RNA–Protein interactions for RNA: ENST00000475605.1

CDPF1-206, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 2

Gene CDPF1, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-206ENST00000475605 ANKRD36BQ8N2N9 1353 aa22.13■■□□□ 1.13
CDPF1-206ENST00000475605 MAP3K5Q99683 1374 aa22.13■■□□□ 1.13
CDPF1-206ENST00000475605 RRS1Q15050 365 aaKnown RBP22.13■■□□□ 1.13
CDPF1-206ENST00000475605 ZCRB1Q8TBF4 217 aaKnown RBP22.13■■□□□ 1.13
CDPF1-206ENST00000475605 KLHL34Q8N239 644 aa22.12■■□□□ 1.13
CDPF1-206ENST00000475605 TFCP2L1Q9NZI6 479 aa22.12■■□□□ 1.13
CDPF1-206ENST00000475605 TUBGCP6Q96RT7 1819 aa22.12■■□□□ 1.13
CDPF1-206ENST00000475605 QSER1Q2KHR3 1735 aa22.11■■□□□ 1.13
CDPF1-206ENST00000475605 NBPF6Q5VWK0 638 aa22.11■■□□□ 1.13
CDPF1-206ENST00000475605 USHBP1Q8N6Y0 703 aa22.11■■□□□ 1.13
CDPF1-206ENST00000475605 SLC16A10Q8TF71 515 aa22.11■■□□□ 1.13
CDPF1-206ENST00000475605 NBPF4Q96M43 638 aa22.11■■□□□ 1.13
CDPF1-206ENST00000475605 CHD4Q14839 1912 aa22.11■■□□□ 1.13
CDPF1-206ENST00000475605 GGNBP2Q9H3C7 697 aa22.1■■□□□ 1.13
CDPF1-206ENST00000475605 LY75O60449 1722 aa22.09■■□□□ 1.13
CDPF1-206ENST00000475605 FYB1O15117 783 aa22.09■■□□□ 1.13
CDPF1-206ENST00000475605 POLD1P28340 1107 aa22.08■■□□□ 1.13
CDPF1-206ENST00000475605 GPR162Q16538 588 aa22.08■■□□□ 1.13
CDPF1-206ENST00000475605 PCGF6Q9BYE7 350 aa22.08■■□□□ 1.13
CDPF1-206ENST00000475605 COL24A1Q17RW2 1714 aa22.08■■□□□ 1.12
CDPF1-206ENST00000475605 CCNL1Q9UK58 526 aaPredicted RBP22.07■■□□□ 1.12
CDPF1-206ENST00000475605 RTL1A6NKG5 1358 aa22.06■■□□□ 1.12
CDPF1-206ENST00000475605 PELP1Q8IZL8 1130 aaKnown RBP22.05■■□□□ 1.12
CDPF1-206ENST00000475605 NLGN2Q8NFZ4 835 aa22.05■■□□□ 1.12
CDPF1-206ENST00000475605 SLC24A1O60721 1099 aa22.04■■□□□ 1.12
CDPF1-206ENST00000475605 HSP90AB2PQ58FF8 381 aa22.03■■□□□ 1.12
CDPF1-206ENST00000475605 USP47Q96K76 1375 aa22.02■■□□□ 1.12
CDPF1-206ENST00000475605 MSH5O43196 834 aa22.02■■□□□ 1.12
CDPF1-206ENST00000475605 TMF1P82094 1093 aa22.02■■□□□ 1.12
CDPF1-206ENST00000475605 COL23A1Q86Y22 540 aaPredicted RBP22.02■■□□□ 1.12
CDPF1-206ENST00000475605 RAPGEF4Q8WZA2 1011 aa22.02■■□□□ 1.12
CDPF1-206ENST00000475605 CGNL1Q0VF96 1302 aa22.01■■□□□ 1.11
CDPF1-206ENST00000475605 TATP17735 454 aaPredicted RBP22■■□□□ 1.11
CDPF1-206ENST00000475605 SMG6Q86US8 1419 aaKnown RBP21.99■■□□□ 1.11
CDPF1-206ENST00000475605 MSL1Q68DK7 614 aa21.99■■□□□ 1.11
CDPF1-206ENST00000475605 INSRP06213 1382 aa21.99■■□□□ 1.11
CDPF1-206ENST00000475605 C1QTNF8P60827 252 aa21.98■■□□□ 1.11
CDPF1-206ENST00000475605 KIF20BQ96Q89 1820 aa21.97■■□□□ 1.11
CDPF1-206ENST00000475605 CYP27B1O15528 508 aa21.96■■□□□ 1.11
CDPF1-206ENST00000475605 YBX3P16989 372 aaKnown RBP eCLIP21.96■■□□□ 1.11
CDPF1-206ENST00000475605 MPRIPQ6WCQ1 1025 aa21.96■■□□□ 1.11
CDPF1-206ENST00000475605 CARD14Q9BXL6 1004 aa21.96■■□□□ 1.11
CDPF1-206ENST00000475605 PCDH11XQ9BZA7 1347 aa21.96■■□□□ 1.11
CDPF1-206ENST00000475605 PCDH11YQ9BZA8 1340 aa21.96■■□□□ 1.11
CDPF1-206ENST00000475605 FLT4P35916 1363 aa21.96■■□□□ 1.11
CDPF1-206ENST00000475605 C5P01031 1676 aa21.95■■□□□ 1.1
CDPF1-206ENST00000475605 SENP3-EIF4A1A0A087X0R7 540 aa21.95■■□□□ 1.1
CDPF1-206ENST00000475605 EMILIN1Q9Y6C2 1016 aa21.95■■□□□ 1.1
CDPF1-206ENST00000475605 PALLDQ8WX93 1383 aa21.94■■□□□ 1.1
CDPF1-206ENST00000475605 TOGARAM1Q9Y4F4 1720 aa21.92■■□□□ 1.1
CDPF1-206ENST00000475605 TAF1LQ8IZX4 1826 aa21.92■■□□□ 1.1
CDPF1-206ENST00000475605 KIF24Q5T7B8 1368 aa21.91■■□□□ 1.1
CDPF1-206ENST00000475605 ITGB4P16144 1822 aa21.9■■□□□ 1.1
CDPF1-206ENST00000475605 CDCA8Q53HL2 280 aa21.9■■□□□ 1.1
CDPF1-206ENST00000475605 SMIM5Q71RC9 77 aa21.9■■□□□ 1.1
CDPF1-206ENST00000475605 AMIGO3Q86WK7 504 aa21.9■■□□□ 1.1
CDPF1-206ENST00000475605 NSD3Q9BZ95 1437 aa21.89■■□□□ 1.1
CDPF1-206ENST00000475605 GOLGB1Q14789 3259 aaKnown RBP21.89■■□□□ 1.09
CDPF1-206ENST00000475605 PPM1GO15355 546 aaPredicted RBP21.89■■□□□ 1.09
CDPF1-206ENST00000475605 GRIN3BO60391 1043 aa21.88■■□□□ 1.09
CDPF1-206ENST00000475605 GIGYF1O75420 1035 aaPredicted RBP21.88■■□□□ 1.09
CDPF1-206ENST00000475605 PIGBQ92521 554 aa21.88■■□□□ 1.09
CDPF1-206ENST00000475605 PKD1L3Q7Z443 1732 aa21.87■■□□□ 1.09
CDPF1-206ENST00000475605 FLAD1Q8NFF5 587 aa21.87■■□□□ 1.09
CDPF1-206ENST00000475605 C4BP0C0L5 1744 aa21.86■■□□□ 1.09
CDPF1-206ENST00000475605 SMARCC1Q92922 1105 aaPredicted RBP21.86■■□□□ 1.09
CDPF1-206ENST00000475605 PHF14O94880 888 aa21.85■■□□□ 1.09
CDPF1-206ENST00000475605 AK7Q96M32 723 aa21.85■■□□□ 1.09
CDPF1-206ENST00000475605 CD2APQ9Y5K6 639 aa21.85■■□□□ 1.09
CDPF1-206ENST00000475605 NCAPD2Q15021 1401 aa21.85■■□□□ 1.09
CDPF1-206ENST00000475605 NKX1-1Q15270 411 aaPredicted RBP21.84■■□□□ 1.09
CDPF1-206ENST00000475605 EYA1Q99502 592 aa21.84■■□□□ 1.09
CDPF1-206ENST00000475605 WASHC2AQ641Q2 1341 aa21.82■■□□□ 1.08
CDPF1-206ENST00000475605 UBR3Q6ZT12 1888 aa21.82■■□□□ 1.08
CDPF1-206ENST00000475605 SPG7Q9UQ90 795 aa21.82■■□□□ 1.08
CDPF1-206ENST00000475605 ANKRD26Q9UPS8 1709 aa21.82■■□□□ 1.08
CDPF1-206ENST00000475605 MAP2P11137 1827 aaKnown RBP21.82■■□□□ 1.08
CDPF1-206ENST00000475605 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.81■■□□□ 1.08
CDPF1-206ENST00000475605 LINC00116Q8NCU8 138 aa21.81■■□□□ 1.08
CDPF1-206ENST00000475605 WWC3Q9ULE0 1092 aa21.81■■□□□ 1.08
CDPF1-206ENST00000475605 LOC102724428A0A0B4J2F2 783 aa21.8■■□□□ 1.08
CDPF1-206ENST00000475605 HMGB2P26583 209 aaKnown RBP21.8■■□□□ 1.08
CDPF1-206ENST00000475605 SIK1P57059 783 aa21.8■■□□□ 1.08
CDPF1-206ENST00000475605 POLKQ9UBT6 870 aa21.8■■□□□ 1.08
CDPF1-206ENST00000475605 ASAP1Q9ULH1 1129 aa21.8■■□□□ 1.08
CDPF1-206ENST00000475605 ATP10DQ9P241 1426 aa21.79■■□□□ 1.08
CDPF1-206ENST00000475605 PHKG2P15735 406 aa21.78■■□□□ 1.08
CDPF1-206ENST00000475605 ITPK1Q13572 414 aa21.78■■□□□ 1.08
CDPF1-206ENST00000475605 CCER1Q8TC90 406 aaPredicted RBP21.78■■□□□ 1.08
CDPF1-206ENST00000475605 TMOD3Q9NYL9 352 aa21.78■■□□□ 1.08
CDPF1-206ENST00000475605 TNNT2P45379 298 aaPredicted RBP21.77■■□□□ 1.08
CDPF1-206ENST00000475605 POLR3GLQ9BT43 218 aa21.77■■□□□ 1.08
CDPF1-206ENST00000475605 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.77■■□□□ 1.08
CDPF1-206ENST00000475605 CLSPNQ9HAW4 1339 aa21.77■■□□□ 1.07
CDPF1-206ENST00000475605 SSFA2P28290 1259 aa21.76■■□□□ 1.07
CDPF1-206ENST00000475605 IFNL2Q8IZJ0 200 aa21.76■■□□□ 1.07
CDPF1-206ENST00000475605 ATP6V1AP38606 617 aa21.75■■□□□ 1.07
CDPF1-206ENST00000475605 EIF4A2Q14240 407 aaKnown RBP21.75■■□□□ 1.07
CDPF1-206ENST00000475605 IGSF1Q8N6C5 1336 aa21.75■■□□□ 1.07
CDPF1-206ENST00000475605 GNPATO15228 680 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms