RNA–Protein interactions for RNA: ENST00000476098.5

BEST3-204, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 1,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-204ENST00000476098 VPS72Q15906 364 aa15.3■□□□□ 0.04
BEST3-204ENST00000476098 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.3■□□□□ 0.04
BEST3-204ENST00000476098 FAM208AQ9UK61 1670 aaKnown RBP15.3■□□□□ 0.04
BEST3-204ENST00000476098 AFF2P51816 1311 aa15.29■□□□□ 0.04
BEST3-204ENST00000476098 MEGF6O75095 1541 aa15.29■□□□□ 0.04
BEST3-204ENST00000476098 IL2RBP14784 551 aa15.29■□□□□ 0.04
BEST3-204ENST00000476098 PLEKHG2Q9H7P9 1386 aa15.29■□□□□ 0.04
BEST3-204ENST00000476098 PLCH1Q4KWH8 1693 aa15.29■□□□□ 0.04
BEST3-204ENST00000476098 THRAP3Q9Y2W1 955 aaKnown RBP15.28■□□□□ 0.04
BEST3-204ENST00000476098 LMOD3Q0VAK6 560 aa15.27■□□□□ 0.03
BEST3-204ENST00000476098 PDE3BQ13370 1112 aa15.27■□□□□ 0.03
BEST3-204ENST00000476098 ZNF530Q6P9A1 599 aaPredicted RBP15.27■□□□□ 0.03
BEST3-204ENST00000476098 NRAPQ86VF7 1730 aa15.27■□□□□ 0.03
BEST3-204ENST00000476098 WDR63Q8IWG1 891 aa15.27■□□□□ 0.03
BEST3-204ENST00000476098 CDCA7LQ96GN5 454 aa15.27■□□□□ 0.03
BEST3-204ENST00000476098 SPG7Q9UQ90 795 aa15.27■□□□□ 0.03
BEST3-204ENST00000476098 CCDC9Q9Y3X0 531 aaKnown RBP15.27■□□□□ 0.03
BEST3-204ENST00000476098 NWD2Q9ULI1 1742 aa15.26■□□□□ 0.03
BEST3-204ENST00000476098 OVOS2A0A0G2JMS6 1433 aa15.26■□□□□ 0.03
BEST3-204ENST00000476098 GNAT3A8MTJ3 354 aa15.26■□□□□ 0.03
BEST3-204ENST00000476098 HTATSF1O43719 755 aaKnown RBP15.26■□□□□ 0.03
BEST3-204ENST00000476098 GOLGA2Q08379 1002 aa15.26■□□□□ 0.03
BEST3-204ENST00000476098 DCTN1Q14203 1278 aa15.26■□□□□ 0.03
BEST3-204ENST00000476098 ZCRB1Q8TBF4 217 aaKnown RBP15.26■□□□□ 0.03
BEST3-204ENST00000476098 DISP2A7MBM2 1401 aa15.26■□□□□ 0.03
BEST3-204ENST00000476098 AKAP4Q5JQC9 854 aa15.25■□□□□ 0.03
BEST3-204ENST00000476098 BARGINQ6ZT62 677 aa15.25■□□□□ 0.03
BEST3-204ENST00000476098 THUMPD2Q9BTF0 503 aaKnown RBP15.25■□□□□ 0.03
BEST3-204ENST00000476098 SPINK5Q9NQ38 1064 aaPredicted RBP15.25■□□□□ 0.03
BEST3-204ENST00000476098 MCM10Q7L590 875 aa15.25■□□□□ 0.03
BEST3-204ENST00000476098 CYP27B1O15528 508 aa15.24■□□□□ 0.03
BEST3-204ENST00000476098 C1orf141Q5JVX7 400 aa15.24■□□□□ 0.03
BEST3-204ENST00000476098 IL17REQ8NFR9 667 aa15.24■□□□□ 0.03
BEST3-204ENST00000476098 RTF1Q92541 710 aaKnown RBP15.24■□□□□ 0.03
BEST3-204ENST00000476098 CDCA7Q9BWT1 371 aaPredicted RBP15.24■□□□□ 0.03
BEST3-204ENST00000476098 MAP3K5Q99683 1374 aa15.24■□□□□ 0.03
BEST3-204ENST00000476098 PHKG2P15735 406 aa15.23■□□□□ 0.03
BEST3-204ENST00000476098 SLFN5Q08AF3 891 aa15.23■□□□□ 0.03
BEST3-204ENST00000476098 TRPC5Q9UL62 973 aaPredicted RBP15.23■□□□□ 0.03
BEST3-204ENST00000476098 TRMT2AQ8IZ69 625 aaKnown RBP15.22■□□□□ 0.03
BEST3-204ENST00000476098 IFNL2Q8IZJ0 200 aa15.22■□□□□ 0.03
BEST3-204ENST00000476098 GJD4Q96KN9 370 aaPredicted RBP15.22■□□□□ 0.03
BEST3-204ENST00000476098 IL16Q14005 1332 aa15.22■□□□□ 0.03
BEST3-204ENST00000476098 E9PSI1 815 aa15.22■□□□□ 0.03
BEST3-204ENST00000476098 CENPBP07199 599 aaPredicted RBP15.22■□□□□ 0.03
BEST3-204ENST00000476098 FAM98CQ17RN3 349 aaKnown RBP15.22■□□□□ 0.03
BEST3-204ENST00000476098 MPRIPQ6WCQ1 1025 aa15.22■□□□□ 0.03
BEST3-204ENST00000476098 QTRT2Q9H974 415 aaKnown RBP15.22■□□□□ 0.03
BEST3-204ENST00000476098 LGR6Q9HBX8 967 aa15.22■□□□□ 0.03
BEST3-204ENST00000476098 ATRNO75882 1429 aa15.22■□□□□ 0.03
BEST3-204ENST00000476098 EXOC5O00471 708 aa15.21■□□□□ 0.03
BEST3-204ENST00000476098 CALD1Q05682 793 aaKnown RBP15.21■□□□□ 0.03
BEST3-204ENST00000476098 PCDH11XQ9BZA7 1347 aa15.21■□□□□ 0.02
BEST3-204ENST00000476098 PCDH11YQ9BZA8 1340 aa15.21■□□□□ 0.02
BEST3-204ENST00000476098 DUSP27Q5VZP5 1158 aa15.2■□□□□ 0.02
BEST3-204ENST00000476098 DDX54Q8TDD1 881 aaKnown RBP15.2■□□□□ 0.02
BEST3-204ENST00000476098 CEMIPQ8WUJ3 1361 aa15.2■□□□□ 0.02
BEST3-204ENST00000476098 RNMTO43148 476 aaKnown RBP15.19■□□□□ 0.02
BEST3-204ENST00000476098 ZNF853P0CG23 659 aa15.19■□□□□ 0.02
BEST3-204ENST00000476098 ONECUT3O60422 494 aaPredicted RBP15.19■□□□□ 0.02
BEST3-204ENST00000476098 NKX1-1Q15270 411 aaPredicted RBP15.19■□□□□ 0.02
BEST3-204ENST00000476098 DDB1Q16531 1140 aa15.19■□□□□ 0.02
BEST3-204ENST00000476098 ZNF772Q68DY9 489 aaPredicted RBP15.19■□□□□ 0.02
BEST3-204ENST00000476098 CFAP44Q96MT7 982 aa15.19■□□□□ 0.02
BEST3-204ENST00000476098 IFT57Q9NWB7 429 aa15.19■□□□□ 0.02
BEST3-204ENST00000476098 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.18■□□□□ 0.02
BEST3-204ENST00000476098 HSP90AB1P08238 724 aaKnown RBP15.18■□□□□ 0.02
BEST3-204ENST00000476098 DCAF5Q96JK2 942 aa15.18■□□□□ 0.02
BEST3-204ENST00000476098 GNAI1P63096 354 aa15.17■□□□□ 0.02
BEST3-204ENST00000476098 ILDR1Q86SU0 546 aaPredicted RBP15.17■□□□□ 0.02
BEST3-204ENST00000476098 MYH16Q9H6N6 1097 aa15.17■□□□□ 0.02
BEST3-204ENST00000476098 LAS1LQ9Y4W2 734 aaKnown RBP15.17■□□□□ 0.02
BEST3-204ENST00000476098 CHL1O00533 1208 aa15.16■□□□□ 0.02
BEST3-204ENST00000476098 TSR2Q969E8 191 aaKnown RBP15.16■□□□□ 0.02
BEST3-204ENST00000476098 PKD1L3Q7Z443 1732 aa15.16■□□□□ 0.02
BEST3-204ENST00000476098 PARP4Q9UKK3 1724 aaKnown RBP15.16■□□□□ 0.02
BEST3-204ENST00000476098 KDM6AO15550 1401 aaPredicted RBP15.16■□□□□ 0.02
BEST3-204ENST00000476098 TNS2Q63HR2 1409 aa15.16■□□□□ 0.02
BEST3-204ENST00000476098 TAF7Q15545 349 aaPredicted RBP15.16■□□□□ 0.02
BEST3-204ENST00000476098 RGS17Q9UGC6 210 aaPredicted RBP15.16■□□□□ 0.02
BEST3-204ENST00000476098 DLG5Q8TDM6 1919 aa15.15■□□□□ 0.02
BEST3-204ENST00000476098 MARCH10Q8NA82 808 aaPredicted RBP15.15■□□□□ 0.02
BEST3-204ENST00000476098 MBIPQ9NS73 344 aa15.15■□□□□ 0.02
BEST3-204ENST00000476098 MIS18AQ9NYP9 233 aa15.15■□□□□ 0.02
BEST3-204ENST00000476098 FANCIQ9NVI1 1328 aa15.15■□□□□ 0.02
BEST3-204ENST00000476098 GLI3P10071 1580 aa15.15■□□□□ 0.02
BEST3-204ENST00000476098 TEFQ10587 303 aa15.14■□□□□ 0.01
BEST3-204ENST00000476098 SLC52A2Q9HAB3 445 aa15.13■□□□□ 0.01
BEST3-204ENST00000476098 BABAM1Q9NWV8 329 aa15.13■□□□□ 0.01
BEST3-204ENST00000476098 A0A0G2JS52 829 aa15.12■□□□□ 0.01
BEST3-204ENST00000476098 ERVV-2B6SEH9 535 aa15.12■□□□□ 0.01
BEST3-204ENST00000476098 RBM6P78332 1123 aaKnown RBP15.12■□□□□ 0.01
BEST3-204ENST00000476098 MYT1Q01538 1121 aa15.12■□□□□ 0.01
BEST3-204ENST00000476098 SEPT12Q8IYM1 358 aa15.12■□□□□ 0.01
BEST3-204ENST00000476098 NFATC2IPQ8NCF5 419 aa15.12■□□□□ 0.01
BEST3-204ENST00000476098 TSPYL4Q9UJ04 414 aa15.12■□□□□ 0.01
BEST3-204ENST00000476098 CABP4P57796 275 aa15.11■□□□□ 0.01
BEST3-204ENST00000476098 BTBD11A6QL63 1104 aa15.1■□□□□ 0.01
BEST3-204ENST00000476098 EXOSC9Q06265 439 aaKnown RBP15.1■□□□□ 0.01
BEST3-204ENST00000476098 SHANK3Q9BYB0 1731 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms