RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 SYTL4Q96C24 671 aaPredicted RBP16.23■□□□□ 0.19
BRCA1-213ENST00000476777 SIN3AQ96ST3 1273 aa16.23■□□□□ 0.19
BRCA1-213ENST00000476777 SLC12A5Q9H2X9 1139 aa16.23■□□□□ 0.19
BRCA1-213ENST00000476777 ANKRD36BQ8N2N9 1353 aa16.23■□□□□ 0.19
BRCA1-213ENST00000476777 EDC4Q6P2E9 1401 aaKnown RBP16.22■□□□□ 0.19
BRCA1-213ENST00000476777 HDGFL2Q7Z4V5 671 aaPredicted RBP16.22■□□□□ 0.19
BRCA1-213ENST00000476777 LTV1Q96GA3 475 aaPredicted RBP16.22■□□□□ 0.19
BRCA1-213ENST00000476777 NSD2O96028 1365 aa16.22■□□□□ 0.19
BRCA1-213ENST00000476777 LY75O60449 1722 aa16.21■□□□□ 0.19
BRCA1-213ENST00000476777 COL23A1Q86Y22 540 aaPredicted RBP16.2■□□□□ 0.18
BRCA1-213ENST00000476777 A0A1W2PP64 1363 aa16.19■□□□□ 0.18
BRCA1-213ENST00000476777 CCNL1Q9UK58 526 aaPredicted RBP16.19■□□□□ 0.18
BRCA1-213ENST00000476777 FAM208AQ9UK61 1670 aaKnown RBP16.18■□□□□ 0.18
BRCA1-213ENST00000476777 ZCRB1Q8TBF4 217 aaKnown RBP16.18■□□□□ 0.18
BRCA1-213ENST00000476777 TERF2IPQ9NYB0 399 aa16.18■□□□□ 0.18
BRCA1-213ENST00000476777 DOT1LQ8TEK3 1739 aa16.18■□□□□ 0.18
BRCA1-213ENST00000476777 NEUROD1Q13562 356 aa16.17■□□□□ 0.18
BRCA1-213ENST00000476777 ATP10DQ9P241 1426 aa16.17■□□□□ 0.18
BRCA1-213ENST00000476777 HOXC9P31274 260 aa16.16■□□□□ 0.18
BRCA1-213ENST00000476777 MSL1Q68DK7 614 aa16.16■□□□□ 0.18
BRCA1-213ENST00000476777 MAP3K19Q56UN5 1328 aa16.16■□□□□ 0.18
BRCA1-213ENST00000476777 MEGF6O75095 1541 aa16.15■□□□□ 0.18
BRCA1-213ENST00000476777 CARD11Q9BXL7 1154 aa16.15■□□□□ 0.18
BRCA1-213ENST00000476777 USP47Q96K76 1375 aa16.14■□□□□ 0.17
BRCA1-213ENST00000476777 FBLN1P23142 703 aa16.14■□□□□ 0.17
BRCA1-213ENST00000476777 PUS7Q96PZ0 661 aaKnown RBP16.14■□□□□ 0.17
BRCA1-213ENST00000476777 CD2APQ9Y5K6 639 aa16.14■□□□□ 0.17
BRCA1-213ENST00000476777 RGPD2P0DJD1 1756 aa16.13■□□□□ 0.17
BRCA1-213ENST00000476777 AMPHP49418 695 aa16.13■□□□□ 0.17
BRCA1-213ENST00000476777 COG3Q96JB2 828 aa16.12■□□□□ 0.17
BRCA1-213ENST00000476777 GPBP1L1Q9HC44 474 aaPredicted RBP16.12■□□□□ 0.17
BRCA1-213ENST00000476777 ADCY9O60503 1353 aa16.12■□□□□ 0.17
BRCA1-213ENST00000476777 NBPF6Q5VWK0 638 aa16.11■□□□□ 0.17
BRCA1-213ENST00000476777 NBPF4Q96M43 638 aa16.11■□□□□ 0.17
BRCA1-213ENST00000476777 HSPA6P17066 643 aa16.1■□□□□ 0.17
BRCA1-213ENST00000476777 FLAD1Q8NFF5 587 aa16.1■□□□□ 0.17
BRCA1-213ENST00000476777 CGNL1Q0VF96 1302 aa16.1■□□□□ 0.17
BRCA1-213ENST00000476777 C5P01031 1676 aa16.08■□□□□ 0.17
BRCA1-213ENST00000476777 USHBP1Q8N6Y0 703 aa16.08■□□□□ 0.16
BRCA1-213ENST00000476777 RTL1A6NKG5 1358 aa16.08■□□□□ 0.16
BRCA1-213ENST00000476777 HMGB2P26583 209 aaKnown RBP16.07■□□□□ 0.16
BRCA1-213ENST00000476777 RRS1Q15050 365 aaKnown RBP16.07■□□□□ 0.16
BRCA1-213ENST00000476777 AMIGO3Q86WK7 504 aa16.07■□□□□ 0.16
BRCA1-213ENST00000476777 ZNF526Q8TF50 670 aaPredicted RBP16.07■□□□□ 0.16
BRCA1-213ENST00000476777 RAPGEF4Q8WZA2 1011 aa16.07■□□□□ 0.16
BRCA1-213ENST00000476777 PALLDQ8WX93 1383 aa16.07■□□□□ 0.16
BRCA1-213ENST00000476777 TAF1LQ8IZX4 1826 aa16.07■□□□□ 0.16
BRCA1-213ENST00000476777 TESK2Q96S53 571 aa16.06■□□□□ 0.16
BRCA1-213ENST00000476777 MPRIPQ6WCQ1 1025 aa16.05■□□□□ 0.16
BRCA1-213ENST00000476777 IGSF1Q8N6C5 1336 aa16.04■□□□□ 0.16
BRCA1-213ENST00000476777 PCDH11XQ9BZA7 1347 aa16.04■□□□□ 0.16
BRCA1-213ENST00000476777 PCDH11YQ9BZA8 1340 aa16.04■□□□□ 0.16
BRCA1-213ENST00000476777 TATP17735 454 aaPredicted RBP16.04■□□□□ 0.16
BRCA1-213ENST00000476777 CYP27B1O15528 508 aa16.03■□□□□ 0.16
BRCA1-213ENST00000476777 AK7Q96M32 723 aa16.03■□□□□ 0.16
BRCA1-213ENST00000476777 WWC3Q9ULE0 1092 aa16.03■□□□□ 0.16
BRCA1-213ENST00000476777 C4BP0C0L5 1744 aa16.02■□□□□ 0.16
BRCA1-213ENST00000476777 KIF3CO14782 793 aa16.02■□□□□ 0.16
BRCA1-213ENST00000476777 FYB1O15117 783 aa16.02■□□□□ 0.16
BRCA1-213ENST00000476777 HSP90AB2PQ58FF8 381 aa16.02■□□□□ 0.16
BRCA1-213ENST00000476777 PPP4R3CPQ6ZMV5 832 aa16.02■□□□□ 0.16
BRCA1-213ENST00000476777 SMIM5Q71RC9 77 aa16.02■□□□□ 0.16
BRCA1-213ENST00000476777 SMARCC1Q92922 1105 aaPredicted RBP16.02■□□□□ 0.16
BRCA1-213ENST00000476777 TOGARAM1Q9Y4F4 1720 aa16.02■□□□□ 0.15
BRCA1-213ENST00000476777 SMG6Q86US8 1419 aaKnown RBP16.02■□□□□ 0.15
BRCA1-213ENST00000476777 UBR3Q6ZT12 1888 aa16.01■□□□□ 0.15
BRCA1-213ENST00000476777 ST20-MTHFSA0A0A6YYL1 179 aa16.01■□□□□ 0.15
BRCA1-213ENST00000476777 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.01■□□□□ 0.15
BRCA1-213ENST00000476777 PHF14O94880 888 aa16.01■□□□□ 0.15
BRCA1-213ENST00000476777 GGNBP2Q9H3C7 697 aa16.01■□□□□ 0.15
BRCA1-213ENST00000476777 PIGBQ92521 554 aa16■□□□□ 0.15
BRCA1-213ENST00000476777 ITGB4P16144 1822 aa16■□□□□ 0.15
BRCA1-213ENST00000476777 INSRP06213 1382 aa16■□□□□ 0.15
BRCA1-213ENST00000476777 SSFA2P28290 1259 aa15.98■□□□□ 0.15
BRCA1-213ENST00000476777 LINC00116Q8NCU8 138 aa15.98■□□□□ 0.15
BRCA1-213ENST00000476777 NSD3Q9BZ95 1437 aa15.98■□□□□ 0.15
BRCA1-213ENST00000476777 MAP2P11137 1827 aaKnown RBP15.97■□□□□ 0.15
BRCA1-213ENST00000476777 SLC24A1O60721 1099 aa15.97■□□□□ 0.15
BRCA1-213ENST00000476777 NKX1-1Q15270 411 aaPredicted RBP15.97■□□□□ 0.15
BRCA1-213ENST00000476777 FLT4P35916 1363 aa15.97■□□□□ 0.15
BRCA1-213ENST00000476777 PCNTO95613 3336 aa15.96■□□□□ 0.15
BRCA1-213ENST00000476777 LOC102724428A0A0B4J2F2 783 aa15.96■□□□□ 0.15
BRCA1-213ENST00000476777 SIK1P57059 783 aa15.96■□□□□ 0.15
BRCA1-213ENST00000476777 KIF24Q5T7B8 1368 aa15.96■□□□□ 0.15
BRCA1-213ENST00000476777 CICQ96RK0 1608 aaPredicted RBP15.95■□□□□ 0.14
BRCA1-213ENST00000476777 APLP1P51693 650 aa15.95■□□□□ 0.14
BRCA1-213ENST00000476777 TONSLQ96HA7 1378 aa15.95■□□□□ 0.14
BRCA1-213ENST00000476777 PKD1L3Q7Z443 1732 aa15.94■□□□□ 0.14
BRCA1-213ENST00000476777 ITPK1Q13572 414 aa15.94■□□□□ 0.14
BRCA1-213ENST00000476777 DNAJC5GQ8N7S2 189 aa15.94■□□□□ 0.14
BRCA1-213ENST00000476777 PXDNLA1KZ92 1463 aa15.93■□□□□ 0.14
BRCA1-213ENST00000476777 GNPATO15228 680 aa15.93■□□□□ 0.14
BRCA1-213ENST00000476777 MMP10P09238 476 aa15.93■□□□□ 0.14
BRCA1-213ENST00000476777 NCAPD2Q15021 1401 aa15.93■□□□□ 0.14
BRCA1-213ENST00000476777 TOMM70O94826 608 aa15.92■□□□□ 0.14
BRCA1-213ENST00000476777 ASAP1Q9ULH1 1129 aa15.92■□□□□ 0.14
BRCA1-213ENST00000476777 EMILIN1Q9Y6C2 1016 aa15.92■□□□□ 0.14
BRCA1-213ENST00000476777 HOXD11P31277 338 aaPredicted RBP15.91■□□□□ 0.14
BRCA1-213ENST00000476777 ATP6V1AP38606 617 aa15.91■□□□□ 0.14
BRCA1-213ENST00000476777 CACNB1Q02641 598 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms