RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 AKT1S1Q96B36 256 aa17.44■□□□□ 0.38
CCDC57-208ENST00000475635 SYTL4Q96C24 671 aaPredicted RBP17.44■□□□□ 0.38
CCDC57-208ENST00000475635 RTL1A6NKG5 1358 aa17.43■□□□□ 0.38
CCDC57-208ENST00000475635 PRIM1P49642 420 aaKnown RBP17.43■□□□□ 0.38
CCDC57-208ENST00000475635 GOLGB1Q14789 3259 aaKnown RBP17.42■□□□□ 0.38
CCDC57-208ENST00000475635 RRS1Q15050 365 aaKnown RBP17.42■□□□□ 0.38
CCDC57-208ENST00000475635 ZCRB1Q8TBF4 217 aaKnown RBP17.42■□□□□ 0.38
CCDC57-208ENST00000475635 NSD2O96028 1365 aa17.41■□□□□ 0.38
CCDC57-208ENST00000475635 MAP3K5Q99683 1374 aa17.41■□□□□ 0.38
CCDC57-208ENST00000475635 KCNQ4P56696 695 aa17.41■□□□□ 0.38
CCDC57-208ENST00000475635 USP47Q96K76 1375 aa17.4■□□□□ 0.38
CCDC57-208ENST00000475635 ITGB4P16144 1822 aa17.4■□□□□ 0.38
CCDC57-208ENST00000475635 TAF1LQ8IZX4 1826 aa17.4■□□□□ 0.38
CCDC57-208ENST00000475635 FYB1O15117 783 aa17.4■□□□□ 0.38
CCDC57-208ENST00000475635 TMF1P82094 1093 aa17.4■□□□□ 0.38
CCDC57-208ENST00000475635 GGNBP2Q9H3C7 697 aa17.4■□□□□ 0.38
CCDC57-208ENST00000475635 PNPLA7Q6ZV29 1317 aa17.4■□□□□ 0.38
CCDC57-208ENST00000475635 NBPF6Q5VWK0 638 aa17.39■□□□□ 0.37
CCDC57-208ENST00000475635 SLC16A10Q8TF71 515 aa17.39■□□□□ 0.37
CCDC57-208ENST00000475635 NBPF4Q96M43 638 aa17.39■□□□□ 0.37
CCDC57-208ENST00000475635 MAP2P11137 1827 aaKnown RBP17.39■□□□□ 0.37
CCDC57-208ENST00000475635 C5P01031 1676 aa17.39■□□□□ 0.37
CCDC57-208ENST00000475635 SMG6Q86US8 1419 aaKnown RBP17.38■□□□□ 0.37
CCDC57-208ENST00000475635 USHBP1Q8N6Y0 703 aa17.38■□□□□ 0.37
CCDC57-208ENST00000475635 ZNF784Q8NCA9 323 aaPredicted RBP17.38■□□□□ 0.37
CCDC57-208ENST00000475635 TFCP2L1Q9NZI6 479 aa17.38■□□□□ 0.37
CCDC57-208ENST00000475635 POLD1P28340 1107 aa17.37■□□□□ 0.37
CCDC57-208ENST00000475635 CGNL1Q0VF96 1302 aa17.37■□□□□ 0.37
CCDC57-208ENST00000475635 KLHL34Q8N239 644 aa17.36■□□□□ 0.37
CCDC57-208ENST00000475635 RAPGEF4Q8WZA2 1011 aa17.36■□□□□ 0.37
CCDC57-208ENST00000475635 CCNL1Q9UK58 526 aaPredicted RBP17.36■□□□□ 0.37
CCDC57-208ENST00000475635 PKD1L3Q7Z443 1732 aa17.35■□□□□ 0.37
CCDC57-208ENST00000475635 TOGARAM1Q9Y4F4 1720 aa17.35■□□□□ 0.37
CCDC57-208ENST00000475635 INSRP06213 1382 aa17.34■□□□□ 0.37
CCDC57-208ENST00000475635 CDCA8Q53HL2 280 aa17.34■□□□□ 0.37
CCDC57-208ENST00000475635 HSP90AB2PQ58FF8 381 aa17.34■□□□□ 0.37
CCDC57-208ENST00000475635 ANKRD26Q9UPS8 1709 aa17.33■□□□□ 0.37
CCDC57-208ENST00000475635 FLT4P35916 1363 aa17.33■□□□□ 0.36
CCDC57-208ENST00000475635 TATP17735 454 aaPredicted RBP17.33■□□□□ 0.36
CCDC57-208ENST00000475635 GPR162Q16538 588 aa17.33■□□□□ 0.36
CCDC57-208ENST00000475635 KIF24Q5T7B8 1368 aa17.32■□□□□ 0.36
CCDC57-208ENST00000475635 PCDH11XQ9BZA7 1347 aa17.31■□□□□ 0.36
CCDC57-208ENST00000475635 PCDH11YQ9BZA8 1340 aa17.31■□□□□ 0.36
CCDC57-208ENST00000475635 MSH5O43196 834 aa17.31■□□□□ 0.36
CCDC57-208ENST00000475635 COL23A1Q86Y22 540 aaPredicted RBP17.3■□□□□ 0.36
CCDC57-208ENST00000475635 NSD3Q9BZ95 1437 aa17.3■□□□□ 0.36
CCDC57-208ENST00000475635 UBR3Q6ZT12 1888 aa17.29■□□□□ 0.36
CCDC57-208ENST00000475635 PELP1Q8IZL8 1130 aaKnown RBP17.29■□□□□ 0.36
CCDC57-208ENST00000475635 NLGN2Q8NFZ4 835 aa17.29■□□□□ 0.36
CCDC57-208ENST00000475635 CARD14Q9BXL6 1004 aa17.29■□□□□ 0.36
CCDC57-208ENST00000475635 C4BP0C0L5 1744 aa17.28■□□□□ 0.36
CCDC57-208ENST00000475635 TRIM26Q12899 539 aaPredicted RBP17.28■□□□□ 0.36
CCDC57-208ENST00000475635 EMILIN1Q9Y6C2 1016 aa17.28■□□□□ 0.36
CCDC57-208ENST00000475635 PALLDQ8WX93 1383 aa17.28■□□□□ 0.36
CCDC57-208ENST00000475635 CYP27B1O15528 508 aa17.27■□□□□ 0.36
CCDC57-208ENST00000475635 MPRIPQ6WCQ1 1025 aa17.27■□□□□ 0.36
CCDC57-208ENST00000475635 MSL1Q68DK7 614 aa17.26■□□□□ 0.35
CCDC57-208ENST00000475635 NCAPD2Q15021 1401 aa17.25■□□□□ 0.35
CCDC57-208ENST00000475635 PPM1GO15355 546 aaPredicted RBP17.25■□□□□ 0.35
CCDC57-208ENST00000475635 HMGB2P26583 209 aaKnown RBP17.24■□□□□ 0.35
CCDC57-208ENST00000475635 FLAD1Q8NFF5 587 aa17.22■□□□□ 0.35
CCDC57-208ENST00000475635 SMARCC1Q92922 1105 aaPredicted RBP17.22■□□□□ 0.35
CCDC57-208ENST00000475635 YBX3P16989 372 aaKnown RBP eCLIP17.21■□□□□ 0.35
CCDC57-208ENST00000475635 C1QTNF8P60827 252 aa17.21■□□□□ 0.35
CCDC57-208ENST00000475635 PIGBQ92521 554 aa17.21■□□□□ 0.35
CCDC57-208ENST00000475635 SPG7Q9UQ90 795 aa17.21■□□□□ 0.35
CCDC57-208ENST00000475635 WASHC2AQ641Q2 1341 aa17.21■□□□□ 0.34
CCDC57-208ENST00000475635 GRIN3BO60391 1043 aa17.2■□□□□ 0.34
CCDC57-208ENST00000475635 NKX1-1Q15270 411 aaPredicted RBP17.2■□□□□ 0.34
CCDC57-208ENST00000475635 AK7Q96M32 723 aa17.2■□□□□ 0.34
CCDC57-208ENST00000475635 SENP3-EIF4A1A0A087X0R7 540 aa17.19■□□□□ 0.34
CCDC57-208ENST00000475635 EYA1Q99502 592 aa17.19■□□□□ 0.34
CCDC57-208ENST00000475635 AMIGO3Q86WK7 504 aa17.18■□□□□ 0.34
CCDC57-208ENST00000475635 TIMELESSQ9UNS1 1208 aa17.18■□□□□ 0.34
CCDC57-208ENST00000475635 CD2APQ9Y5K6 639 aa17.18■□□□□ 0.34
CCDC57-208ENST00000475635 GIGYF1O75420 1035 aaPredicted RBP17.17■□□□□ 0.34
CCDC57-208ENST00000475635 PHF14O94880 888 aa17.17■□□□□ 0.34
CCDC57-208ENST00000475635 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.17■□□□□ 0.34
CCDC57-208ENST00000475635 POLKQ9UBT6 870 aa17.17■□□□□ 0.34
CCDC57-208ENST00000475635 LOC102724428A0A0B4J2F2 783 aa17.16■□□□□ 0.34
CCDC57-208ENST00000475635 SIK1P57059 783 aa17.16■□□□□ 0.34
CCDC57-208ENST00000475635 POLR3GLQ9BT43 218 aa17.16■□□□□ 0.34
CCDC57-208ENST00000475635 TMOD3Q9NYL9 352 aa17.16■□□□□ 0.34
CCDC57-208ENST00000475635 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.15■□□□□ 0.34
CCDC57-208ENST00000475635 SMIM5Q71RC9 77 aa17.15■□□□□ 0.34
CCDC57-208ENST00000475635 PHKG2P15735 406 aa17.14■□□□□ 0.33
CCDC57-208ENST00000475635 TNNT2P45379 298 aaPredicted RBP17.14■□□□□ 0.33
CCDC57-208ENST00000475635 IFNL2Q8IZJ0 200 aa17.14■□□□□ 0.33
CCDC57-208ENST00000475635 LINC00116Q8NCU8 138 aa17.14■□□□□ 0.33
CCDC57-208ENST00000475635 ASAP1Q9ULH1 1129 aa17.14■□□□□ 0.33
CCDC57-208ENST00000475635 COL5A3P25940 1745 aaPredicted RBP17.13■□□□□ 0.33
CCDC57-208ENST00000475635 KIF13BQ9NQT8 1826 aa17.13■□□□□ 0.33
CCDC57-208ENST00000475635 SSFA2P28290 1259 aa17.13■□□□□ 0.33
CCDC57-208ENST00000475635 EIF4A2Q14240 407 aaKnown RBP17.13■□□□□ 0.33
CCDC57-208ENST00000475635 ZNF831Q5JPB2 1677 aa17.13■□□□□ 0.33
CCDC57-208ENST00000475635 ITPK1Q13572 414 aa17.12■□□□□ 0.33
CCDC57-208ENST00000475635 MYH14Q7Z406 1995 aaKnown RBP17.11■□□□□ 0.33
CCDC57-208ENST00000475635 N4BP2Q86UW6 1770 aaPredicted RBP17.11■□□□□ 0.33
CCDC57-208ENST00000475635 ATP6V1AP38606 617 aa17.11■□□□□ 0.33
CCDC57-208ENST00000475635 PCGF6Q9BYE7 350 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms