RNA–Protein interactions for RNA: ENST00000475996.1

HLA-F-224, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-224ENST00000475996 PARP4Q9UKK3 1724 aaKnown RBP16.92■□□□□ 0.3
HLA-F-224ENST00000475996 HNRNPUQ00839 825 aaKnown RBP eCLIP16.91■□□□□ 0.3
HLA-F-224ENST00000475996 NEUROD2Q15784 382 aa16.91■□□□□ 0.3
HLA-F-224ENST00000475996 FAM98CQ17RN3 349 aaKnown RBP16.91■□□□□ 0.3
HLA-F-224ENST00000475996 ZNF772Q68DY9 489 aaPredicted RBP16.91■□□□□ 0.3
HLA-F-224ENST00000475996 GJD4Q96KN9 370 aaPredicted RBP16.91■□□□□ 0.3
HLA-F-224ENST00000475996 THRAP3Q9Y2W1 955 aaKnown RBP16.91■□□□□ 0.3
HLA-F-224ENST00000475996 GLI3P10071 1580 aa16.91■□□□□ 0.3
HLA-F-224ENST00000475996 DISP2A7MBM2 1401 aa16.91■□□□□ 0.3
HLA-F-224ENST00000475996 MTHFSDQ2M296 383 aaKnown RBP16.91■□□□□ 0.3
HLA-F-224ENST00000475996 OVOS2A0A0G2JMS6 1433 aa16.9■□□□□ 0.3
HLA-F-224ENST00000475996 TMPOP42166 694 aaKnown RBP16.9■□□□□ 0.3
HLA-F-224ENST00000475996 NFE2L2Q16236 605 aa16.9■□□□□ 0.3
HLA-F-224ENST00000475996 PLEKHO1Q53GL0 409 aaPredicted RBP16.9■□□□□ 0.3
HLA-F-224ENST00000475996 DLG5Q8TDM6 1919 aa16.89■□□□□ 0.29
HLA-F-224ENST00000475996 BARGINQ6ZT62 677 aa16.89■□□□□ 0.29
HLA-F-224ENST00000475996 A0A0G2JS52 829 aa16.88■□□□□ 0.29
HLA-F-224ENST00000475996 MYT1Q01538 1121 aa16.88■□□□□ 0.29
HLA-F-224ENST00000475996 AMOTQ4VCS5 1084 aa16.88■□□□□ 0.29
HLA-F-224ENST00000475996 ZNF530Q6P9A1 599 aaPredicted RBP16.88■□□□□ 0.29
HLA-F-224ENST00000475996 GAS2L2Q8NHY3 880 aa16.88■□□□□ 0.29
HLA-F-224ENST00000475996 RGS17Q9UGC6 210 aaPredicted RBP16.88■□□□□ 0.29
HLA-F-224ENST00000475996 PKD1L3Q7Z443 1732 aa16.88■□□□□ 0.29
HLA-F-224ENST00000475996 RIPK4P57078 832 aa16.87■□□□□ 0.29
HLA-F-224ENST00000475996 ZCRB1Q8TBF4 217 aaKnown RBP16.87■□□□□ 0.29
HLA-F-224ENST00000475996 SPG7Q9UQ90 795 aa16.87■□□□□ 0.29
HLA-F-224ENST00000475996 CDCA7Q9BWT1 371 aaPredicted RBP16.86■□□□□ 0.29
HLA-F-224ENST00000475996 SHANK3Q9BYB0 1731 aa16.85■□□□□ 0.29
HLA-F-224ENST00000475996 EXOC5O00471 708 aa16.85■□□□□ 0.29
HLA-F-224ENST00000475996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.85■□□□□ 0.29
HLA-F-224ENST00000475996 LRRC37A3O60309 1634 aa16.84■□□□□ 0.29
HLA-F-224ENST00000475996 TNS2Q63HR2 1409 aa16.84■□□□□ 0.29
HLA-F-224ENST00000475996 PLEKHG2Q9H7P9 1386 aa16.84■□□□□ 0.29
HLA-F-224ENST00000475996 DDB1Q16531 1140 aa16.84■□□□□ 0.29
HLA-F-224ENST00000475996 C1orf141Q5JVX7 400 aa16.84■□□□□ 0.29
HLA-F-224ENST00000475996 POTEAQ6S8J7 498 aa16.84■□□□□ 0.29
HLA-F-224ENST00000475996 DDX54Q8TDD1 881 aaKnown RBP16.84■□□□□ 0.29
HLA-F-224ENST00000475996 THSD7AQ9UPZ6 1657 aa16.83■□□□□ 0.29
HLA-F-224ENST00000475996 MAP3K5Q99683 1374 aa16.83■□□□□ 0.28
HLA-F-224ENST00000475996 PCDH11XQ9BZA7 1347 aa16.83■□□□□ 0.28
HLA-F-224ENST00000475996 PCDH11YQ9BZA8 1340 aa16.83■□□□□ 0.28
HLA-F-224ENST00000475996 CYP27B1O15528 508 aa16.83■□□□□ 0.28
HLA-F-224ENST00000475996 RBM6P78332 1123 aaKnown RBP16.83■□□□□ 0.28
HLA-F-224ENST00000475996 DCTN1Q14203 1278 aa16.83■□□□□ 0.28
HLA-F-224ENST00000475996 AKAP4Q5JQC9 854 aa16.83■□□□□ 0.28
HLA-F-224ENST00000475996 TRIM35Q9UPQ4 493 aa16.83■□□□□ 0.28
HLA-F-224ENST00000475996 GNAT3A8MTJ3 354 aa16.82■□□□□ 0.28
HLA-F-224ENST00000475996 PHKG2P15735 406 aa16.82■□□□□ 0.28
HLA-F-224ENST00000475996 IFNL2Q8IZJ0 200 aa16.82■□□□□ 0.28
HLA-F-224ENST00000475996 SEPT12Q8IYM1 358 aa16.81■□□□□ 0.28
HLA-F-224ENST00000475996 RXRBP28702 533 aa16.8■□□□□ 0.28
HLA-F-224ENST00000475996 MPRIPQ6WCQ1 1025 aa16.8■□□□□ 0.28
HLA-F-224ENST00000475996 MCM10Q7L590 875 aa16.8■□□□□ 0.28
HLA-F-224ENST00000475996 RTF1Q92541 710 aaKnown RBP16.8■□□□□ 0.28
HLA-F-224ENST00000475996 THUMPD2Q9BTF0 503 aaKnown RBP16.8■□□□□ 0.28
HLA-F-224ENST00000475996 VIRMAQ69YN4 1812 aaKnown RBP16.8■□□□□ 0.28
HLA-F-224ENST00000475996 KAT6BQ8WYB5 2073 aa16.8■□□□□ 0.28
HLA-F-224ENST00000475996 ONECUT3O60422 494 aaPredicted RBP16.8■□□□□ 0.28
HLA-F-224ENST00000475996 LMOD3Q0VAK6 560 aa16.8■□□□□ 0.28
HLA-F-224ENST00000475996 WWC1Q8IX03 1113 aa16.8■□□□□ 0.28
HLA-F-224ENST00000475996 ZBED9Q6R2W3 1325 aa16.79■□□□□ 0.28
HLA-F-224ENST00000475996 KCNA4P22459 653 aa16.79■□□□□ 0.28
HLA-F-224ENST00000475996 CCDC27Q2M243 656 aa16.79■□□□□ 0.28
HLA-F-224ENST00000475996 NGEFQ8N5V2 710 aa16.79■□□□□ 0.28
HLA-F-224ENST00000475996 LGR6Q9HBX8 967 aa16.79■□□□□ 0.28
HLA-F-224ENST00000475996 MARCH10Q8NA82 808 aaPredicted RBP16.78■□□□□ 0.28
HLA-F-224ENST00000475996 IL17REQ8NFR9 667 aa16.78■□□□□ 0.28
HLA-F-224ENST00000475996 KDM6AO15550 1401 aaPredicted RBP16.77■□□□□ 0.28
HLA-F-224ENST00000475996 RNMTO43148 476 aaKnown RBP16.77■□□□□ 0.28
HLA-F-224ENST00000475996 HTATSF1O43719 755 aaKnown RBP16.77■□□□□ 0.28
HLA-F-224ENST00000475996 PDE3BQ13370 1112 aa16.77■□□□□ 0.28
HLA-F-224ENST00000475996 NCBP3Q53F19 620 aaKnown RBP16.77■□□□□ 0.28
HLA-F-224ENST00000475996 BRWD3Q6RI45 1802 aa16.77■□□□□ 0.28
HLA-F-224ENST00000475996 ZNF521Q96K83 1311 aa16.77■□□□□ 0.27
HLA-F-224ENST00000475996 HSP90AB1P08238 724 aaKnown RBP16.76■□□□□ 0.27
HLA-F-224ENST00000475996 SCN11AQ9UI33 1791 aa16.76■□□□□ 0.27
HLA-F-224ENST00000475996 RGS12O14924 1447 aa16.75■□□□□ 0.27
HLA-F-224ENST00000475996 NKX1-1Q15270 411 aaPredicted RBP16.75■□□□□ 0.27
HLA-F-224ENST00000475996 FAM182BQ5T319 152 aa16.75■□□□□ 0.27
HLA-F-224ENST00000475996 DCAF5Q96JK2 942 aa16.75■□□□□ 0.27
HLA-F-224ENST00000475996 LAS1LQ9Y4W2 734 aaKnown RBP16.74■□□□□ 0.27
HLA-F-224ENST00000475996 CEMIPQ8WUJ3 1361 aa16.74■□□□□ 0.27
HLA-F-224ENST00000475996 ADAMTS7Q9UKP4 1686 aa16.74■□□□□ 0.27
HLA-F-224ENST00000475996 TOGARAM1Q9Y4F4 1720 aa16.73■□□□□ 0.27
HLA-F-224ENST00000475996 WDR63Q8IWG1 891 aa16.73■□□□□ 0.27
HLA-F-224ENST00000475996 CDCA7LQ96GN5 454 aa16.73■□□□□ 0.27
HLA-F-224ENST00000475996 SPINK5Q9NQ38 1064 aaPredicted RBP16.73■□□□□ 0.27
HLA-F-224ENST00000475996 GOLGA2Q08379 1002 aa16.72■□□□□ 0.27
HLA-F-224ENST00000475996 TEFQ10587 303 aa16.72■□□□□ 0.27
HLA-F-224ENST00000475996 KRT27Q7Z3Y8 459 aa16.72■□□□□ 0.27
HLA-F-224ENST00000475996 ACSBG1Q96GR2 724 aa16.71■□□□□ 0.27
HLA-F-224ENST00000475996 DOT1LQ8TEK3 1739 aa16.71■□□□□ 0.27
HLA-F-224ENST00000475996 CALD1Q05682 793 aaKnown RBP16.7■□□□□ 0.26
HLA-F-224ENST00000475996 ITGB4P16144 1822 aa16.7■□□□□ 0.26
HLA-F-224ENST00000475996 CABP4P57796 275 aa16.7■□□□□ 0.26
HLA-F-224ENST00000475996 SLC52A2Q9HAB3 445 aa16.7■□□□□ 0.26
HLA-F-224ENST00000475996 MIS18AQ9NYP9 233 aa16.7■□□□□ 0.26
HLA-F-224ENST00000475996 SIPA1L3O60292 1781 aaPredicted RBP16.69■□□□□ 0.26
HLA-F-224ENST00000475996 ERVV-2B6SEH9 535 aa16.69■□□□□ 0.26
HLA-F-224ENST00000475996 TAF7Q15545 349 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms