RNA–Protein interactions for RNA: ENST00000476173.5

TMEM254-211, Transcript of transmembrane protein 254, humanhuman

TSL 4

Gene TMEM254, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-211ENST00000476173 ZNF772Q68DY9 489 aaPredicted RBP13.07□□□□□ -0.32
TMEM254-211ENST00000476173 AEBP1Q8IUX7 1158 aa13.07□□□□□ -0.32
TMEM254-211ENST00000476173 USHBP1Q8N6Y0 703 aa13.07□□□□□ -0.32
TMEM254-211ENST00000476173 TRPC5Q9UL62 973 aaPredicted RBP13.07□□□□□ -0.32
TMEM254-211ENST00000476173 HMOX1P09601 288 aa13.06□□□□□ -0.32
TMEM254-211ENST00000476173 SULT6B1Q6IMI4 303 aa13.06□□□□□ -0.32
TMEM254-211ENST00000476173 TCP11L2Q8N4U5 519 aa13.06□□□□□ -0.32
TMEM254-211ENST00000476173 QTRT2Q9H974 415 aaKnown RBP13.06□□□□□ -0.32
TMEM254-211ENST00000476173 USP35Q9P2H5 1018 aa13.06□□□□□ -0.32
TMEM254-211ENST00000476173 ADAMTS8Q9UP79 889 aa13.06□□□□□ -0.32
TMEM254-211ENST00000476173 CCDC9Q9Y3X0 531 aaKnown RBP13.06□□□□□ -0.32
TMEM254-211ENST00000476173 KDRP35968 1356 aa13.06□□□□□ -0.32
TMEM254-211ENST00000476173 WDR43Q15061 677 aaKnown RBP eCLIP13.05□□□□□ -0.32
TMEM254-211ENST00000476173 GJD4Q96KN9 370 aaPredicted RBP13.05□□□□□ -0.32
TMEM254-211ENST00000476173 FCHSD2O94868 740 aa13.04□□□□□ -0.32
TMEM254-211ENST00000476173 RSPH6AQ9H0K4 717 aa13.04□□□□□ -0.32
TMEM254-211ENST00000476173 THRAP3Q9Y2W1 955 aaKnown RBP13.04□□□□□ -0.32
TMEM254-211ENST00000476173 SPDYE4A6NLX3 237 aa13.03□□□□□ -0.32
TMEM254-211ENST00000476173 BARGINQ6ZT62 677 aa13.03□□□□□ -0.32
TMEM254-211ENST00000476173 GLI3P10071 1580 aa13.03□□□□□ -0.32
TMEM254-211ENST00000476173 PRKAR2BP31323 418 aa13.02□□□□□ -0.33
TMEM254-211ENST00000476173 FAM9BQ8IZU0 186 aa13.02□□□□□ -0.33
TMEM254-211ENST00000476173 ONECUT3O60422 494 aaPredicted RBP13.01□□□□□ -0.33
TMEM254-211ENST00000476173 IL2RBP14784 551 aa13.01□□□□□ -0.33
TMEM254-211ENST00000476173 POTEAQ6S8J7 498 aa13.01□□□□□ -0.33
TMEM254-211ENST00000476173 RAPGEF4Q8WZA2 1011 aa13.01□□□□□ -0.33
TMEM254-211ENST00000476173 PLEKHF1Q96S99 279 aa13.01□□□□□ -0.33
TMEM254-211ENST00000476173 DISP2A7MBM2 1401 aa13.01□□□□□ -0.33
TMEM254-211ENST00000476173 MEGF6O75095 1541 aa13.01□□□□□ -0.33
TMEM254-211ENST00000476173 RBM6P78332 1123 aaKnown RBP13□□□□□ -0.33
TMEM254-211ENST00000476173 FAM98CQ17RN3 349 aaKnown RBP13□□□□□ -0.33
TMEM254-211ENST00000476173 CDCA7Q9BWT1 371 aaPredicted RBP13□□□□□ -0.33
TMEM254-211ENST00000476173 TATP17735 454 aaPredicted RBP12.99□□□□□ -0.33
TMEM254-211ENST00000476173 CCDC146Q8IYE0 955 aa12.99□□□□□ -0.33
TMEM254-211ENST00000476173 PHACTR3Q96KR7 559 aa12.99□□□□□ -0.33
TMEM254-211ENST00000476173 PNNQ9H307 717 aaKnown RBP12.99□□□□□ -0.33
TMEM254-211ENST00000476173 WNK3Q9BYP7 1800 aa12.99□□□□□ -0.33
TMEM254-211ENST00000476173 OVOS2A0A0G2JMS6 1433 aa12.98□□□□□ -0.33
TMEM254-211ENST00000476173 PLEKHG2Q9H7P9 1386 aa12.98□□□□□ -0.33
TMEM254-211ENST00000476173 RXRBP28702 533 aa12.98□□□□□ -0.33
TMEM254-211ENST00000476173 RUNDC1Q96C34 613 aa12.98□□□□□ -0.33
TMEM254-211ENST00000476173 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.98□□□□□ -0.33
TMEM254-211ENST00000476173 PARP4Q9UKK3 1724 aaKnown RBP12.97□□□□□ -0.33
TMEM254-211ENST00000476173 THSD7AQ9UPZ6 1657 aa12.97□□□□□ -0.33
TMEM254-211ENST00000476173 PLEKHO1Q53GL0 409 aaPredicted RBP12.97□□□□□ -0.33
TMEM254-211ENST00000476173 ZCRB1Q8TBF4 217 aaKnown RBP12.97□□□□□ -0.33
TMEM254-211ENST00000476173 MTHFSDQ2M296 383 aaKnown RBP12.96□□□□□ -0.33
TMEM254-211ENST00000476173 AMOTQ4VCS5 1084 aa12.96□□□□□ -0.33
TMEM254-211ENST00000476173 SPG7Q9UQ90 795 aa12.96□□□□□ -0.33
TMEM254-211ENST00000476173 MAPK8IP3Q9UPT6 1336 aa12.95□□□□□ -0.34
TMEM254-211ENST00000476173 EXOC5O00471 708 aa12.95□□□□□ -0.34
TMEM254-211ENST00000476173 NEFMP07197 916 aa12.95□□□□□ -0.34
TMEM254-211ENST00000476173 DDB1Q16531 1140 aa12.95□□□□□ -0.34
TMEM254-211ENST00000476173 SEPT12Q8IYM1 358 aa12.95□□□□□ -0.34
TMEM254-211ENST00000476173 PKD1L3Q7Z443 1732 aa12.95□□□□□ -0.34
TMEM254-211ENST00000476173 A0A0G2JS52 829 aa12.94□□□□□ -0.34
TMEM254-211ENST00000476173 APAF1O14727 1248 aa12.94□□□□□ -0.34
TMEM254-211ENST00000476173 MYT1Q01538 1121 aa12.94□□□□□ -0.34
TMEM254-211ENST00000476173 LRRC37A3O60309 1634 aa12.94□□□□□ -0.34
TMEM254-211ENST00000476173 TNS2Q63HR2 1409 aa12.94□□□□□ -0.34
TMEM254-211ENST00000476173 SHANK3Q9BYB0 1731 aa12.93□□□□□ -0.34
TMEM254-211ENST00000476173 CYP27B1O15528 508 aa12.93□□□□□ -0.34
TMEM254-211ENST00000476173 TMPOP42166 694 aaKnown RBP12.93□□□□□ -0.34
TMEM254-211ENST00000476173 ZNF530Q6P9A1 599 aaPredicted RBP12.93□□□□□ -0.34
TMEM254-211ENST00000476173 GAS2L2Q8NHY3 880 aa12.93□□□□□ -0.34
TMEM254-211ENST00000476173 PCDH11XQ9BZA7 1347 aa12.92□□□□□ -0.34
TMEM254-211ENST00000476173 PCDH11YQ9BZA8 1340 aa12.92□□□□□ -0.34
TMEM254-211ENST00000476173 PHKG2P15735 406 aa12.92□□□□□ -0.34
TMEM254-211ENST00000476173 NFE2L2Q16236 605 aa12.92□□□□□ -0.34
TMEM254-211ENST00000476173 DDX54Q8TDD1 881 aaKnown RBP12.92□□□□□ -0.34
TMEM254-211ENST00000476173 RGS12O14924 1447 aa12.91□□□□□ -0.34
TMEM254-211ENST00000476173 PDE3BQ13370 1112 aa12.91□□□□□ -0.34
TMEM254-211ENST00000476173 AKAP4Q5JQC9 854 aa12.91□□□□□ -0.34
TMEM254-211ENST00000476173 IFNL2Q8IZJ0 200 aa12.91□□□□□ -0.34
TMEM254-211ENST00000476173 MARCH10Q8NA82 808 aaPredicted RBP12.91□□□□□ -0.34
TMEM254-211ENST00000476173 RRP7AQ9Y3A4 280 aaKnown RBP12.91□□□□□ -0.34
TMEM254-211ENST00000476173 BRWD3Q6RI45 1802 aa12.9□□□□□ -0.34
TMEM254-211ENST00000476173 SENP3-EIF4A1A0A087X0R7 540 aa12.9□□□□□ -0.34
TMEM254-211ENST00000476173 RIPK4P57078 832 aa12.9□□□□□ -0.34
TMEM254-211ENST00000476173 NKX1-1Q15270 411 aaPredicted RBP12.9□□□□□ -0.34
TMEM254-211ENST00000476173 NEUROD2Q15784 382 aa12.9□□□□□ -0.34
TMEM254-211ENST00000476173 C1orf141Q5JVX7 400 aa12.9□□□□□ -0.34
TMEM254-211ENST00000476173 DLG5Q8TDM6 1919 aa12.9□□□□□ -0.35
TMEM254-211ENST00000476173 GNAT3A8MTJ3 354 aa12.89□□□□□ -0.35
TMEM254-211ENST00000476173 MAP3K5Q99683 1374 aa12.89□□□□□ -0.35
TMEM254-211ENST00000476173 HTATSF1O43719 755 aaKnown RBP12.88□□□□□ -0.35
TMEM254-211ENST00000476173 HSP90AB1P08238 724 aaKnown RBP12.88□□□□□ -0.35
TMEM254-211ENST00000476173 MPRIPQ6WCQ1 1025 aa12.88□□□□□ -0.35
TMEM254-211ENST00000476173 KRT27Q7Z3Y8 459 aa12.88□□□□□ -0.35
TMEM254-211ENST00000476173 LGR6Q9HBX8 967 aa12.88□□□□□ -0.35
TMEM254-211ENST00000476173 TRIM35Q9UPQ4 493 aa12.88□□□□□ -0.35
TMEM254-211ENST00000476173 FAM182BQ5T319 152 aa12.87□□□□□ -0.35
TMEM254-211ENST00000476173 IL17REQ8NFR9 667 aa12.87□□□□□ -0.35
TMEM254-211ENST00000476173 DCAF5Q96JK2 942 aa12.87□□□□□ -0.35
TMEM254-211ENST00000476173 KDM6AO15550 1401 aaPredicted RBP12.87□□□□□ -0.35
TMEM254-211ENST00000476173 RNMTO43148 476 aaKnown RBP12.86□□□□□ -0.35
TMEM254-211ENST00000476173 LMOD3Q0VAK6 560 aa12.86□□□□□ -0.35
TMEM254-211ENST00000476173 DCTN1Q14203 1278 aa12.86□□□□□ -0.35
TMEM254-211ENST00000476173 CCDC27Q2M243 656 aa12.86□□□□□ -0.35
TMEM254-211ENST00000476173 MCM10Q7L590 875 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms