IZ69 625 aaKnown RBP13.34□□□□□ -0.27
COL27A1-204ENST00000477421 PI4KAP1Q8N8J0 262 aa13.34□□□□□ -0.27
COL27A1-204ENST00000477421 MAP3K19Q56UN5 1328 aa13.34□□□□□ -0.27
COL27A1-204ENST00000477421 ZMYM3Q14202 1370 aa13.34□□□□□ -0.27
COL27A1-204ENST00000477421 ZBTB7BO15156 539 aaPredicted RBP13.33□□□□□ -0.27
COL27A1-204ENST00000477421 AACSQ86V21 672 aa13.33□□□□□ -0.27
COL27A1-204ENST00000477421 EYA1Q99502 592 aa13.33□□□□□ -0.27
COL27A1-204ENST00000477421 SDSP20132 328 aa13.33□□□□□ -0.28
COL27A1-204ENST00000477421 LRRC59Q96AG4 307 aaKnown RBP13.33□□□□□ -0.28
COL27A1-204ENST00000477421 PTCD1O75127 700 aaKnown RBP13.33□□□□□ -0.28
COL27A1-204ENST00000477421 PREX2Q70Z35 1606 aa13.33□□□□□ -0.28
COL27A1-204ENST00000477421 ABCC1P33527 1531 aa13.33□□□□□ -0.28
COL27A1-204ENST00000477421 POGZQ7Z3K3 1410 aa13.33□□□□□ -0.28
COL27A1-204ENST00000477421 KCNA6P17658 529 aa13.32□□□□□ -0.28
COL27A1-204ENST00000477421 STK3Q13188 491 aa13.32□□□□□ -0.28
COL27A1-204ENST00000477421 FBXW7Q969H0 707 aa13.32□□□□□ -0.28
COL27A1-204ENST00000477421 KDM4AO75164 1064 aa13.32□□□□□ -0.28
COL27A1-204ENST00000477421 APPP05067 770 aa13.32□□□□□ -0.28
COL27A1-204ENST00000477421 TATP17735 454 aaPredicted RBP13.32□□□□□ -0.28
COL27A1-204ENST00000477421 PPP6R1Q9UPN7 881 aa13.32□□□□□ -0.28
COL27A1-204ENST00000477421 ARHGAP45Q92619 1136 aa13.32□□□□□ -0.28
COL27A1-204ENST00000477421 GRPEL1Q9HAV7 217 aa13.31□□□□□ -0.28
COL27A1-204ENST00000477421 ATP6V1DQ9Y5K8 247 aa13.31□□□□□ -0.28
COL27A1-204ENST00000477421 GTF2E1P29083 439 aaPredicted RBP13.31□□□□□ -0.28
COL27A1-204ENST00000477421 PIP4K2AP48426 406 aaPredicted RBP13.31□□□□□ -0.28
COL27A1-204ENST00000477421 SF3A1Q15459 793 aaKnown RBP13.31□□□□□ -0.28
COL27A1-204ENST00000477421 RNF20Q5VTR2 975 aa13.3□□□□□ -0.28
COL27A1-204ENST00000477421 SPG7Q9UQ90 795 aa13.3□□□□□ -0.28
COL27A1-204ENST00000477421 PRDM15P57071 1507 aaPredicted RBP13.3□□□□□ -0.28
COL27A1-204ENST00000477421 PHF14O94880 888 aa13.3□□□□□ -0.28
COL27A1-204ENST00000477421 TTC22Q5TAA0 569 aa13.3□□□□□ -0.28
COL27A1-204ENST00000477421 TOM1L2Q6ZVM7 507 aa13.3□□□□□ -0.28
COL27A1-204ENST00000477421 PPP1R42Q7Z4L9 355 aa13.3□□□□□ -0.28
COL27A1-204ENST00000477421 CCDC8Q9H0W5 538 aaPredicted RBP13.3□□□□□ -0.28
COL27A1-204ENST00000477421 CHD1O14646 1710 aa13.3□□□□□ -0.28
COL27A1-204ENST00000477421 CHRNA2Q15822 529 aa13.3□□□□□ -0.28
COL27A1-204ENST00000477421 GDPD2Q9HCC8 539 aa13.3□□□□□ -0.28
COL27A1-204ENST00000477421 WASHC4Q2M389 1173 aa13.3□□□□□ -0.28
COL27A1-204ENST00000477421 ANKRD44Q8N8A2 993 aa13.3□□□□□ -0.28
COL27A1-204ENST00000477421 CABP4P57796 275 aa13.29□□□□□ -0.28
COL27A1-204ENST00000477421 BICD2Q8TD16 824 aa13.29□□□□□ -0.28
COL27A1-204ENST00000477421 DNAAF4Q8WXU2 420 aa13.29□□□□□ -0.28
COL27A1-204ENST00000477421 BOLA2Q9H3K6 86 aa13.29□□□□□ -0.28
COL27A1-204ENST00000477421 PRDM11Q9NQV5 511 aa13.29□□□□□ -0.28
COL27A1-204ENST00000477421 LTKP29376 864 aa13.29□□□□□ -0.28
COL27A1-204ENST00000477421 SLC39A6Q13433 755 aa13.29□□□□□ -0.28
COL27A1-204ENST00000477421 CHPF2Q9P2E5 772 aa13.29□□□□□ -0.28
COL27A1-204ENST00000477421 PTPRCP08575 1304 aa13.28□□□□□ -0.28
COL27A1-204ENST00000477421 CEBPZQ03701 1054 aaKnown RBP13.28□□□□□ -0.28
COL27A1-204ENST00000477421 JAKMIP1Q96N16 626 aaKnown RBP13.28□□□□□ -0.28
COL27A1-204ENST00000477421 PLEKHF1Q96S99 279 aa13.28□□□□□ -0.28
COL27A1-204ENST00000477421 PANK2Q9BZ23 570 aa13.28□□□□□ -0.28
COL27A1-204ENST00000477421 CSPP1Q1MSJ5 1256 aa13.28□□□□□ -0.28
COL27A1-204ENST00000477421 CEP85Q6P2H3 762 aa13.28□□□□□ -0.28
COL27A1-204ENST00000477421 FERMT3Q86UX7 667 aa13.28□□□□□ -0.28
COL27A1-204ENST00000477421 PHAXQ9H814 394 aaKnown RBP13.28□□□□□ -0.28
COL27A1-204ENST00000477421 SBNO2Q9Y2G9 1366 aa13.27□□□□□ -0.28
COL27A1-204ENST00000477421 DTNBO60941 627 aa13.27□□□□□ -0.28
COL27A1-204ENST00000477421 CHAF1AQ13111 956 aaPredicted RBP13.27□□□□□ -0.28
COL27A1-204ENST00000477421 VSIG10Q8N0Z9 540 aa13.27□□□□□ -0.28
COL27A1-204ENST00000477421 KCNH5Q8NCM2 988 aa13.27□□□□□ -0.28
COL27A1-204ENST00000477421 KIF1BPQ96EK5 621 aa13.27□□□□□ -0.28
COL27A1-204ENST00000477421 PLEKHM2Q8IWE5 1019 aa13.27□□□□□ -0.29
COL27A1-204ENST00000477421 BCL11BQ9C0K0 894 aaPredicted RBP13.27□□□□□ -0.29
COL27A1-204ENST00000477421 CIZ1Q9ULV3 898 aaPredicted RBP13.27□□□□□ -0.29
COL27A1-204ENST00000477421 TRPM2O94759 1503 aa13.27□□□□□ -0.29
COL27A1-204ENST00000477421 HTATSF1O43719 755 aaKnown RBP13.27□□□□□ -0.29
COL27A1-204ENST00000477421 PDE1AP54750 535 aa13.27□□□□□ -0.29
COL27A1-204ENST00000477421 FAM43AQ8N2R8 423 aa13.27□□□□□ -0.29
COL27A1-204ENST00000477421 DCTPP1Q9H773 170 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms