RNA–Protein interactions for RNA: ENST00000475955.1

SEMA3C-208, Transcript of semaphorin 3C, humanhuman

TSL 4

Gene SEMA3C, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-208ENST00000475955 LRP5O75197 1615 aa12.89□□□□□ -0.35
SEMA3C-208ENST00000475955 KCNQ2O43526 872 aa12.89□□□□□ -0.35
SEMA3C-208ENST00000475955 HNRNPUQ00839 825 aaKnown RBP eCLIP12.89□□□□□ -0.35
SEMA3C-208ENST00000475955 R3HDM1Q15032 1099 aaKnown RBP12.89□□□□□ -0.35
SEMA3C-208ENST00000475955 NBPF6Q5VWK0 638 aa12.89□□□□□ -0.35
SEMA3C-208ENST00000475955 PROM2Q8N271 834 aa12.89□□□□□ -0.35
SEMA3C-208ENST00000475955 NBPF4Q96M43 638 aa12.89□□□□□ -0.35
SEMA3C-208ENST00000475955 BCL11BQ9C0K0 894 aaPredicted RBP12.89□□□□□ -0.35
SEMA3C-208ENST00000475955 EMILIN1Q9Y6C2 1016 aa12.89□□□□□ -0.35
SEMA3C-208ENST00000475955 PANK3Q9H999 370 aa12.88□□□□□ -0.35
SEMA3C-208ENST00000475955 DOT1LQ8TEK3 1739 aa12.88□□□□□ -0.35
SEMA3C-208ENST00000475955 INSRP06213 1382 aa12.87□□□□□ -0.35
SEMA3C-208ENST00000475955 PLSCR1O15162 318 aa12.87□□□□□ -0.35
SEMA3C-208ENST00000475955 USHBP1Q8N6Y0 703 aa12.87□□□□□ -0.35
SEMA3C-208ENST00000475955 CGNL1Q0VF96 1302 aa12.87□□□□□ -0.35
SEMA3C-208ENST00000475955 FLT4P35916 1363 aa12.86□□□□□ -0.35
SEMA3C-208ENST00000475955 ACSBG1Q96GR2 724 aa12.86□□□□□ -0.35
SEMA3C-208ENST00000475955 KIF24Q5T7B8 1368 aa12.85□□□□□ -0.35
SEMA3C-208ENST00000475955 RBM19Q9Y4C8 960 aaKnown RBP12.85□□□□□ -0.35
SEMA3C-208ENST00000475955 KIF7Q2M1P5 1343 aa12.85□□□□□ -0.35
SEMA3C-208ENST00000475955 ZBED9Q6R2W3 1325 aa12.85□□□□□ -0.35
SEMA3C-208ENST00000475955 DDX54Q8TDD1 881 aaKnown RBP12.84□□□□□ -0.35
SEMA3C-208ENST00000475955 ANO8Q9HCE9 1232 aaPredicted RBP12.84□□□□□ -0.35
SEMA3C-208ENST00000475955 PPP4R2Q9NY27 417 aa12.84□□□□□ -0.35
SEMA3C-208ENST00000475955 POLKQ9UBT6 870 aa12.84□□□□□ -0.35
SEMA3C-208ENST00000475955 PKD1L3Q7Z443 1732 aa12.84□□□□□ -0.35
SEMA3C-208ENST00000475955 FANCIQ9NVI1 1328 aa12.84□□□□□ -0.35
SEMA3C-208ENST00000475955 CASZ1Q86V15 1759 aa12.84□□□□□ -0.35
SEMA3C-208ENST00000475955 ITGB4P16144 1822 aa12.83□□□□□ -0.35
SEMA3C-208ENST00000475955 NCAPD2Q15021 1401 aa12.83□□□□□ -0.36
SEMA3C-208ENST00000475955 LY75O60449 1722 aa12.82□□□□□ -0.36
SEMA3C-208ENST00000475955 TOGARAM1Q9Y4F4 1720 aa12.82□□□□□ -0.36
SEMA3C-208ENST00000475955 SMG6Q86US8 1419 aaKnown RBP12.82□□□□□ -0.36
SEMA3C-208ENST00000475955 PAPPAQ13219 1627 aa12.82□□□□□ -0.36
SEMA3C-208ENST00000475955 PPM1GO15355 546 aaPredicted RBP12.82□□□□□ -0.36
SEMA3C-208ENST00000475955 TNNT2P45379 298 aaPredicted RBP12.82□□□□□ -0.36
SEMA3C-208ENST00000475955 TXNRD1Q16881 649 aa12.82□□□□□ -0.36
SEMA3C-208ENST00000475955 ZCRB1Q8TBF4 217 aaKnown RBP12.82□□□□□ -0.36
SEMA3C-208ENST00000475955 PRKRIP1Q9H875 184 aaPredicted RBP12.82□□□□□ -0.36
SEMA3C-208ENST00000475955 NSD2O96028 1365 aa12.81□□□□□ -0.36
SEMA3C-208ENST00000475955 EYA1Q99502 592 aa12.8□□□□□ -0.36
SEMA3C-208ENST00000475955 PDGFDQ9GZP0 370 aaPredicted RBP12.8□□□□□ -0.36
SEMA3C-208ENST00000475955 TUBGCP6Q96RT7 1819 aa12.8□□□□□ -0.36
SEMA3C-208ENST00000475955 NBPF14Q5TI25 921 aa12.79□□□□□ -0.36
SEMA3C-208ENST00000475955 TATP17735 454 aaPredicted RBP12.78□□□□□ -0.36
SEMA3C-208ENST00000475955 PRIM1P49642 420 aaKnown RBP12.78□□□□□ -0.36
SEMA3C-208ENST00000475955 EIF4A2Q14240 407 aaKnown RBP12.78□□□□□ -0.36
SEMA3C-208ENST00000475955 AMER1Q5JTC6 1135 aaPredicted RBP12.78□□□□□ -0.36
SEMA3C-208ENST00000475955 RAPGEF4Q8WZA2 1011 aa12.78□□□□□ -0.36
SEMA3C-208ENST00000475955 LRRC4BQ9NT99 713 aa12.78□□□□□ -0.36
SEMA3C-208ENST00000475955 CYP27B1O15528 508 aa12.77□□□□□ -0.37
SEMA3C-208ENST00000475955 PER1O15534 1290 aaPredicted RBP12.77□□□□□ -0.37
SEMA3C-208ENST00000475955 MRS2Q9HD23 443 aa12.77□□□□□ -0.37
SEMA3C-208ENST00000475955 TAF1LQ8IZX4 1826 aa12.76□□□□□ -0.37
SEMA3C-208ENST00000475955 QSER1Q2KHR3 1735 aa12.76□□□□□ -0.37
SEMA3C-208ENST00000475955 KCNQ4P56696 695 aa12.75□□□□□ -0.37
SEMA3C-208ENST00000475955 MORC1Q86VD1 984 aa12.75□□□□□ -0.37
SEMA3C-208ENST00000475955 SYTL4Q96C24 671 aaPredicted RBP12.75□□□□□ -0.37
SEMA3C-208ENST00000475955 KNSTRNQ9Y448 316 aa12.75□□□□□ -0.37
SEMA3C-208ENST00000475955 PCDH11XQ9BZA7 1347 aa12.74□□□□□ -0.37
SEMA3C-208ENST00000475955 PCDH11YQ9BZA8 1340 aa12.74□□□□□ -0.37
SEMA3C-208ENST00000475955 SLC15A2Q16348 729 aa12.74□□□□□ -0.37
SEMA3C-208ENST00000475955 IGSF1Q8N6C5 1336 aa12.73□□□□□ -0.37
SEMA3C-208ENST00000475955 ZNF827Q17R98 1081 aa12.73□□□□□ -0.37
SEMA3C-208ENST00000475955 ERICH6Q7L0X2 663 aa12.73□□□□□ -0.37
SEMA3C-208ENST00000475955 VIRMAQ69YN4 1812 aaKnown RBP12.73□□□□□ -0.37
SEMA3C-208ENST00000475955 STK32BQ9NY57 414 aa12.72□□□□□ -0.37
SEMA3C-208ENST00000475955 C5P01031 1676 aa12.72□□□□□ -0.37
SEMA3C-208ENST00000475955 COL24A1Q17RW2 1714 aa12.71□□□□□ -0.37
SEMA3C-208ENST00000475955 NKX1-1Q15270 411 aaPredicted RBP12.71□□□□□ -0.37
SEMA3C-208ENST00000475955 AEBP1Q8IUX7 1158 aa12.71□□□□□ -0.37
SEMA3C-208ENST00000475955 AKT1S1Q96B36 256 aa12.71□□□□□ -0.37
SEMA3C-208ENST00000475955 ZBTB7AO95365 584 aa12.7□□□□□ -0.38
SEMA3C-208ENST00000475955 IL13P35225 146 aa12.7□□□□□ -0.38
SEMA3C-208ENST00000475955 CC2D1BQ5T0F9 858 aaKnown RBP12.7□□□□□ -0.38
SEMA3C-208ENST00000475955 SPON1Q9HCB6 807 aa12.7□□□□□ -0.38
SEMA3C-208ENST00000475955 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.7□□□□□ -0.38
SEMA3C-208ENST00000475955 PHKG2P15735 406 aa12.69□□□□□ -0.38
SEMA3C-208ENST00000475955 PTGER2P43116 358 aa12.69□□□□□ -0.38
SEMA3C-208ENST00000475955 MTHFSP49914 203 aa12.69□□□□□ -0.38
SEMA3C-208ENST00000475955 SLC27A3Q5K4L6 730 aa12.69□□□□□ -0.38
SEMA3C-208ENST00000475955 MPRIPQ6WCQ1 1025 aa12.69□□□□□ -0.38
SEMA3C-208ENST00000475955 FAM9BQ8IZU0 186 aa12.69□□□□□ -0.38
SEMA3C-208ENST00000475955 SPG7Q9UQ90 795 aa12.69□□□□□ -0.38
SEMA3C-208ENST00000475955 PIGBQ92521 554 aa12.68□□□□□ -0.38
SEMA3C-208ENST00000475955 ATF5Q9Y2D1 282 aaPredicted RBP12.68□□□□□ -0.38
SEMA3C-208ENST00000475955 SCN11AQ9UI33 1791 aa12.68□□□□□ -0.38
SEMA3C-208ENST00000475955 NPC1L1Q9UHC9 1359 aa12.68□□□□□ -0.38
SEMA3C-208ENST00000475955 SGIP1Q9BQI5 828 aa12.67□□□□□ -0.38
SEMA3C-208ENST00000475955 CCNL1Q9UK58 526 aaPredicted RBP12.67□□□□□ -0.38
SEMA3C-208ENST00000475955 UBR3Q6ZT12 1888 aa12.67□□□□□ -0.38
SEMA3C-208ENST00000475955 KDRP35968 1356 aa12.67□□□□□ -0.38
SEMA3C-208ENST00000475955 COL3A1P02461 1466 aaPredicted RBP12.66□□□□□ -0.38
SEMA3C-208ENST00000475955 RNF123Q5XPI4 1314 aa12.66□□□□□ -0.38
SEMA3C-208ENST00000475955 PNPLA7Q6ZV29 1317 aa12.66□□□□□ -0.38
SEMA3C-208ENST00000475955 CNGB1Q14028 1251 aaPredicted RBP12.66□□□□□ -0.38
SEMA3C-208ENST00000475955 IFNL2Q8IZJ0 200 aa12.66□□□□□ -0.38
SEMA3C-208ENST00000475955 NUDCQ9Y266 331 aa12.66□□□□□ -0.38
SEMA3C-208ENST00000475955 PALLDQ8WX93 1383 aa12.66□□□□□ -0.38
SEMA3C-208ENST00000475955 PLEKHG2Q9H7P9 1386 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms