RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 CHD1LQ86WJ1 897 aa6.12□□□□□ -1.43
CCDC39-204ENST00000476379 ZNF592Q92610 1267 aa6.12□□□□□ -1.43
CCDC39-204ENST00000476379 STK31Q9BXU1 1019 aa6.12□□□□□ -1.43
CCDC39-204ENST00000476379 TSPYL4Q9UJ04 414 aa6.12□□□□□ -1.43
CCDC39-204ENST00000476379 NPHP4O75161 1426 aaPredicted RBP6.12□□□□□ -1.43
CCDC39-204ENST00000476379 SYCE3A1L190 88 aa6.12□□□□□ -1.43
CCDC39-204ENST00000476379 GOLGA6L4A6NEF3 574 aa6.12□□□□□ -1.43
CCDC39-204ENST00000476379 HSPA1LP34931 641 aa6.12□□□□□ -1.43
CCDC39-204ENST00000476379 ACSBG1Q96GR2 724 aa6.12□□□□□ -1.43
CCDC39-204ENST00000476379 NGLY1Q96IV0 654 aa6.12□□□□□ -1.43
CCDC39-204ENST00000476379 CCDC85AQ96PX6 553 aaPredicted RBP6.12□□□□□ -1.43
CCDC39-204ENST00000476379 TBX22Q9Y458 520 aa6.12□□□□□ -1.43
CCDC39-204ENST00000476379 CAMSAP1Q5T5Y3 1602 aa6.12□□□□□ -1.43
CCDC39-204ENST00000476379 PPIP5K1Q6PFW1 1433 aa6.12□□□□□ -1.43
CCDC39-204ENST00000476379 MAGI2Q86UL8 1455 aa6.12□□□□□ -1.43
CCDC39-204ENST00000476379 HSP90B1P14625 803 aaKnown RBP6.11□□□□□ -1.43
CCDC39-204ENST00000476379 PDE3AQ14432 1141 aa6.11□□□□□ -1.43
CCDC39-204ENST00000476379 FAM43AQ8N2R8 423 aa6.11□□□□□ -1.43
CCDC39-204ENST00000476379 C19orf44Q9H6X5 657 aa6.11□□□□□ -1.43
CCDC39-204ENST00000476379 MROH2AA6NES4 1674 aa6.11□□□□□ -1.43
CCDC39-204ENST00000476379 LRPPRCP42704 1394 aaKnown RBP6.11□□□□□ -1.43
CCDC39-204ENST00000476379 PTPRTO14522 1441 aa6.11□□□□□ -1.43
CCDC39-204ENST00000476379 PKP1Q13835 747 aa6.11□□□□□ -1.43
CCDC39-204ENST00000476379 ZGPATQ8N5A5 531 aaKnown RBP6.11□□□□□ -1.43
CCDC39-204ENST00000476379 AXIN2Q9Y2T1 843 aa6.11□□□□□ -1.43
CCDC39-204ENST00000476379 PARD3Q8TEW0 1356 aa6.11□□□□□ -1.43
CCDC39-204ENST00000476379 SCAF11Q99590 1463 aaKnown RBP6.11□□□□□ -1.43
CCDC39-204ENST00000476379 PLXNC1O60486 1568 aa6.11□□□□□ -1.43
CCDC39-204ENST00000476379 BRINP3Q76B58 766 aa6.11□□□□□ -1.43
CCDC39-204ENST00000476379 TSC1Q92574 1164 aa6.11□□□□□ -1.43
CCDC39-204ENST00000476379 IGSF3O75054 1194 aa6.11□□□□□ -1.43
CCDC39-204ENST00000476379 CD2BP2O95400 341 aaKnown RBP6.11□□□□□ -1.43
CCDC39-204ENST00000476379 CREBRFQ8IUR6 639 aa6.11□□□□□ -1.43
CCDC39-204ENST00000476379 A0A0U1RQG5 324 aaPredicted RBP6.1□□□□□ -1.43
CCDC39-204ENST00000476379 TBC1D9Q6ZT07 1266 aa6.1□□□□□ -1.43
CCDC39-204ENST00000476379 KIAA1211Q6ZU35 1233 aa6.1□□□□□ -1.43
CCDC39-204ENST00000476379 TOM1L2Q6ZVM7 507 aa6.1□□□□□ -1.43
CCDC39-204ENST00000476379 C8orf58Q8NAV2 365 aa6.1□□□□□ -1.43
CCDC39-204ENST00000476379 ADAMTS13Q76LX8 1427 aa6.1□□□□□ -1.43
CCDC39-204ENST00000476379 DDX11L8A8MPP1 907 aa6.1□□□□□ -1.43
CCDC39-204ENST00000476379 CPA1P15085 419 aa6.1□□□□□ -1.43
CCDC39-204ENST00000476379 ST18O60284 1047 aa6.1□□□□□ -1.43
CCDC39-204ENST00000476379 SURF6O75683 361 aaKnown RBP6.1□□□□□ -1.43
CCDC39-204ENST00000476379 GAS2L2Q8NHY3 880 aa6.1□□□□□ -1.43
CCDC39-204ENST00000476379 CFAP74Q9C0B2 1584 aa6.1□□□□□ -1.43
CCDC39-204ENST00000476379 RPGRIP1LQ68CZ1 1315 aa6.09□□□□□ -1.43
CCDC39-204ENST00000476379 C17orf53Q8N3J3 647 aaPredicted RBP6.09□□□□□ -1.43
CCDC39-204ENST00000476379 TBC1D32Q96NH3 1257 aa6.09□□□□□ -1.43
CCDC39-204ENST00000476379 RSPH6AQ9H0K4 717 aa6.09□□□□□ -1.43
CCDC39-204ENST00000476379 NKTRP30414 1462 aaKnown RBP6.09□□□□□ -1.43
CCDC39-204ENST00000476379 PIK3C2GO75747 1445 aa6.09□□□□□ -1.43
CCDC39-204ENST00000476379 FER1L4A9Z1Z3 1794 aa6.09□□□□□ -1.43
CCDC39-204ENST00000476379 KDM2BQ8NHM5 1336 aa6.09□□□□□ -1.43
CCDC39-204ENST00000476379 ESPNB1AK53 854 aa6.09□□□□□ -1.43
CCDC39-204ENST00000476379 MPRIPQ6WCQ1 1025 aa6.09□□□□□ -1.43
CCDC39-204ENST00000476379 MEIS3Q99687 375 aa6.09□□□□□ -1.43
CCDC39-204ENST00000476379 BTG4Q9NY30 223 aa6.09□□□□□ -1.43
CCDC39-204ENST00000476379 TTC21BQ7Z4L5 1316 aa6.09□□□□□ -1.43
CCDC39-204ENST00000476379 MSH6P52701 1360 aa6.09□□□□□ -1.43
CCDC39-204ENST00000476379 TRPM2O94759 1503 aa6.09□□□□□ -1.44
CCDC39-204ENST00000476379 PTCD1O75127 700 aaKnown RBP6.09□□□□□ -1.44
CCDC39-204ENST00000476379 CAMK4Q16566 473 aa6.09□□□□□ -1.44
CCDC39-204ENST00000476379 CWC27Q6UX04 472 aaKnown RBP6.09□□□□□ -1.44
CCDC39-204ENST00000476379 IQGAP3Q86VI3 1631 aa6.09□□□□□ -1.44
CCDC39-204ENST00000476379 MAP3K19Q56UN5 1328 aa6.08□□□□□ -1.44
CCDC39-204ENST00000476379 GCP02774 474 aa6.08□□□□□ -1.44
CCDC39-204ENST00000476379 RAB11FIP4Q86YS3 637 aa6.08□□□□□ -1.44
CCDC39-204ENST00000476379 FMNL2Q96PY5 1086 aa6.08□□□□□ -1.44
CCDC39-204ENST00000476379 MBIPQ9NS73 344 aa6.08□□□□□ -1.44
CCDC39-204ENST00000476379 POLKQ9UBT6 870 aa6.08□□□□□ -1.44
CCDC39-204ENST00000476379 SPG7Q9UQ90 795 aa6.08□□□□□ -1.44
CCDC39-204ENST00000476379 CDC45O75419 566 aa6.08□□□□□ -1.44
CCDC39-204ENST00000476379 SLC39A6Q13433 755 aa6.08□□□□□ -1.44
CCDC39-204ENST00000476379 FAM98CQ17RN3 349 aaKnown RBP6.08□□□□□ -1.44
CCDC39-204ENST00000476379 CADPS2Q86UW7 1296 aa6.08□□□□□ -1.44
CCDC39-204ENST00000476379 BCORL1Q5H9F3 1711 aa6.08□□□□□ -1.44
CCDC39-204ENST00000476379 RNF123Q5XPI4 1314 aa6.08□□□□□ -1.44
CCDC39-204ENST00000476379 K7ELQ4 463 aaPredicted RBP6.07□□□□□ -1.44
CCDC39-204ENST00000476379 KIF16BQ96L93 1317 aa6.07□□□□□ -1.44
CCDC39-204ENST00000476379 MCCP23508 829 aa6.07□□□□□ -1.44
CCDC39-204ENST00000476379 MRE11P49959 708 aa6.07□□□□□ -1.44
CCDC39-204ENST00000476379 LARP1Q6PKG0 1096 aaKnown RBP6.07□□□□□ -1.44
CCDC39-204ENST00000476379 UNC13BO14795 1591 aa6.07□□□□□ -1.44
CCDC39-204ENST00000476379 TET3O43151 1660 aa6.07□□□□□ -1.44
CCDC39-204ENST00000476379 C3P01024 1663 aa6.07□□□□□ -1.44
CCDC39-204ENST00000476379 SPHKAPQ2M3C7 1700 aa6.07□□□□□ -1.44
CCDC39-204ENST00000476379 MYL6BP14649 208 aa6.07□□□□□ -1.44
CCDC39-204ENST00000476379 GAS2L3Q86XJ1 694 aa6.07□□□□□ -1.44
CCDC39-204ENST00000476379 C9orf78Q9NZ63 289 aaPredicted RBP6.07□□□□□ -1.44
CCDC39-204ENST00000476379 PREX1Q8TCU6 1659 aa6.07□□□□□ -1.44
CCDC39-204ENST00000476379 PODXL2Q9NZ53 605 aa6.06□□□□□ -1.44
CCDC39-204ENST00000476379 NDUFB9Q9Y6M9 179 aa6.06□□□□□ -1.44
CCDC39-204ENST00000476379 RALGAPBQ86X10 1494 aa6.06□□□□□ -1.44
CCDC39-204ENST00000476379 ALKQ9UM73 1620 aa6.06□□□□□ -1.44
CCDC39-204ENST00000476379 GNAI1P63096 354 aa6.06□□□□□ -1.44
CCDC39-204ENST00000476379 G2E3Q7L622 706 aa6.06□□□□□ -1.44
CCDC39-204ENST00000476379 ZMYM4Q5VZL5 1548 aa6.06□□□□□ -1.44
CCDC39-204ENST00000476379 TOM1O60784 492 aa6.06□□□□□ -1.44
CCDC39-204ENST00000476379 FAM173BQ6P4H8 233 aa6.06□□□□□ -1.44
CCDC39-204ENST00000476379 PTF1AQ7RTS3 328 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms