RNA–Protein interactions for RNA: ENST00000475775.1

TRIM11-203, Transcript of tripartite motif containing 11, humanhuman

TSL 2

Gene TRIM11, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-203ENST00000475775 COG3Q96JB2 828 aa20.71■□□□□ 0.91
TRIM11-203ENST00000475775 AKT1S1Q96B36 256 aa20.7■□□□□ 0.9
TRIM11-203ENST00000475775 ANKRD36BQ8N2N9 1353 aa20.7■□□□□ 0.9
TRIM11-203ENST00000475775 FAM208AQ9UK61 1670 aaKnown RBP20.69■□□□□ 0.9
TRIM11-203ENST00000475775 TMF1P82094 1093 aa20.68■□□□□ 0.9
TRIM11-203ENST00000475775 IP6K1Q92551 441 aa20.68■□□□□ 0.9
TRIM11-203ENST00000475775 GRIN3BO60391 1043 aa20.67■□□□□ 0.9
TRIM11-203ENST00000475775 PNPLA7Q6ZV29 1317 aa20.67■□□□□ 0.9
TRIM11-203ENST00000475775 YBX3P16989 372 aaKnown RBP eCLIP20.66■□□□□ 0.9
TRIM11-203ENST00000475775 USP47Q96K76 1375 aa20.65■□□□□ 0.9
TRIM11-203ENST00000475775 CDCA8Q53HL2 280 aa20.65■□□□□ 0.9
TRIM11-203ENST00000475775 SLC27A3Q5K4L6 730 aa20.65■□□□□ 0.9
TRIM11-203ENST00000475775 TFCP2L1Q9NZI6 479 aa20.65■□□□□ 0.9
TRIM11-203ENST00000475775 RTL1A6NKG5 1358 aa20.64■□□□□ 0.89
TRIM11-203ENST00000475775 AMPHP49418 695 aa20.63■□□□□ 0.89
TRIM11-203ENST00000475775 LY75O60449 1722 aa20.63■□□□□ 0.89
TRIM11-203ENST00000475775 ATP10DQ9P241 1426 aa20.62■□□□□ 0.89
TRIM11-203ENST00000475775 MAP3K19Q56UN5 1328 aa20.62■□□□□ 0.89
TRIM11-203ENST00000475775 KCNQ4P56696 695 aa20.62■□□□□ 0.89
TRIM11-203ENST00000475775 CLSPNQ9HAW4 1339 aa20.61■□□□□ 0.89
TRIM11-203ENST00000475775 HOXC9P31274 260 aa20.61■□□□□ 0.89
TRIM11-203ENST00000475775 LTV1Q96GA3 475 aaPredicted RBP20.61■□□□□ 0.89
TRIM11-203ENST00000475775 SMG6Q86US8 1419 aaKnown RBP20.61■□□□□ 0.89
TRIM11-203ENST00000475775 HSPA6P17066 643 aa20.6■□□□□ 0.89
TRIM11-203ENST00000475775 GPBP1L1Q9HC44 474 aaPredicted RBP20.6■□□□□ 0.89
TRIM11-203ENST00000475775 DDX54Q8TDD1 881 aaKnown RBP20.58■□□□□ 0.89
TRIM11-203ENST00000475775 TIMELESSQ9UNS1 1208 aa20.58■□□□□ 0.89
TRIM11-203ENST00000475775 DOT1LQ8TEK3 1739 aa20.57■□□□□ 0.88
TRIM11-203ENST00000475775 MSH5O43196 834 aa20.56■□□□□ 0.88
TRIM11-203ENST00000475775 SYTL4Q96C24 671 aaPredicted RBP20.56■□□□□ 0.88
TRIM11-203ENST00000475775 FYB1O15117 783 aa20.55■□□□□ 0.88
TRIM11-203ENST00000475775 ZNF526Q8TF50 670 aaPredicted RBP20.55■□□□□ 0.88
TRIM11-203ENST00000475775 CGNL1Q0VF96 1302 aa20.54■□□□□ 0.88
TRIM11-203ENST00000475775 PRIM1P49642 420 aaKnown RBP20.54■□□□□ 0.88
TRIM11-203ENST00000475775 COL23A1Q86Y22 540 aaPredicted RBP20.54■□□□□ 0.88
TRIM11-203ENST00000475775 GGNBP2Q9H3C7 697 aa20.54■□□□□ 0.88
TRIM11-203ENST00000475775 KIF24Q5T7B8 1368 aa20.54■□□□□ 0.88
TRIM11-203ENST00000475775 RRS1Q15050 365 aaKnown RBP20.52■□□□□ 0.88
TRIM11-203ENST00000475775 ZCRB1Q8TBF4 217 aaKnown RBP20.52■□□□□ 0.88
TRIM11-203ENST00000475775 MEGF6O75095 1541 aa20.52■□□□□ 0.87
TRIM11-203ENST00000475775 RGPD2P0DJD1 1756 aa20.51■□□□□ 0.87
TRIM11-203ENST00000475775 FLT4P35916 1363 aa20.51■□□□□ 0.87
TRIM11-203ENST00000475775 MSL1Q68DK7 614 aa20.51■□□□□ 0.87
TRIM11-203ENST00000475775 RAPGEF4Q8WZA2 1011 aa20.51■□□□□ 0.87
TRIM11-203ENST00000475775 CCNL1Q9UK58 526 aaPredicted RBP20.51■□□□□ 0.87
TRIM11-203ENST00000475775 INSRP06213 1382 aa20.5■□□□□ 0.87
TRIM11-203ENST00000475775 KIF20BQ96Q89 1820 aa20.5■□□□□ 0.87
TRIM11-203ENST00000475775 ADCY9O60503 1353 aa20.49■□□□□ 0.87
TRIM11-203ENST00000475775 FBLN1P23142 703 aa20.49■□□□□ 0.87
TRIM11-203ENST00000475775 CD2APQ9Y5K6 639 aa20.49■□□□□ 0.87
TRIM11-203ENST00000475775 TAF1LQ8IZX4 1826 aa20.48■□□□□ 0.87
TRIM11-203ENST00000475775 CCER1Q8TC90 406 aaPredicted RBP20.48■□□□□ 0.87
TRIM11-203ENST00000475775 NSD2O96028 1365 aa20.47■□□□□ 0.87
TRIM11-203ENST00000475775 NSD3Q9BZ95 1437 aa20.47■□□□□ 0.87
TRIM11-203ENST00000475775 TATP17735 454 aaPredicted RBP20.47■□□□□ 0.87
TRIM11-203ENST00000475775 NBPF6Q5VWK0 638 aa20.47■□□□□ 0.87
TRIM11-203ENST00000475775 NBPF4Q96M43 638 aa20.47■□□□□ 0.87
TRIM11-203ENST00000475775 C5P01031 1676 aa20.47■□□□□ 0.87
TRIM11-203ENST00000475775 HMGB2P26583 209 aaKnown RBP20.46■□□□□ 0.87
TRIM11-203ENST00000475775 PCDH11XQ9BZA7 1347 aa20.46■□□□□ 0.87
TRIM11-203ENST00000475775 PCDH11YQ9BZA8 1340 aa20.46■□□□□ 0.87
TRIM11-203ENST00000475775 USHBP1Q8N6Y0 703 aa20.44■□□□□ 0.86
TRIM11-203ENST00000475775 HSP90AB2PQ58FF8 381 aa20.43■□□□□ 0.86
TRIM11-203ENST00000475775 KIF3CO14782 793 aa20.42■□□□□ 0.86
TRIM11-203ENST00000475775 CARD14Q9BXL6 1004 aa20.41■□□□□ 0.86
TRIM11-203ENST00000475775 WWC3Q9ULE0 1092 aa20.41■□□□□ 0.86
TRIM11-203ENST00000475775 PCNTO95613 3336 aa20.41■□□□□ 0.86
TRIM11-203ENST00000475775 IGSF1Q8N6C5 1336 aa20.39■□□□□ 0.85
TRIM11-203ENST00000475775 APLP1P51693 650 aa20.39■□□□□ 0.85
TRIM11-203ENST00000475775 FLAD1Q8NFF5 587 aa20.39■□□□□ 0.85
TRIM11-203ENST00000475775 EMILIN1Q9Y6C2 1016 aa20.38■□□□□ 0.85
TRIM11-203ENST00000475775 UBR3Q6ZT12 1888 aa20.37■□□□□ 0.85
TRIM11-203ENST00000475775 PPM1GO15355 546 aaPredicted RBP20.37■□□□□ 0.85
TRIM11-203ENST00000475775 DNAJC5GQ8N7S2 189 aa20.37■□□□□ 0.85
TRIM11-203ENST00000475775 ITGB4P16144 1822 aa20.37■□□□□ 0.85
TRIM11-203ENST00000475775 ANKRD26Q9UPS8 1709 aa20.36■□□□□ 0.85
TRIM11-203ENST00000475775 NCAPD2Q15021 1401 aa20.36■□□□□ 0.85
TRIM11-203ENST00000475775 WASHC2AQ641Q2 1341 aa20.35■□□□□ 0.85
TRIM11-203ENST00000475775 PALLDQ8WX93 1383 aa20.34■□□□□ 0.85
TRIM11-203ENST00000475775 C4BP0C0L5 1744 aa20.34■□□□□ 0.85
TRIM11-203ENST00000475775 POLR3GLQ9BT43 218 aa20.34■□□□□ 0.85
TRIM11-203ENST00000475775 SPG7Q9UQ90 795 aa20.34■□□□□ 0.85
TRIM11-203ENST00000475775 TOGARAM1Q9Y4F4 1720 aa20.33■□□□□ 0.85
TRIM11-203ENST00000475775 EIF4G2P78344 907 aaKnown RBP eCLIP20.33■□□□□ 0.85
TRIM11-203ENST00000475775 SMARCC1Q92922 1105 aaPredicted RBP20.33■□□□□ 0.85
TRIM11-203ENST00000475775 PKD1L3Q7Z443 1732 aa20.33■□□□□ 0.84
TRIM11-203ENST00000475775 TOMM70O94826 608 aa20.32■□□□□ 0.84
TRIM11-203ENST00000475775 MPRIPQ6WCQ1 1025 aa20.32■□□□□ 0.84
TRIM11-203ENST00000475775 WDR90Q96KV7 1748 aa20.32■□□□□ 0.84
TRIM11-203ENST00000475775 PLEKHG2Q9H7P9 1386 aa20.32■□□□□ 0.84
TRIM11-203ENST00000475775 CYP27B1O15528 508 aa20.31■□□□□ 0.84
TRIM11-203ENST00000475775 N4BP2Q86UW6 1770 aaPredicted RBP20.31■□□□□ 0.84
TRIM11-203ENST00000475775 SMIM5Q71RC9 77 aa20.3■□□□□ 0.84
TRIM11-203ENST00000475775 AMIGO3Q86WK7 504 aa20.3■□□□□ 0.84
TRIM11-203ENST00000475775 AK7Q96M32 723 aa20.3■□□□□ 0.84
TRIM11-203ENST00000475775 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.3■□□□□ 0.84
TRIM11-203ENST00000475775 PHF14O94880 888 aa20.29■□□□□ 0.84
TRIM11-203ENST00000475775 CICQ96RK0 1608 aaPredicted RBP20.28■□□□□ 0.84
TRIM11-203ENST00000475775 NKX1-1Q15270 411 aaPredicted RBP20.28■□□□□ 0.84
TRIM11-203ENST00000475775 POLKQ9UBT6 870 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms