RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 PPM1GO15355 546 aaPredicted RBP14.88□□□□□ -0.03
SEC13-214ENST00000476597 PDGFDQ9GZP0 370 aaPredicted RBP14.88□□□□□ -0.03
SEC13-214ENST00000476597 RGPD3A6NKT7 1758 aaPredicted RBP14.88□□□□□ -0.03
SEC13-214ENST00000476597 RGPD4Q7Z3J3 1758 aa14.88□□□□□ -0.03
SEC13-214ENST00000476597 MYOM1P52179 1685 aa14.87□□□□□ -0.03
SEC13-214ENST00000476597 LRRC4BQ9NT99 713 aa14.87□□□□□ -0.03
SEC13-214ENST00000476597 SYTL4Q96C24 671 aaPredicted RBP14.86□□□□□ -0.03
SEC13-214ENST00000476597 FAM208AQ9UK61 1670 aaKnown RBP14.86□□□□□ -0.03
SEC13-214ENST00000476597 EYA1Q99502 592 aa14.85□□□□□ -0.03
SEC13-214ENST00000476597 NHSQ6T4R5 1651 aa14.84□□□□□ -0.03
SEC13-214ENST00000476597 TNNT2P45379 298 aaPredicted RBP14.84□□□□□ -0.03
SEC13-214ENST00000476597 SLC27A3Q5K4L6 730 aa14.84□□□□□ -0.03
SEC13-214ENST00000476597 CYP27B1O15528 508 aa14.83□□□□□ -0.04
SEC13-214ENST00000476597 ZBTB7AO95365 584 aa14.83□□□□□ -0.04
SEC13-214ENST00000476597 PCDH11XQ9BZA7 1347 aa14.83□□□□□ -0.04
SEC13-214ENST00000476597 PCDH11YQ9BZA8 1340 aa14.83□□□□□ -0.04
SEC13-214ENST00000476597 NSD2O96028 1365 aa14.83□□□□□ -0.04
SEC13-214ENST00000476597 KIF20BQ96Q89 1820 aa14.82□□□□□ -0.04
SEC13-214ENST00000476597 ZNF827Q17R98 1081 aa14.82□□□□□ -0.04
SEC13-214ENST00000476597 AKT1S1Q96B36 256 aa14.82□□□□□ -0.04
SEC13-214ENST00000476597 PPP1R1BQ9UD71 204 aaPredicted RBP14.82□□□□□ -0.04
SEC13-214ENST00000476597 NCAPD2Q15021 1401 aa14.82□□□□□ -0.04
SEC13-214ENST00000476597 PTGER2P43116 358 aa14.81□□□□□ -0.04
SEC13-214ENST00000476597 EIF4A2Q14240 407 aaKnown RBP14.81□□□□□ -0.04
SEC13-214ENST00000476597 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.81□□□□□ -0.04
SEC13-214ENST00000476597 ATF5Q9Y2D1 282 aaPredicted RBP14.81□□□□□ -0.04
SEC13-214ENST00000476597 KNSTRNQ9Y448 316 aa14.81□□□□□ -0.04
SEC13-214ENST00000476597 NKX1-1Q15270 411 aaPredicted RBP14.8□□□□□ -0.04
SEC13-214ENST00000476597 MORC1Q86VD1 984 aa14.8□□□□□ -0.04
SEC13-214ENST00000476597 MTFR1LQ9H019 292 aa14.8□□□□□ -0.04
SEC13-214ENST00000476597 SPG7Q9UQ90 795 aa14.8□□□□□ -0.04
SEC13-214ENST00000476597 RGPD2P0DJD1 1756 aa14.8□□□□□ -0.04
SEC13-214ENST00000476597 KCNQ4P56696 695 aa14.79□□□□□ -0.04
SEC13-214ENST00000476597 KIF7Q2M1P5 1343 aa14.79□□□□□ -0.04
SEC13-214ENST00000476597 MPRIPQ6WCQ1 1025 aa14.78□□□□□ -0.04
SEC13-214ENST00000476597 SGIP1Q9BQI5 828 aa14.78□□□□□ -0.04
SEC13-214ENST00000476597 CCNL1Q9UK58 526 aaPredicted RBP14.78□□□□□ -0.04
SEC13-214ENST00000476597 AMER1Q5JTC6 1135 aaPredicted RBP14.77□□□□□ -0.05
SEC13-214ENST00000476597 BTAF1O14981 1849 aa14.77□□□□□ -0.05
SEC13-214ENST00000476597 PER1O15534 1290 aaPredicted RBP14.76□□□□□ -0.05
SEC13-214ENST00000476597 IFNL2Q8IZJ0 200 aa14.76□□□□□ -0.05
SEC13-214ENST00000476597 SLC16A10Q8TF71 515 aa14.76□□□□□ -0.05
SEC13-214ENST00000476597 TFCP2L1Q9NZI6 479 aa14.76□□□□□ -0.05
SEC13-214ENST00000476597 CASZ1Q86V15 1759 aa14.75□□□□□ -0.05
SEC13-214ENST00000476597 KAT6BQ8WYB5 2073 aa14.75□□□□□ -0.05
SEC13-214ENST00000476597 IGSF1Q8N6C5 1336 aa14.75□□□□□ -0.05
SEC13-214ENST00000476597 PAPPAQ13219 1627 aa14.75□□□□□ -0.05
SEC13-214ENST00000476597 PHKG2P15735 406 aa14.75□□□□□ -0.05
SEC13-214ENST00000476597 PIGBQ92521 554 aa14.75□□□□□ -0.05
SEC13-214ENST00000476597 SHANK3Q9BYB0 1731 aa14.75□□□□□ -0.05
SEC13-214ENST00000476597 PNPLA7Q6ZV29 1317 aa14.74□□□□□ -0.05
SEC13-214ENST00000476597 HMGB2P26583 209 aaKnown RBP14.74□□□□□ -0.05
SEC13-214ENST00000476597 SMARCC1Q92922 1105 aaPredicted RBP14.74□□□□□ -0.05
SEC13-214ENST00000476597 PLEKHG2Q9H7P9 1386 aa14.73□□□□□ -0.05
SEC13-214ENST00000476597 ANKRD26Q9UPS8 1709 aa14.73□□□□□ -0.05
SEC13-214ENST00000476597 PALLDQ8WX93 1383 aa14.73□□□□□ -0.05
SEC13-214ENST00000476597 MAP2P11137 1827 aaKnown RBP14.72□□□□□ -0.05
SEC13-214ENST00000476597 ARXQ96QS3 562 aa14.72□□□□□ -0.05
SEC13-214ENST00000476597 SYT17Q9BSW7 474 aa14.72□□□□□ -0.05
SEC13-214ENST00000476597 IL13P35225 146 aa14.71□□□□□ -0.05
SEC13-214ENST00000476597 PLEKHO1Q53GL0 409 aaPredicted RBP14.71□□□□□ -0.05
SEC13-214ENST00000476597 FHDC1Q9C0D6 1143 aaPredicted RBP14.71□□□□□ -0.05
SEC13-214ENST00000476597 DOT1LQ8TEK3 1739 aa14.71□□□□□ -0.05
SEC13-214ENST00000476597 DCAF8L1A6NGE4 600 aa14.7□□□□□ -0.06
SEC13-214ENST00000476597 AMOTQ4VCS5 1084 aa14.7□□□□□ -0.06
SEC13-214ENST00000476597 COL23A1Q86Y22 540 aaPredicted RBP14.7□□□□□ -0.06
SEC13-214ENST00000476597 TMOD3Q9NYL9 352 aa14.7□□□□□ -0.06
SEC13-214ENST00000476597 UTRNP46939 3433 aa14.7□□□□□ -0.06
SEC13-214ENST00000476597 MTHFSP49914 203 aa14.69□□□□□ -0.06
SEC13-214ENST00000476597 SULT6B1Q6IMI4 303 aa14.69□□□□□ -0.06
SEC13-214ENST00000476597 AEBP1Q8IUX7 1158 aa14.69□□□□□ -0.06
SEC13-214ENST00000476597 ERVV-2B6SEH9 535 aa14.68□□□□□ -0.06
SEC13-214ENST00000476597 HSP90AB1P08238 724 aaKnown RBP14.68□□□□□ -0.06
SEC13-214ENST00000476597 POLD1P28340 1107 aa14.68□□□□□ -0.06
SEC13-214ENST00000476597 CC2D1BQ5T0F9 858 aaKnown RBP14.68□□□□□ -0.06
SEC13-214ENST00000476597 DCAF5Q96JK2 942 aa14.68□□□□□ -0.06
SEC13-214ENST00000476597 ASAP1Q9ULH1 1129 aa14.68□□□□□ -0.06
SEC13-214ENST00000476597 PKD1L3Q7Z443 1732 aa14.68□□□□□ -0.06
SEC13-214ENST00000476597 LY75O60449 1722 aa14.67□□□□□ -0.06
SEC13-214ENST00000476597 LOC102724428A0A0B4J2F2 783 aa14.67□□□□□ -0.06
SEC13-214ENST00000476597 SIK1P57059 783 aa14.67□□□□□ -0.06
SEC13-214ENST00000476597 FLAD1Q8NFF5 587 aa14.67□□□□□ -0.06
SEC13-214ENST00000476597 ATG3Q9NT62 314 aa14.67□□□□□ -0.06
SEC13-214ENST00000476597 KDRP35968 1356 aa14.66□□□□□ -0.06
SEC13-214ENST00000476597 MAP3K5Q99683 1374 aa14.66□□□□□ -0.06
SEC13-214ENST00000476597 MSH5O43196 834 aa14.66□□□□□ -0.06
SEC13-214ENST00000476597 ZNF530Q6P9A1 599 aaPredicted RBP14.66□□□□□ -0.06
SEC13-214ENST00000476597 NPC1L1Q9UHC9 1359 aa14.65□□□□□ -0.06
SEC13-214ENST00000476597 ATP6V1AP38606 617 aa14.64□□□□□ -0.07
SEC13-214ENST00000476597 ITPK1Q13572 414 aa14.64□□□□□ -0.07
SEC13-214ENST00000476597 LINC00116Q8NCU8 138 aa14.64□□□□□ -0.07
SEC13-214ENST00000476597 AK7Q96M32 723 aa14.64□□□□□ -0.07
SEC13-214ENST00000476597 TOGARAM1Q9Y4F4 1720 aa14.63□□□□□ -0.07
SEC13-214ENST00000476597 DIAPH1O60610 1272 aaKnown RBP14.63□□□□□ -0.07
SEC13-214ENST00000476597 YY1P25490 414 aa14.63□□□□□ -0.07
SEC13-214ENST00000476597 CABP4P57796 275 aa14.63□□□□□ -0.07
SEC13-214ENST00000476597 C1orf141Q5JVX7 400 aa14.63□□□□□ -0.07
SEC13-214ENST00000476597 AMIGO3Q86WK7 504 aa14.63□□□□□ -0.07
SEC13-214ENST00000476597 SLC4A9Q96Q91 983 aa14.62□□□□□ -0.07
SEC13-214ENST00000476597 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms