RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 SMG6Q86US8 1419 aaKnown RBP21.38■■□□□ 1.01
COMMD6-209ENST00000477377 RGPD3A6NKT7 1758 aaPredicted RBP21.38■■□□□ 1.01
COMMD6-209ENST00000477377 RGPD4Q7Z3J3 1758 aa21.38■■□□□ 1.01
COMMD6-209ENST00000477377 NHSQ6T4R5 1651 aa21.38■■□□□ 1.01
COMMD6-209ENST00000477377 ZCRB1Q8TBF4 217 aaKnown RBP21.38■■□□□ 1.01
COMMD6-209ENST00000477377 DDX54Q8TDD1 881 aaKnown RBP21.38■■□□□ 1.01
COMMD6-209ENST00000477377 EYA1Q99502 592 aa21.38■■□□□ 1.01
COMMD6-209ENST00000477377 R3HDM1Q15032 1099 aaKnown RBP21.37■■□□□ 1.01
COMMD6-209ENST00000477377 KNSTRNQ9Y448 316 aa21.36■■□□□ 1.01
COMMD6-209ENST00000477377 EIF4A2Q14240 407 aaKnown RBP21.35■■□□□ 1.01
COMMD6-209ENST00000477377 MORC1Q86VD1 984 aa21.33■■□□□ 1.01
COMMD6-209ENST00000477377 RAPGEF4Q8WZA2 1011 aa21.33■■□□□ 1.01
COMMD6-209ENST00000477377 TATP17735 454 aaPredicted RBP21.32■■□□□ 1
COMMD6-209ENST00000477377 TXNRD1Q16881 649 aa21.32■■□□□ 1
COMMD6-209ENST00000477377 ANO8Q9HCE9 1232 aaPredicted RBP21.32■■□□□ 1
COMMD6-209ENST00000477377 BTAF1O14981 1849 aa21.31■■□□□ 1
COMMD6-209ENST00000477377 CYP27B1O15528 508 aa21.3■■□□□ 1
COMMD6-209ENST00000477377 PRIM1P49642 420 aaKnown RBP21.29■■□□□ 1
COMMD6-209ENST00000477377 NBPF14Q5TI25 921 aa21.28■■□□□ 1
COMMD6-209ENST00000477377 PKD1L3Q7Z443 1732 aa21.28■■□□□ 1
COMMD6-209ENST00000477377 IGSF1Q8N6C5 1336 aa21.28■■□□□ 1
COMMD6-209ENST00000477377 DOT1LQ8TEK3 1739 aa21.27■■□□□ 1
COMMD6-209ENST00000477377 LRP5O75197 1615 aa21.26■□□□□ 0.99
COMMD6-209ENST00000477377 LRRC4BQ9NT99 713 aa21.26■□□□□ 0.99
COMMD6-209ENST00000477377 PCDH11XQ9BZA7 1347 aa21.26■□□□□ 0.99
COMMD6-209ENST00000477377 PCDH11YQ9BZA8 1340 aa21.26■□□□□ 0.99
COMMD6-209ENST00000477377 KAT6BQ8WYB5 2073 aa21.25■□□□□ 0.99
COMMD6-209ENST00000477377 NPC1L1Q9UHC9 1359 aa21.25■□□□□ 0.99
COMMD6-209ENST00000477377 IL13P35225 146 aa21.25■□□□□ 0.99
COMMD6-209ENST00000477377 CC2D1BQ5T0F9 858 aaKnown RBP21.25■□□□□ 0.99
COMMD6-209ENST00000477377 NKX1-1Q15270 411 aaPredicted RBP21.24■□□□□ 0.99
COMMD6-209ENST00000477377 PDGFDQ9GZP0 370 aaPredicted RBP21.24■□□□□ 0.99
COMMD6-209ENST00000477377 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.24■□□□□ 0.99
COMMD6-209ENST00000477377 PAPPAQ13219 1627 aa21.23■□□□□ 0.99
COMMD6-209ENST00000477377 MTHFSP49914 203 aa21.22■□□□□ 0.99
COMMD6-209ENST00000477377 TOGARAM1Q9Y4F4 1720 aa21.21■□□□□ 0.99
COMMD6-209ENST00000477377 SYTL4Q96C24 671 aaPredicted RBP21.21■□□□□ 0.99
COMMD6-209ENST00000477377 SLC15A2Q16348 729 aa21.2■□□□□ 0.98
COMMD6-209ENST00000477377 AEBP1Q8IUX7 1158 aa21.2■□□□□ 0.98
COMMD6-209ENST00000477377 CASZ1Q86V15 1759 aa21.19■□□□□ 0.98
COMMD6-209ENST00000477377 SPG7Q9UQ90 795 aa21.19■□□□□ 0.98
COMMD6-209ENST00000477377 PLEKHG2Q9H7P9 1386 aa21.19■□□□□ 0.98
COMMD6-209ENST00000477377 LY75O60449 1722 aa21.18■□□□□ 0.98
COMMD6-209ENST00000477377 PHKG2P15735 406 aa21.18■□□□□ 0.98
COMMD6-209ENST00000477377 KCNQ4P56696 695 aa21.18■□□□□ 0.98
COMMD6-209ENST00000477377 ZNF827Q17R98 1081 aa21.18■□□□□ 0.98
COMMD6-209ENST00000477377 AKT1S1Q96B36 256 aa21.17■□□□□ 0.98
COMMD6-209ENST00000477377 KDRP35968 1356 aa21.17■□□□□ 0.98
COMMD6-209ENST00000477377 SLC27A3Q5K4L6 730 aa21.16■□□□□ 0.98
COMMD6-209ENST00000477377 SULT6B1Q6IMI4 303 aa21.15■□□□□ 0.98
COMMD6-209ENST00000477377 IFNL2Q8IZJ0 200 aa21.15■□□□□ 0.98
COMMD6-209ENST00000477377 PIGBQ92521 554 aa21.15■□□□□ 0.98
COMMD6-209ENST00000477377 STK32BQ9NY57 414 aa21.15■□□□□ 0.98
COMMD6-209ENST00000477377 ITGB4P16144 1822 aa21.15■□□□□ 0.98
COMMD6-209ENST00000477377 MPRIPQ6WCQ1 1025 aa21.14■□□□□ 0.97
COMMD6-209ENST00000477377 COL3A1P02461 1466 aaPredicted RBP21.13■□□□□ 0.97
COMMD6-209ENST00000477377 CNGB1Q14028 1251 aaPredicted RBP21.13■□□□□ 0.97
COMMD6-209ENST00000477377 PLEKHO1Q53GL0 409 aaPredicted RBP21.1■□□□□ 0.97
COMMD6-209ENST00000477377 CCNL1Q9UK58 526 aaPredicted RBP21.1■□□□□ 0.97
COMMD6-209ENST00000477377 AMOTQ4VCS5 1084 aa21.09■□□□□ 0.97
COMMD6-209ENST00000477377 SPON1Q9HCB6 807 aa21.09■□□□□ 0.97
COMMD6-209ENST00000477377 KDM6AO15550 1401 aaPredicted RBP21.09■□□□□ 0.97
COMMD6-209ENST00000477377 PALLDQ8WX93 1383 aa21.09■□□□□ 0.97
COMMD6-209ENST00000477377 DIAPH1O60610 1272 aaKnown RBP21.08■□□□□ 0.97
COMMD6-209ENST00000477377 ZBTB7AO95365 584 aa21.08■□□□□ 0.97
COMMD6-209ENST00000477377 PTGER2P43116 358 aa21.08■□□□□ 0.97
COMMD6-209ENST00000477377 SGIP1Q9BQI5 828 aa21.07■□□□□ 0.96
COMMD6-209ENST00000477377 PNPLA7Q6ZV29 1317 aa21.06■□□□□ 0.96
COMMD6-209ENST00000477377 HMOX1P09601 288 aa21.06■□□□□ 0.96
COMMD6-209ENST00000477377 ZNF530Q6P9A1 599 aaPredicted RBP21.06■□□□□ 0.96
COMMD6-209ENST00000477377 ASAP1Q9ULH1 1129 aa21.06■□□□□ 0.96
COMMD6-209ENST00000477377 QSER1Q2KHR3 1735 aa21.05■□□□□ 0.96
COMMD6-209ENST00000477377 PPP2R1AP30153 589 aa21.05■□□□□ 0.96
COMMD6-209ENST00000477377 DCAF5Q96JK2 942 aa21.05■□□□□ 0.96
COMMD6-209ENST00000477377 ATG3Q9NT62 314 aa21.05■□□□□ 0.96
COMMD6-209ENST00000477377 TUBGCP6Q96RT7 1819 aa21.05■□□□□ 0.96
COMMD6-209ENST00000477377 ERVV-2B6SEH9 535 aa21.04■□□□□ 0.96
COMMD6-209ENST00000477377 SMARCC1Q92922 1105 aaPredicted RBP21.04■□□□□ 0.96
COMMD6-209ENST00000477377 TMOD3Q9NYL9 352 aa21.04■□□□□ 0.96
COMMD6-209ENST00000477377 ATF5Q9Y2D1 282 aaPredicted RBP21.04■□□□□ 0.96
COMMD6-209ENST00000477377 TAF1LQ8IZX4 1826 aa21.03■□□□□ 0.96
COMMD6-209ENST00000477377 HSP90AB1P08238 724 aaKnown RBP21.02■□□□□ 0.96
COMMD6-209ENST00000477377 MTFR1LQ9H019 292 aa21.02■□□□□ 0.96
COMMD6-209ENST00000477377 LOC102724428A0A0B4J2F2 783 aa21.01■□□□□ 0.95
COMMD6-209ENST00000477377 SIK1P57059 783 aa21.01■□□□□ 0.95
COMMD6-209ENST00000477377 MTHFSDQ2M296 383 aaKnown RBP21.01■□□□□ 0.95
COMMD6-209ENST00000477377 AMIGO3Q86WK7 504 aa21.01■□□□□ 0.95
COMMD6-209ENST00000477377 SLC4A9Q96Q91 983 aa21.01■□□□□ 0.95
COMMD6-209ENST00000477377 C5P01031 1676 aa21.01■□□□□ 0.95
COMMD6-209ENST00000477377 AKAP4Q5JQC9 854 aa21■□□□□ 0.95
COMMD6-209ENST00000477377 TFCP2L1Q9NZI6 479 aa21■□□□□ 0.95
COMMD6-209ENST00000477377 ITPK1Q13572 414 aa20.99■□□□□ 0.95
COMMD6-209ENST00000477377 COL23A1Q86Y22 540 aaPredicted RBP20.99■□□□□ 0.95
COMMD6-209ENST00000477377 LGR6Q9HBX8 967 aa20.99■□□□□ 0.95
COMMD6-209ENST00000477377 COL24A1Q17RW2 1714 aa20.98■□□□□ 0.95
COMMD6-209ENST00000477377 C1orf141Q5JVX7 400 aa20.98■□□□□ 0.95
COMMD6-209ENST00000477377 LINC00116Q8NCU8 138 aa20.98■□□□□ 0.95
COMMD6-209ENST00000477377 NFATC2IPQ8NCF5 419 aa20.97■□□□□ 0.95
COMMD6-209ENST00000477377 C4BP0C0L5 1744 aa20.97■□□□□ 0.95
COMMD6-209ENST00000477377 SCN11AQ9UI33 1791 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 186.1 ms