RNA–Protein interactions for RNA: ENST00000475819.1

LMNB2-202, Transcript of lamin B2, humanhuman

TSL 5

Gene LMNB2, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-202ENST00000475819 ARXQ96QS3 562 aa23.08■■□□□ 1.29
LMNB2-202ENST00000475819 AMPHP49418 695 aa23.07■■□□□ 1.28
LMNB2-202ENST00000475819 IP6K1Q92551 441 aa23.07■■□□□ 1.28
LMNB2-202ENST00000475819 RGPD2P0DJD1 1756 aa23.06■■□□□ 1.28
LMNB2-202ENST00000475819 CHD4Q14839 1912 aa23.06■■□□□ 1.28
LMNB2-202ENST00000475819 QSER1Q2KHR3 1735 aa23.05■■□□□ 1.28
LMNB2-202ENST00000475819 UTRNP46939 3433 aa23.04■■□□□ 1.28
LMNB2-202ENST00000475819 MAP3K19Q56UN5 1328 aa23.04■■□□□ 1.28
LMNB2-202ENST00000475819 TUBGCP6Q96RT7 1819 aa23.03■■□□□ 1.28
LMNB2-202ENST00000475819 LRRC4BQ9NT99 713 aa23.03■■□□□ 1.28
LMNB2-202ENST00000475819 SMG6Q86US8 1419 aaKnown RBP23.02■■□□□ 1.28
LMNB2-202ENST00000475819 HOXC9P31274 260 aa23.02■■□□□ 1.28
LMNB2-202ENST00000475819 SLC27A3Q5K4L6 730 aa23.02■■□□□ 1.28
LMNB2-202ENST00000475819 SGIP1Q9BQI5 828 aa23.02■■□□□ 1.28
LMNB2-202ENST00000475819 SHANK3Q9BYB0 1731 aa23.02■■□□□ 1.28
LMNB2-202ENST00000475819 POLD1P28340 1107 aa23.01■■□□□ 1.27
LMNB2-202ENST00000475819 PELP1Q8IZL8 1130 aaKnown RBP23.01■■□□□ 1.27
LMNB2-202ENST00000475819 ANKRD36BQ8N2N9 1353 aa23.01■■□□□ 1.27
LMNB2-202ENST00000475819 MEGF6O75095 1541 aa23■■□□□ 1.27
LMNB2-202ENST00000475819 ZNF784Q8NCA9 323 aaPredicted RBP23■■□□□ 1.27
LMNB2-202ENST00000475819 TFCP2L1Q9NZI6 479 aa23■■□□□ 1.27
LMNB2-202ENST00000475819 RTL1A6NKG5 1358 aa22.99■■□□□ 1.27
LMNB2-202ENST00000475819 LY75O60449 1722 aa22.99■■□□□ 1.27
LMNB2-202ENST00000475819 PRIM1P49642 420 aaKnown RBP22.98■■□□□ 1.27
LMNB2-202ENST00000475819 KCNQ4P56696 695 aa22.98■■□□□ 1.27
LMNB2-202ENST00000475819 GPR162Q16538 588 aa22.98■■□□□ 1.27
LMNB2-202ENST00000475819 KIF20BQ96Q89 1820 aa22.98■■□□□ 1.27
LMNB2-202ENST00000475819 MAP3K5Q99683 1374 aa22.98■■□□□ 1.27
LMNB2-202ENST00000475819 FBLN1P23142 703 aa22.97■■□□□ 1.27
LMNB2-202ENST00000475819 ZCRB1Q8TBF4 217 aaKnown RBP22.97■■□□□ 1.27
LMNB2-202ENST00000475819 AKT1S1Q96B36 256 aa22.97■■□□□ 1.27
LMNB2-202ENST00000475819 MSH5O43196 834 aa22.96■■□□□ 1.27
LMNB2-202ENST00000475819 PANK3Q9H999 370 aa22.96■■□□□ 1.27
LMNB2-202ENST00000475819 PNPLA7Q6ZV29 1317 aa22.96■■□□□ 1.27
LMNB2-202ENST00000475819 ANKRD26Q9UPS8 1709 aa22.96■■□□□ 1.27
LMNB2-202ENST00000475819 RRS1Q15050 365 aaKnown RBP22.95■■□□□ 1.26
LMNB2-202ENST00000475819 SLC16A10Q8TF71 515 aa22.95■■□□□ 1.26
LMNB2-202ENST00000475819 CCNL1Q9UK58 526 aaPredicted RBP22.95■■□□□ 1.26
LMNB2-202ENST00000475819 USHBP1Q8N6Y0 703 aa22.94■■□□□ 1.26
LMNB2-202ENST00000475819 RAPGEF4Q8WZA2 1011 aa22.94■■□□□ 1.26
LMNB2-202ENST00000475819 GGNBP2Q9H3C7 697 aa22.93■■□□□ 1.26
LMNB2-202ENST00000475819 NSD2O96028 1365 aa22.92■■□□□ 1.26
LMNB2-202ENST00000475819 KNSTRNQ9Y448 316 aa22.91■■□□□ 1.26
LMNB2-202ENST00000475819 C5P01031 1676 aa22.9■■□□□ 1.26
LMNB2-202ENST00000475819 ANP32CO43423 234 aa22.9■■□□□ 1.26
LMNB2-202ENST00000475819 COL24A1Q17RW2 1714 aa22.9■■□□□ 1.26
LMNB2-202ENST00000475819 NSD3Q9BZ95 1437 aa22.9■■□□□ 1.26
LMNB2-202ENST00000475819 PER1O15534 1290 aaPredicted RBP22.89■■□□□ 1.25
LMNB2-202ENST00000475819 TATP17735 454 aaPredicted RBP22.89■■□□□ 1.25
LMNB2-202ENST00000475819 CGNL1Q0VF96 1302 aa22.88■■□□□ 1.25
LMNB2-202ENST00000475819 NBPF6Q5VWK0 638 aa22.88■■□□□ 1.25
LMNB2-202ENST00000475819 NBPF4Q96M43 638 aa22.88■■□□□ 1.25
LMNB2-202ENST00000475819 NPC1L1Q9UHC9 1359 aa22.88■■□□□ 1.25
LMNB2-202ENST00000475819 PCDH11XQ9BZA7 1347 aa22.87■■□□□ 1.25
LMNB2-202ENST00000475819 PCDH11YQ9BZA8 1340 aa22.87■■□□□ 1.25
LMNB2-202ENST00000475819 SENP3-EIF4A1A0A087X0R7 540 aa22.87■■□□□ 1.25
LMNB2-202ENST00000475819 FLT4P35916 1363 aa22.87■■□□□ 1.25
LMNB2-202ENST00000475819 GOLGB1Q14789 3259 aaKnown RBP22.86■■□□□ 1.25
LMNB2-202ENST00000475819 FYB1O15117 783 aa22.85■■□□□ 1.25
LMNB2-202ENST00000475819 MSL1Q68DK7 614 aa22.85■■□□□ 1.25
LMNB2-202ENST00000475819 NLGN2Q8NFZ4 835 aa22.85■■□□□ 1.25
LMNB2-202ENST00000475819 INSRP06213 1382 aa22.83■■□□□ 1.25
LMNB2-202ENST00000475819 PALLDQ8WX93 1383 aa22.83■■□□□ 1.25
LMNB2-202ENST00000475819 HSP90AB2PQ58FF8 381 aa22.82■■□□□ 1.24
LMNB2-202ENST00000475819 CARD14Q9BXL6 1004 aa22.82■■□□□ 1.24
LMNB2-202ENST00000475819 TAF1LQ8IZX4 1826 aa22.81■■□□□ 1.24
LMNB2-202ENST00000475819 GIGYF1O75420 1035 aaPredicted RBP22.81■■□□□ 1.24
LMNB2-202ENST00000475819 MPRIPQ6WCQ1 1025 aa22.81■■□□□ 1.24
LMNB2-202ENST00000475819 COL23A1Q86Y22 540 aaPredicted RBP22.81■■□□□ 1.24
LMNB2-202ENST00000475819 TOGARAM1Q9Y4F4 1720 aa22.81■■□□□ 1.24
LMNB2-202ENST00000475819 PPM1GO15355 546 aaPredicted RBP22.8■■□□□ 1.24
LMNB2-202ENST00000475819 C1QTNF8P60827 252 aa22.8■■□□□ 1.24
LMNB2-202ENST00000475819 ITGB4P16144 1822 aa22.8■■□□□ 1.24
LMNB2-202ENST00000475819 PKD1L3Q7Z443 1732 aa22.79■■□□□ 1.24
LMNB2-202ENST00000475819 KIF24Q5T7B8 1368 aa22.79■■□□□ 1.24
LMNB2-202ENST00000475819 AMER1Q5JTC6 1135 aaPredicted RBP22.79■■□□□ 1.24
LMNB2-202ENST00000475819 PRKRIP1Q9H875 184 aaPredicted RBP22.79■■□□□ 1.24
LMNB2-202ENST00000475819 C4BP0C0L5 1744 aa22.78■■□□□ 1.24
LMNB2-202ENST00000475819 RALBP1Q15311 655 aa22.78■■□□□ 1.24
LMNB2-202ENST00000475819 HMGB2P26583 209 aaKnown RBP22.77■■□□□ 1.24
LMNB2-202ENST00000475819 AK7Q96M32 723 aa22.77■■□□□ 1.24
LMNB2-202ENST00000475819 EMILIN1Q9Y6C2 1016 aa22.76■■□□□ 1.23
LMNB2-202ENST00000475819 GRIN3BO60391 1043 aa22.75■■□□□ 1.23
LMNB2-202ENST00000475819 PHF14O94880 888 aa22.75■■□□□ 1.23
LMNB2-202ENST00000475819 MIER1Q8N108 512 aa22.75■■□□□ 1.23
LMNB2-202ENST00000475819 CC2D1BQ5T0F9 858 aaKnown RBP22.74■■□□□ 1.23
LMNB2-202ENST00000475819 FLAD1Q8NFF5 587 aa22.74■■□□□ 1.23
LMNB2-202ENST00000475819 CYP27B1O15528 508 aa22.73■■□□□ 1.23
LMNB2-202ENST00000475819 YBX3P16989 372 aaKnown RBP eCLIP22.73■■□□□ 1.232e-8■□□□□ 8.6
LMNB2-202ENST00000475819 SMARCC1Q92922 1105 aaPredicted RBP22.73■■□□□ 1.23
LMNB2-202ENST00000475819 SPG7Q9UQ90 795 aa22.71■■□□□ 1.23
LMNB2-202ENST00000475819 UBR3Q6ZT12 1888 aa22.71■■□□□ 1.23
LMNB2-202ENST00000475819 MAP2P11137 1827 aaKnown RBP22.7■■□□□ 1.22
LMNB2-202ENST00000475819 MYBBP1AQ9BQG0 1328 aaKnown RBP22.69■■□□□ 1.22
LMNB2-202ENST00000475819 CCER2I3L3R5 266 aa22.69■■□□□ 1.22
LMNB2-202ENST00000475819 CNGB1Q14028 1251 aaPredicted RBP22.68■■□□□ 1.22
LMNB2-202ENST00000475819 MORC1Q86VD1 984 aa22.67■■□□□ 1.22
LMNB2-202ENST00000475819 TMOD3Q9NYL9 352 aa22.67■■□□□ 1.22
LMNB2-202ENST00000475819 WWC3Q9ULE0 1092 aa22.67■■□□□ 1.22
LMNB2-202ENST00000475819 CD2APQ9Y5K6 639 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms