RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 TTC21AQ8NDW8 1320 aa10.71□□□□□ -0.69
PRPF3-205ENST00000476970 CICQ96RK0 1608 aaPredicted RBP10.71□□□□□ -0.69
PRPF3-205ENST00000476970 CENPJQ9HC77 1338 aaPredicted RBP10.71□□□□□ -0.69
PRPF3-205ENST00000476970 CABP2Q9NPB3 220 aa10.71□□□□□ -0.69
PRPF3-205ENST00000476970 NLRP2Q9NX02 1062 aa10.71□□□□□ -0.69
PRPF3-205ENST00000476970 C5P01031 1676 aa10.7□□□□□ -0.7
PRPF3-205ENST00000476970 USP54Q70EL1 1684 aa10.7□□□□□ -0.7
PRPF3-205ENST00000476970 TOMM70O94826 608 aa10.7□□□□□ -0.7
PRPF3-205ENST00000476970 DNAJC5GQ8N7S2 189 aa10.7□□□□□ -0.7
PRPF3-205ENST00000476970 CABP1Q9NZU7 370 aa10.7□□□□□ -0.7
PRPF3-205ENST00000476970 COL13A1Q5TAT6 717 aaPredicted RBP10.69□□□□□ -0.7
PRPF3-205ENST00000476970 ANKRD36BQ8N2N9 1353 aa10.68□□□□□ -0.7
PRPF3-205ENST00000476970 TTC21BQ7Z4L5 1316 aa10.68□□□□□ -0.7
PRPF3-205ENST00000476970 MSL1Q68DK7 614 aa10.68□□□□□ -0.7
PRPF3-205ENST00000476970 FLAD1Q8NFF5 587 aa10.68□□□□□ -0.7
PRPF3-205ENST00000476970 SYTL4Q96C24 671 aaPredicted RBP10.68□□□□□ -0.7
PRPF3-205ENST00000476970 ZNF692Q9BU19 519 aaPredicted RBP10.68□□□□□ -0.7
PRPF3-205ENST00000476970 CCNL1Q9UK58 526 aaPredicted RBP10.68□□□□□ -0.7
PRPF3-205ENST00000476970 TAF1LQ8IZX4 1826 aa10.68□□□□□ -0.7
PRPF3-205ENST00000476970 MON2Q7Z3U7 1717 aa10.67□□□□□ -0.7
PRPF3-205ENST00000476970 IGSF1Q8N6C5 1336 aa10.67□□□□□ -0.7
PRPF3-205ENST00000476970 COL23A1Q86Y22 540 aaPredicted RBP10.67□□□□□ -0.7
PRPF3-205ENST00000476970 JMYQ8N9B5 988 aa10.67□□□□□ -0.7
PRPF3-205ENST00000476970 KLRG1Q96E93 195 aa10.67□□□□□ -0.7
PRPF3-205ENST00000476970 USP47Q96K76 1375 aa10.65□□□□□ -0.7
PRPF3-205ENST00000476970 EVC2Q86UK5 1308 aa10.65□□□□□ -0.7
PRPF3-205ENST00000476970 KCNQ4P56696 695 aa10.65□□□□□ -0.7
PRPF3-205ENST00000476970 NSD3Q9BZ95 1437 aa10.65□□□□□ -0.7
PRPF3-205ENST00000476970 PCNTO95613 3336 aa10.64□□□□□ -0.71
PRPF3-205ENST00000476970 C16orf71Q8IYS4 520 aaPredicted RBP10.64□□□□□ -0.71
PRPF3-205ENST00000476970 RBM46Q8TBY0 533 aaKnown RBP10.64□□□□□ -0.71
PRPF3-205ENST00000476970 DDX54Q8TDD1 881 aaKnown RBP10.64□□□□□ -0.71
PRPF3-205ENST00000476970 ANKRD24Q8TF21 1146 aa10.64□□□□□ -0.71
PRPF3-205ENST00000476970 NSD2O96028 1365 aa10.64□□□□□ -0.71
PRPF3-205ENST00000476970 PRIM1P49642 420 aaKnown RBP10.63□□□□□ -0.71
PRPF3-205ENST00000476970 UBR3Q6ZT12 1888 aa10.63□□□□□ -0.71
PRPF3-205ENST00000476970 USP31Q70CQ4 1352 aa10.63□□□□□ -0.71
PRPF3-205ENST00000476970 KTN1Q86UP2 1357 aaKnown RBP10.63□□□□□ -0.71
PRPF3-205ENST00000476970 C4BP0C0L5 1744 aa10.62□□□□□ -0.71
PRPF3-205ENST00000476970 SLC34A2O95436 690 aa10.62□□□□□ -0.71
PRPF3-205ENST00000476970 FSTL1Q12841 308 aa10.62□□□□□ -0.71
PRPF3-205ENST00000476970 POTEHQ6S545 545 aa10.62□□□□□ -0.71
PRPF3-205ENST00000476970 KIF13BQ9NQT8 1826 aa10.62□□□□□ -0.71
PRPF3-205ENST00000476970 TNRC6CQ9HCJ0 1690 aaKnown RBP10.62□□□□□ -0.71
PRPF3-205ENST00000476970 PLEKHG2Q9H7P9 1386 aa10.62□□□□□ -0.71
PRPF3-205ENST00000476970 PKD1L3Q7Z443 1732 aa10.61□□□□□ -0.71
PRPF3-205ENST00000476970 WWC3Q9ULE0 1092 aa10.61□□□□□ -0.71
PRPF3-205ENST00000476970 RAB3GAP2Q9H2M9 1393 aa10.61□□□□□ -0.71
PRPF3-205ENST00000476970 TOGARAM1Q9Y4F4 1720 aa10.6□□□□□ -0.71
PRPF3-205ENST00000476970 C10orf71Q711Q0 1435 aa10.59□□□□□ -0.71
PRPF3-205ENST00000476970 NBPF1Q3BBV0 1214 aa10.59□□□□□ -0.71
PRPF3-205ENST00000476970 AK7Q96M32 723 aa10.59□□□□□ -0.71
PRPF3-205ENST00000476970 NMRK2Q9NPI5 230 aa10.59□□□□□ -0.71
PRPF3-205ENST00000476970 N4BP2Q86UW6 1770 aaPredicted RBP10.59□□□□□ -0.71
PRPF3-205ENST00000476970 KIAA1551Q9HCM1 1747 aa10.58□□□□□ -0.72
PRPF3-205ENST00000476970 ARFGEF1Q9Y6D6 1849 aa10.58□□□□□ -0.72
PRPF3-205ENST00000476970 BRCA1P38398 1863 aaKnown RBP10.58□□□□□ -0.72
PRPF3-205ENST00000476970 RGPD2P0DJD1 1756 aa10.57□□□□□ -0.72
PRPF3-205ENST00000476970 PXDNLA1KZ92 1463 aa10.57□□□□□ -0.72
PRPF3-205ENST00000476970 PALLDQ8WX93 1383 aa10.57□□□□□ -0.72
PRPF3-205ENST00000476970 HTRA3P83110 453 aa10.57□□□□□ -0.72
PRPF3-205ENST00000476970 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.57□□□□□ -0.72
PRPF3-205ENST00000476970 ZCRB1Q8TBF4 217 aaKnown RBP10.57□□□□□ -0.72
PRPF3-205ENST00000476970 KDM2BQ8NHM5 1336 aa10.57□□□□□ -0.72
PRPF3-205ENST00000476970 HSPA1AP0DMV8 641 aaKnown RBP10.56□□□□□ -0.72
PRPF3-205ENST00000476970 HSPA1BP0DMV9 641 aaKnown RBP10.56□□□□□ -0.72
PRPF3-205ENST00000476970 MEGF6O75095 1541 aa10.56□□□□□ -0.72
PRPF3-205ENST00000476970 ITGB4P16144 1822 aa10.56□□□□□ -0.72
PRPF3-205ENST00000476970 CGNL1Q0VF96 1302 aa10.56□□□□□ -0.72
PRPF3-205ENST00000476970 PHF14O94880 888 aa10.55□□□□□ -0.72
PRPF3-205ENST00000476970 SSFA2P28290 1259 aa10.55□□□□□ -0.72
PRPF3-205ENST00000476970 SMC1BQ8NDV3 1235 aa10.55□□□□□ -0.72
PRPF3-205ENST00000476970 IP6K1Q92551 441 aa10.55□□□□□ -0.72
PRPF3-205ENST00000476970 PCDH10Q9P2E7 1040 aa10.55□□□□□ -0.72
PRPF3-205ENST00000476970 BCS1LQ9Y276 419 aa10.55□□□□□ -0.72
PRPF3-205ENST00000476970 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.54□□□□□ -0.72
PRPF3-205ENST00000476970 TGFB2P61812 414 aa10.54□□□□□ -0.72
PRPF3-205ENST00000476970 EDC4Q6P2E9 1401 aaKnown RBP10.54□□□□□ -0.72
PRPF3-205ENST00000476970 ARHGAP27Q6ZUM4 889 aa10.54□□□□□ -0.72
PRPF3-205ENST00000476970 NME9Q86XW9 330 aa10.54□□□□□ -0.72
PRPF3-205ENST00000476970 SMARCC1Q92922 1105 aaPredicted RBP10.54□□□□□ -0.72
PRPF3-205ENST00000476970 LTV1Q96GA3 475 aaPredicted RBP10.54□□□□□ -0.72
PRPF3-205ENST00000476970 U3KPZ7 1027 aaPredicted RBP10.54□□□□□ -0.72
PRPF3-205ENST00000476970 KCPQ6ZWJ8 1503 aa10.53□□□□□ -0.72
PRPF3-205ENST00000476970 SBNO2Q9Y2G9 1366 aa10.53□□□□□ -0.72
PRPF3-205ENST00000476970 PCDH11XQ9BZA7 1347 aa10.53□□□□□ -0.72
PRPF3-205ENST00000476970 PCDH11YQ9BZA8 1340 aa10.53□□□□□ -0.72
PRPF3-205ENST00000476970 SMG6Q86US8 1419 aaKnown RBP10.52□□□□□ -0.73
PRPF3-205ENST00000476970 DSG3P32926 999 aa10.52□□□□□ -0.73
PRPF3-205ENST00000476970 C9orf131Q5VYM1 1079 aa10.52□□□□□ -0.73
PRPF3-205ENST00000476970 HDGFL2Q7Z4V5 671 aaPredicted RBP10.52□□□□□ -0.73
PRPF3-205ENST00000476970 SBF1O95248 1867 aa10.52□□□□□ -0.73
PRPF3-205ENST00000476970 MAP2P11137 1827 aaKnown RBP10.51□□□□□ -0.73
PRPF3-205ENST00000476970 C4AP0C0L4 1744 aa10.51□□□□□ -0.73
PRPF3-205ENST00000476970 FCHSD2O94868 740 aa10.51□□□□□ -0.73
PRPF3-205ENST00000476970 RAPGEF4Q8WZA2 1011 aa10.51□□□□□ -0.73
PRPF3-205ENST00000476970 RTL1A6NKG5 1358 aa10.51□□□□□ -0.73
PRPF3-205ENST00000476970 CD163L1Q9NR16 1453 aa10.5□□□□□ -0.73
PRPF3-205ENST00000476970 MMP10P09238 476 aa10.5□□□□□ -0.73
PRPF3-205ENST00000476970 CCDC87Q9NVE4 849 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms