RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 NLRP6P59044 892 aa8.89□□□□□ -0.99
UBR4-212ENST00000475973 CABP2Q9NPB3 220 aa8.89□□□□□ -0.99
UBR4-212ENST00000475973 TULP4Q9NRJ4 1543 aa8.89□□□□□ -0.99
UBR4-212ENST00000475973 LMOD2Q6P5Q4 547 aa8.88□□□□□ -0.99
UBR4-212ENST00000475973 ZRANB1Q9UGI0 708 aa8.88□□□□□ -0.99
UBR4-212ENST00000475973 VIRMAQ69YN4 1812 aaKnown RBP8.88□□□□□ -0.99
UBR4-212ENST00000475973 CGNL1Q0VF96 1302 aa8.87□□□□□ -0.99
UBR4-212ENST00000475973 WASLO00401 505 aaPredicted RBP8.87□□□□□ -0.99
UBR4-212ENST00000475973 WDR43Q15061 677 aaKnown RBP eCLIP8.87□□□□□ -0.993e-6■■■□□ 15.1
UBR4-212ENST00000475973 WDR63Q8IWG1 891 aa8.87□□□□□ -0.99
UBR4-212ENST00000475973 NSD2O96028 1365 aa8.86□□□□□ -0.99
UBR4-212ENST00000475973 BCL9LQ86UU0 1499 aa8.86□□□□□ -0.99
UBR4-212ENST00000475973 SENP3-EIF4A1A0A087X0R7 540 aa8.86□□□□□ -0.99
UBR4-212ENST00000475973 APAF1O14727 1248 aa8.86□□□□□ -0.99
UBR4-212ENST00000475973 CD44P16070 742 aaKnown RBP8.86□□□□□ -0.99
UBR4-212ENST00000475973 CNGB1Q14028 1251 aaPredicted RBP8.86□□□□□ -0.99
UBR4-212ENST00000475973 UNC5CLQ8IV45 518 aa8.86□□□□□ -0.99
UBR4-212ENST00000475973 WWC1Q8IX03 1113 aa8.86□□□□□ -0.99
UBR4-212ENST00000475973 PMFBP1Q8TBY8 1022 aa8.86□□□□□ -0.99
UBR4-212ENST00000475973 KCNV2Q8TDN2 545 aa8.86□□□□□ -0.99
UBR4-212ENST00000475973 SALL2Q9Y467 1007 aaPredicted RBP8.86□□□□□ -0.99
UBR4-212ENST00000475973 SLIT2O94813 1529 aa8.85□□□□□ -0.99
UBR4-212ENST00000475973 RTL5Q5HYW3 569 aaPredicted RBP8.85□□□□□ -0.99
UBR4-212ENST00000475973 NGDNQ8NEJ9 315 aaKnown RBP8.85□□□□□ -0.99
UBR4-212ENST00000475973 GJD4Q96KN9 370 aaPredicted RBP8.85□□□□□ -0.99
UBR4-212ENST00000475973 CT47B1P0C2W7 299 aaPredicted RBP8.84□□□□□ -0.99
UBR4-212ENST00000475973 ATP7BP35670 1465 aa8.83□□□□□ -1
UBR4-212ENST00000475973 PRR36Q9H6K5 1346 aa8.83□□□□□ -1
UBR4-212ENST00000475973 MAPK8IP3Q9UPT6 1336 aa8.83□□□□□ -1
UBR4-212ENST00000475973 IGHDP01880 384 aa8.83□□□□□ -1
UBR4-212ENST00000475973 NEFMP07197 916 aa8.83□□□□□ -1
UBR4-212ENST00000475973 RARSP54136 660 aaKnown RBP8.83□□□□□ -1
UBR4-212ENST00000475973 NFKBIBQ15653 356 aa8.83□□□□□ -1
UBR4-212ENST00000475973 SKAP1Q86WV1 359 aa8.83□□□□□ -1
UBR4-212ENST00000475973 CABLES1Q8TDN4 633 aa8.83□□□□□ -1
UBR4-212ENST00000475973 CCDC9Q9Y3X0 531 aaKnown RBP8.83□□□□□ -1
UBR4-212ENST00000475973 COL3A1P02461 1466 aaPredicted RBP8.83□□□□□ -1
UBR4-212ENST00000475973 CENPJQ9HC77 1338 aaPredicted RBP8.82□□□□□ -1
UBR4-212ENST00000475973 BCAR3O75815 825 aa8.82□□□□□ -1
UBR4-212ENST00000475973 VPS72Q15906 364 aa8.82□□□□□ -1
UBR4-212ENST00000475973 CLUAP1Q96AJ1 413 aa8.82□□□□□ -1
UBR4-212ENST00000475973 RUNDC1Q96C34 613 aa8.82□□□□□ -1
UBR4-212ENST00000475973 PHF12Q96QT6 1004 aa8.82□□□□□ -1
UBR4-212ENST00000475973 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.81□□□□□ -1
UBR4-212ENST00000475973 A0A0G2JS52 829 aa8.81□□□□□ -1
UBR4-212ENST00000475973 CCDC125Q86Z20 511 aa8.81□□□□□ -1
UBR4-212ENST00000475973 NUDT16Q96DE0 195 aaKnown RBP8.81□□□□□ -1
UBR4-212ENST00000475973 CDK19Q9BWU1 502 aa8.81□□□□□ -1
UBR4-212ENST00000475973 ANKRD36BQ8N2N9 1353 aa8.81□□□□□ -1
UBR4-212ENST00000475973 QRICH2Q9H0J4 1663 aa8.81□□□□□ -1
UBR4-212ENST00000475973 NSD3Q9BZ95 1437 aa8.8□□□□□ -1
UBR4-212ENST00000475973 ARHGEF28Q8N1W1 1705 aaKnown RBP8.8□□□□□ -1
UBR4-212ENST00000475973 SRPK2P78362 688 aaKnown RBP8.8□□□□□ -1
UBR4-212ENST00000475973 ANTXR1Q9H6X2 564 aa8.8□□□□□ -1
UBR4-212ENST00000475973 PRDM11Q9NQV5 511 aa8.8□□□□□ -1
UBR4-212ENST00000475973 IL16Q14005 1332 aa8.8□□□□□ -1
UBR4-212ENST00000475973 SF3B2Q13435 895 aaKnown RBP8.79□□□□□ -1
UBR4-212ENST00000475973 ARHGEF1Q92888 912 aaKnown RBP8.79□□□□□ -1
UBR4-212ENST00000475973 MS4A4AQ96JQ5 239 aa8.79□□□□□ -1
UBR4-212ENST00000475973 BTG4Q9NY30 223 aa8.79□□□□□ -1
UBR4-212ENST00000475973 GLI3P10071 1580 aa8.78□□□□□ -1
UBR4-212ENST00000475973 ITSN1Q15811 1721 aa8.78□□□□□ -1
UBR4-212ENST00000475973 TRPM3Q9HCF6 1732 aaPredicted RBP8.78□□□□□ -1
UBR4-212ENST00000475973 MARF1Q9Y4F3 1742 aaKnown RBP8.78□□□□□ -1
UBR4-212ENST00000475973 FAM83GA6ND36 823 aa8.78□□□□□ -1
UBR4-212ENST00000475973 BRPF1P55201 1214 aaPredicted RBP8.78□□□□□ -1
UBR4-212ENST00000475973 E2F4Q16254 413 aa8.78□□□□□ -1
UBR4-212ENST00000475973 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.78□□□□□ -1
UBR4-212ENST00000475973 NPM2Q86SE8 214 aaKnown RBP8.78□□□□□ -1
UBR4-212ENST00000475973 SEPT12Q8IYM1 358 aa8.78□□□□□ -1
UBR4-212ENST00000475973 PLEKHF1Q96S99 279 aa8.78□□□□□ -1
UBR4-212ENST00000475973 PPIP5K1Q6PFW1 1433 aa8.78□□□□□ -1
UBR4-212ENST00000475973 ACEP12821 1306 aa8.78□□□□□ -1
UBR4-212ENST00000475973 CD163L1Q9NR16 1453 aa8.77□□□□□ -1
UBR4-212ENST00000475973 ABCA3Q99758 1704 aa8.77□□□□□ -1
UBR4-212ENST00000475973 PLEKHG3A1L390 1219 aa8.77□□□□□ -1.01
UBR4-212ENST00000475973 CCDC146Q8IYE0 955 aa8.77□□□□□ -1.01
UBR4-212ENST00000475973 TCP11L2Q8N4U5 519 aa8.77□□□□□ -1.01
UBR4-212ENST00000475973 TBC1D32Q96NH3 1257 aa8.77□□□□□ -1.01
UBR4-212ENST00000475973 TMEM106CQ9BVX2 250 aa8.77□□□□□ -1.01
UBR4-212ENST00000475973 LAS1LQ9Y4W2 734 aaKnown RBP8.77□□□□□ -1.01
UBR4-212ENST00000475973 PCDHB15Q9Y5E8 787 aa8.77□□□□□ -1.01
UBR4-212ENST00000475973 EVC2Q86UK5 1308 aa8.77□□□□□ -1.01
UBR4-212ENST00000475973 NWD2Q9ULI1 1742 aa8.77□□□□□ -1.01
UBR4-212ENST00000475973 KIAA0232Q92628 1395 aa8.76□□□□□ -1.01
UBR4-212ENST00000475973 PLCH1Q4KWH8 1693 aa8.76□□□□□ -1.01
UBR4-212ENST00000475973 ALS2Q96Q42 1657 aa8.76□□□□□ -1.01
UBR4-212ENST00000475973 C19orf67A6NJJ6 358 aa8.76□□□□□ -1.01
UBR4-212ENST00000475973 SEC24BO95487 1268 aa8.76□□□□□ -1.01
UBR4-212ENST00000475973 RLBP1P12271 317 aa8.76□□□□□ -1.01
UBR4-212ENST00000475973 HDAC1Q13547 482 aaPredicted RBP8.76□□□□□ -1.01
UBR4-212ENST00000475973 KRT27Q7Z3Y8 459 aa8.76□□□□□ -1.01
UBR4-212ENST00000475973 ABTB2Q8N961 1025 aa8.76□□□□□ -1.01
UBR4-212ENST00000475973 COL14A1Q05707 1796 aaKnown RBP8.76□□□□□ -1.01
UBR4-212ENST00000475973 ANKRD26Q9UPS8 1709 aa8.75□□□□□ -1.01
UBR4-212ENST00000475973 ONECUT3O60422 494 aaPredicted RBP8.75□□□□□ -1.01
UBR4-212ENST00000475973 FAM98CQ17RN3 349 aaKnown RBP8.75□□□□□ -1.01
UBR4-212ENST00000475973 MS4A3Q96HJ5 214 aa8.75□□□□□ -1.01
UBR4-212ENST00000475973 SLC12A5Q9H2X9 1139 aa8.75□□□□□ -1.01
UBR4-212ENST00000475973 TOPAZ1Q8N9V7 1692 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms