RNA–Protein interactions for RNA: ENST00000476931.1

RPN1-202, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 526 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-202ENST00000476931 PNNQ9H307 717 aaKnown RBP22.6■■□□□ 1.21
RPN1-202ENST00000476931 PARP4Q9UKK3 1724 aaKnown RBP22.6■■□□□ 1.21
RPN1-202ENST00000476931 U2AF1L5P0DN76 240 aaPredicted RBP22.59■■□□□ 1.21
RPN1-202ENST00000476931 U2AF1Q01081 240 aaKnown RBP eCLIP22.59■■□□□ 1.21
RPN1-202ENST00000476931 TNS2Q63HR2 1409 aa22.58■■□□□ 1.21
RPN1-202ENST00000476931 MARCH10Q8NA82 808 aaPredicted RBP22.58■■□□□ 1.21
RPN1-202ENST00000476931 AEBP1Q8IUX7 1158 aa22.57■■□□□ 1.2
RPN1-202ENST00000476931 DDX54Q8TDD1 881 aaKnown RBP22.57■■□□□ 1.2
RPN1-202ENST00000476931 MEGF6O75095 1541 aa22.57■■□□□ 1.2
RPN1-202ENST00000476931 BCL9O00512 1426 aa22.57■■□□□ 1.2
RPN1-202ENST00000476931 PCDH11XQ9BZA7 1347 aa22.57■■□□□ 1.2
RPN1-202ENST00000476931 PCDH11YQ9BZA8 1340 aa22.57■■□□□ 1.2
RPN1-202ENST00000476931 RGPD2P0DJD1 1756 aa22.56■■□□□ 1.2
RPN1-202ENST00000476931 HMOX1P09601 288 aa22.56■■□□□ 1.2
RPN1-202ENST00000476931 IFNL2Q8IZJ0 200 aa22.54■■□□□ 1.2
RPN1-202ENST00000476931 SOCS7O14512 581 aa22.53■■□□□ 1.2
RPN1-202ENST00000476931 RGPD1P0DJD0 1748 aa22.53■■□□□ 1.2
RPN1-202ENST00000476931 NEFMP07197 916 aa22.52■■□□□ 1.2
RPN1-202ENST00000476931 DIEXFQ68CQ4 756 aaKnown RBP22.52■■□□□ 1.2
RPN1-202ENST00000476931 BRWD3Q6RI45 1802 aa22.52■■□□□ 1.2
RPN1-202ENST00000476931 WNK3Q9BYP7 1800 aa22.52■■□□□ 1.2
RPN1-202ENST00000476931 HSP90AB1P08238 724 aaKnown RBP22.51■■□□□ 1.19
RPN1-202ENST00000476931 WDR43Q15061 677 aaKnown RBP eCLIP22.51■■□□□ 1.19
RPN1-202ENST00000476931 NKX1-1Q15270 411 aaPredicted RBP22.51■■□□□ 1.19
RPN1-202ENST00000476931 FAM182BQ5T319 152 aa22.51■■□□□ 1.19
RPN1-202ENST00000476931 RSPH6AQ9H0K4 717 aa22.51■■□□□ 1.19
RPN1-202ENST00000476931 LRRC37A3O60309 1634 aa22.5■■□□□ 1.19
RPN1-202ENST00000476931 CYP27B1O15528 508 aa22.5■■□□□ 1.19
RPN1-202ENST00000476931 UPF1Q92900 1129 aaKnown RBP eCLIP22.5■■□□□ 1.19
RPN1-202ENST00000476931 SF3B2Q13435 895 aaKnown RBP22.49■■□□□ 1.19
RPN1-202ENST00000476931 C1orf141Q5JVX7 400 aa22.49■■□□□ 1.19
RPN1-202ENST00000476931 PHKG2P15735 406 aa22.48■■□□□ 1.19
RPN1-202ENST00000476931 PRKAR2BP31323 418 aa22.48■■□□□ 1.19
RPN1-202ENST00000476931 GAS2L2Q8NHY3 880 aa22.48■■□□□ 1.19
RPN1-202ENST00000476931 ZNF530Q6P9A1 599 aaPredicted RBP22.47■■□□□ 1.19
RPN1-202ENST00000476931 BCL11BQ9C0K0 894 aaPredicted RBP22.47■■□□□ 1.19
RPN1-202ENST00000476931 AKAP4Q5JQC9 854 aa22.46■■□□□ 1.19
RPN1-202ENST00000476931 TRIM37O94972 964 aa22.45■■□□□ 1.18
RPN1-202ENST00000476931 DCAF5Q96JK2 942 aa22.45■■□□□ 1.18
RPN1-202ENST00000476931 MRS2Q9HD23 443 aa22.45■■□□□ 1.18
RPN1-202ENST00000476931 MTHFSDQ2M296 383 aaKnown RBP22.44■■□□□ 1.18
RPN1-202ENST00000476931 PHACTR3Q96KR7 559 aa22.43■■□□□ 1.18
RPN1-202ENST00000476931 PLEKHF1Q96S99 279 aa22.43■■□□□ 1.18
RPN1-202ENST00000476931 ADAMTS8Q9UP79 889 aa22.43■■□□□ 1.18
RPN1-202ENST00000476931 ERVV-2B6SEH9 535 aa22.42■■□□□ 1.18
RPN1-202ENST00000476931 PNISRQ8TF01 805 aaKnown RBP22.42■■□□□ 1.18
RPN1-202ENST00000476931 EP400Q96L91 3159 aa22.42■■□□□ 1.18
RPN1-202ENST00000476931 PKD1L3Q7Z443 1732 aa22.41■■□□□ 1.18
RPN1-202ENST00000476931 CCER2I3L3R5 266 aa22.41■■□□□ 1.18
RPN1-202ENST00000476931 MAPK8IP3Q9UPT6 1336 aa22.4■■□□□ 1.18
RPN1-202ENST00000476931 BAG6P46379 1132 aa22.4■■□□□ 1.18
RPN1-202ENST00000476931 PRIM1P49642 420 aaKnown RBP22.4■■□□□ 1.18
RPN1-202ENST00000476931 GNAT3A8MTJ3 354 aa22.39■■□□□ 1.17
RPN1-202ENST00000476931 HTATSF1O43719 755 aaKnown RBP22.39■■□□□ 1.17
RPN1-202ENST00000476931 APBA3O96018 575 aa22.39■■□□□ 1.17
RPN1-202ENST00000476931 CCDC184Q52MB2 194 aa22.39■■□□□ 1.17
RPN1-202ENST00000476931 RUNDC1Q96C34 613 aa22.39■■□□□ 1.17
RPN1-202ENST00000476931 ACSBG1Q96GR2 724 aa22.39■■□□□ 1.17
RPN1-202ENST00000476931 PLSCR1O15162 318 aa22.38■■□□□ 1.17
RPN1-202ENST00000476931 KCNQ2O43526 872 aa22.37■■□□□ 1.17
RPN1-202ENST00000476931 SYTL4Q96C24 671 aaPredicted RBP22.37■■□□□ 1.17
RPN1-202ENST00000476931 RTF1Q92541 710 aaKnown RBP22.36■■□□□ 1.17
RPN1-202ENST00000476931 HMGB2P26583 209 aaKnown RBP22.35■■□□□ 1.17
RPN1-202ENST00000476931 NFE2L2Q16236 605 aa22.35■■□□□ 1.17
RPN1-202ENST00000476931 MPRIPQ6WCQ1 1025 aa22.35■■□□□ 1.17
RPN1-202ENST00000476931 SHANK3Q9BYB0 1731 aa22.34■■□□□ 1.17
RPN1-202ENST00000476931 RNMTO43148 476 aaKnown RBP22.34■■□□□ 1.17
RPN1-202ENST00000476931 CABP4P57796 275 aa22.34■■□□□ 1.17
RPN1-202ENST00000476931 TMOD3Q9NYL9 352 aa22.34■■□□□ 1.17
RPN1-202ENST00000476931 MAP3K5Q99683 1374 aa22.34■■□□□ 1.17
RPN1-202ENST00000476931 SMARCC1Q92922 1105 aaPredicted RBP22.32■■□□□ 1.16
RPN1-202ENST00000476931 LMOD3Q0VAK6 560 aa22.31■■□□□ 1.16
RPN1-202ENST00000476931 PTF1AQ7RTS3 328 aa22.31■■□□□ 1.16
RPN1-202ENST00000476931 PIGBQ92521 554 aa22.31■■□□□ 1.16
RPN1-202ENST00000476931 LGR6Q9HBX8 967 aa22.31■■□□□ 1.16
RPN1-202ENST00000476931 KAT6BQ8WYB5 2073 aa22.3■■□□□ 1.16
RPN1-202ENST00000476931 TMPOP42166 694 aaKnown RBP22.3■■□□□ 1.16
RPN1-202ENST00000476931 IL17REQ8NFR9 667 aa22.3■■□□□ 1.16
RPN1-202ENST00000476931 CAMKK2Q96RR4 588 aa22.3■■□□□ 1.16
RPN1-202ENST00000476931 SLC52A2Q9HAB3 445 aa22.3■■□□□ 1.16
RPN1-202ENST00000476931 RIPK4P57078 832 aa22.29■■□□□ 1.16
RPN1-202ENST00000476931 EN1Q05925 392 aaPredicted RBP22.29■■□□□ 1.16
RPN1-202ENST00000476931 CCDC146Q8IYE0 955 aa22.29■■□□□ 1.16
RPN1-202ENST00000476931 MIER1Q8N108 512 aa22.29■■□□□ 1.16
RPN1-202ENST00000476931 NFATC2IPQ8NCF5 419 aa22.29■■□□□ 1.16
RPN1-202ENST00000476931 SBF2Q86WG5 1849 aa22.29■■□□□ 1.16
RPN1-202ENST00000476931 TEFQ10587 303 aa22.28■■□□□ 1.16
RPN1-202ENST00000476931 DEFB132Q7Z7B7 95 aa22.28■■□□□ 1.16
RPN1-202ENST00000476931 KDM6AO15550 1401 aaPredicted RBP22.28■■□□□ 1.16
RPN1-202ENST00000476931 NCBP3Q53F19 620 aaKnown RBP22.27■■□□□ 1.16
RPN1-202ENST00000476931 NHSQ6T4R5 1651 aa22.26■■□□□ 1.15
RPN1-202ENST00000476931 FAM9BQ8IZU0 186 aa22.26■■□□□ 1.15
RPN1-202ENST00000476931 CEMIPQ8WUJ3 1361 aa22.25■■□□□ 1.15
RPN1-202ENST00000476931 SLC27A3Q5K4L6 730 aa22.25■■□□□ 1.15
RPN1-202ENST00000476931 APAF1O14727 1248 aa22.24■■□□□ 1.15
RPN1-202ENST00000476931 EZH2Q15910 746 aaKnown RBP22.24■■□□□ 1.15
RPN1-202ENST00000476931 NGEFQ8N5V2 710 aa22.24■■□□□ 1.15
RPN1-202ENST00000476931 TXNRD1Q16881 649 aa22.23■■□□□ 1.15
RPN1-202ENST00000476931 ATG3Q9NT62 314 aa22.23■■□□□ 1.15
RPN1-202ENST00000476931 MCM10Q7L590 875 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms