RNA–Protein interactions for RNA: ENST00000475463.6

PCNX2-209, Transcript of pecanex 2, humanhuman

TSL 1 (best)

Gene PCNX2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-209ENST00000475463 IP6K1Q92551 441 aa16.75■□□□□ 0.27
PCNX2-209ENST00000475463 ZBTB47Q9UFB7 747 aaPredicted RBP16.75■□□□□ 0.27
PCNX2-209ENST00000475463 LRRC37A3O60309 1634 aa16.74■□□□□ 0.27
PCNX2-209ENST00000475463 PROSER2Q86WR7 435 aaPredicted RBP16.74■□□□□ 0.27
PCNX2-209ENST00000475463 RTF1Q92541 710 aaKnown RBP16.74■□□□□ 0.27
PCNX2-209ENST00000475463 LTV1Q96GA3 475 aaPredicted RBP16.74■□□□□ 0.27
PCNX2-209ENST00000475463 PHRF1Q9P1Y6 1649 aaKnown RBP16.74■□□□□ 0.27
PCNX2-209ENST00000475463 HTATSF1O43719 755 aaKnown RBP16.74■□□□□ 0.27
PCNX2-209ENST00000475463 SMC5Q8IY18 1101 aa16.74■□□□□ 0.27
PCNX2-209ENST00000475463 API5Q9BZZ5 524 aaKnown RBP16.73■□□□□ 0.27
PCNX2-209ENST00000475463 MIS18AQ9NYP9 233 aa16.73■□□□□ 0.27
PCNX2-209ENST00000475463 TRPM3Q9HCF6 1732 aaPredicted RBP16.72■□□□□ 0.27
PCNX2-209ENST00000475463 KCNH5Q8NCM2 988 aa16.72■□□□□ 0.27
PCNX2-209ENST00000475463 HAP1P54257 671 aaPredicted RBP16.72■□□□□ 0.27
PCNX2-209ENST00000475463 SLIT3O75094 1523 aa16.71■□□□□ 0.27
PCNX2-209ENST00000475463 C1orf167Q5SNV9 1468 aa16.71■□□□□ 0.27
PCNX2-209ENST00000475463 MSH6P52701 1360 aa16.71■□□□□ 0.27
PCNX2-209ENST00000475463 XPCQ01831 940 aaPredicted RBP16.71■□□□□ 0.27
PCNX2-209ENST00000475463 RGS12O14924 1447 aa16.71■□□□□ 0.26
PCNX2-209ENST00000475463 STRCP1A6NGW2 1772 aa16.7■□□□□ 0.26
PCNX2-209ENST00000475463 GNAT3A8MTJ3 354 aa16.7■□□□□ 0.26
PCNX2-209ENST00000475463 USHBP1Q8N6Y0 703 aa16.7■□□□□ 0.26
PCNX2-209ENST00000475463 CHMP4BQ9H444 224 aaKnown RBP16.7■□□□□ 0.26
PCNX2-209ENST00000475463 C19orf44Q9H6X5 657 aa16.7■□□□□ 0.26
PCNX2-209ENST00000475463 TSPYL4Q9UJ04 414 aa16.7■□□□□ 0.26
PCNX2-209ENST00000475463 RGPD2P0DJD1 1756 aa16.7■□□□□ 0.26
PCNX2-209ENST00000475463 KIF1AQ12756 1690 aa16.7■□□□□ 0.26
PCNX2-209ENST00000475463 NBPF6Q5VWK0 638 aa16.69■□□□□ 0.26
PCNX2-209ENST00000475463 NBPF4Q96M43 638 aa16.69■□□□□ 0.26
PCNX2-209ENST00000475463 IL17REQ8NFR9 667 aa16.68■□□□□ 0.26
PCNX2-209ENST00000475463 MAP3K5Q99683 1374 aa16.68■□□□□ 0.26
PCNX2-209ENST00000475463 GCP02774 474 aa16.68■□□□□ 0.26
PCNX2-209ENST00000475463 INTS3Q68E01 1043 aaKnown RBP16.68■□□□□ 0.26
PCNX2-209ENST00000475463 USP19O94966 1318 aa16.67■□□□□ 0.26
PCNX2-209ENST00000475463 SEC24BO95487 1268 aa16.67■□□□□ 0.26
PCNX2-209ENST00000475463 KRT28Q7Z3Y7 464 aa16.67■□□□□ 0.26
PCNX2-209ENST00000475463 ARHGEF25Q86VW2 580 aa16.67■□□□□ 0.26
PCNX2-209ENST00000475463 C1orf115Q9H7X2 142 aa16.67■□□□□ 0.26
PCNX2-209ENST00000475463 DDRGK1Q96HY6 314 aa16.67■□□□□ 0.26
PCNX2-209ENST00000475463 SIRT2Q8IXJ6 389 aa16.66■□□□□ 0.26
PCNX2-209ENST00000475463 MST1RQ04912 1400 aa16.66■□□□□ 0.26
PCNX2-209ENST00000475463 PTPRCP08575 1304 aa16.66■□□□□ 0.26
PCNX2-209ENST00000475463 NUCB1Q02818 461 aa16.65■□□□□ 0.26
PCNX2-209ENST00000475463 TMEM94Q12767 1356 aa16.65■□□□□ 0.26
PCNX2-209ENST00000475463 ZBTB7CA1YPR0 619 aa16.64■□□□□ 0.25
PCNX2-209ENST00000475463 SLC4A2P04920 1241 aa16.64■□□□□ 0.25
PCNX2-209ENST00000475463 ALS2Q96Q42 1657 aa16.64■□□□□ 0.25
PCNX2-209ENST00000475463 LRRC59Q96AG4 307 aaKnown RBP16.64■□□□□ 0.25
PCNX2-209ENST00000475463 BABAM1Q9NWV8 329 aa16.64■□□□□ 0.25
PCNX2-209ENST00000475463 NCAPD2Q15021 1401 aa16.63■□□□□ 0.25
PCNX2-209ENST00000475463 MYT1Q01538 1121 aa16.63■□□□□ 0.25
PCNX2-209ENST00000475463 TAF7Q15545 349 aaPredicted RBP16.63■□□□□ 0.25
PCNX2-209ENST00000475463 NCOA3Q9Y6Q9 1424 aa16.63■□□□□ 0.25
PCNX2-209ENST00000475463 LMOD2Q6P5Q4 547 aa16.62■□□□□ 0.25
PCNX2-209ENST00000475463 GCC1Q96CN9 775 aa16.62■□□□□ 0.25
PCNX2-209ENST00000475463 CEMIPQ8WUJ3 1361 aa16.62■□□□□ 0.25
PCNX2-209ENST00000475463 G2E3Q7L622 706 aa16.62■□□□□ 0.25
PCNX2-209ENST00000475463 DCCP43146 1447 aa16.62■□□□□ 0.25
PCNX2-209ENST00000475463 CHD1LQ86WJ1 897 aa16.61■□□□□ 0.25
PCNX2-209ENST00000475463 CACNA1FO60840 1977 aa16.61■□□□□ 0.25
PCNX2-209ENST00000475463 MED1Q15648 1581 aaPredicted RBP16.61■□□□□ 0.25
PCNX2-209ENST00000475463 FAM208AQ9UK61 1670 aaKnown RBP16.61■□□□□ 0.25
PCNX2-209ENST00000475463 CAMTA1Q9Y6Y1 1673 aa16.61■□□□□ 0.25
PCNX2-209ENST00000475463 PLEKHG5O94827 1062 aa16.61■□□□□ 0.25
PCNX2-209ENST00000475463 ATF3P18847 181 aa16.61■□□□□ 0.25
PCNX2-209ENST00000475463 LMO7Q8WWI1 1683 aa16.6■□□□□ 0.25
PCNX2-209ENST00000475463 RGPD5Q99666 1765 aa16.6■□□□□ 0.25
PCNX2-209ENST00000475463 LNPKQ9C0E8 428 aa16.6■□□□□ 0.25
PCNX2-209ENST00000475463 AXIN2Q9Y2T1 843 aa16.6■□□□□ 0.25
PCNX2-209ENST00000475463 HSPA2P54652 639 aa16.6■□□□□ 0.25
PCNX2-209ENST00000475463 ANKRD24Q8TF21 1146 aa16.6■□□□□ 0.25
PCNX2-209ENST00000475463 SOS1Q07889 1333 aaPredicted RBP16.59■□□□□ 0.25
PCNX2-209ENST00000475463 ATP10DQ9P241 1426 aa16.58■□□□□ 0.25
PCNX2-209ENST00000475463 LGR6Q9HBX8 967 aa16.58■□□□□ 0.25
PCNX2-209ENST00000475463 ANKRD45Q5TZF3 282 aa16.57■□□□□ 0.24
PCNX2-209ENST00000475463 CCDC30Q5VVM6 783 aa16.57■□□□□ 0.24
PCNX2-209ENST00000475463 DDX17Q92841 729 aaKnown RBP16.57■□□□□ 0.24
PCNX2-209ENST00000475463 KDM3BQ7LBC6 1761 aa16.57■□□□□ 0.24
PCNX2-209ENST00000475463 PLEKHO1Q53GL0 409 aaPredicted RBP16.57■□□□□ 0.24
PCNX2-209ENST00000475463 AKAP4Q5JQC9 854 aa16.57■□□□□ 0.24
PCNX2-209ENST00000475463 ANKRD44Q8N8A2 993 aa16.57■□□□□ 0.24
PCNX2-209ENST00000475463 STK31Q9BXU1 1019 aa16.57■□□□□ 0.24
PCNX2-209ENST00000475463 XIRP1Q702N8 1843 aaKnown RBP16.57■□□□□ 0.24
PCNX2-209ENST00000475463 F6X3S4 739 aa16.56■□□□□ 0.24
PCNX2-209ENST00000475463 SLC4A3P48751 1232 aa16.56■□□□□ 0.24
PCNX2-209ENST00000475463 MEIS3Q99687 375 aa16.56■□□□□ 0.24
PCNX2-209ENST00000475463 AMOTQ4VCS5 1084 aa16.55■□□□□ 0.24
PCNX2-209ENST00000475463 ZNF530Q6P9A1 599 aaPredicted RBP16.55■□□□□ 0.24
PCNX2-209ENST00000475463 DCTPP1Q9H773 170 aa16.55■□□□□ 0.24
PCNX2-209ENST00000475463 PXDNQ92626 1479 aa16.55■□□□□ 0.24
PCNX2-209ENST00000475463 CEP85Q6P2H3 762 aa16.55■□□□□ 0.24
PCNX2-209ENST00000475463 CADPS2Q86UW7 1296 aa16.55■□□□□ 0.24
PCNX2-209ENST00000475463 RPAP2Q8IXW5 612 aaPredicted RBP16.55■□□□□ 0.24
PCNX2-209ENST00000475463 ZC3H6P61129 1189 aaKnown RBP16.54■□□□□ 0.24
PCNX2-209ENST00000475463 FLIIQ13045 1269 aa16.54■□□□□ 0.24
PCNX2-209ENST00000475463 TBC1D32Q96NH3 1257 aa16.54■□□□□ 0.24
PCNX2-209ENST00000475463 CCT4P50991 539 aaKnown RBP16.54■□□□□ 0.24
PCNX2-209ENST00000475463 NECTIN2Q92692 538 aa16.54■□□□□ 0.24
PCNX2-209ENST00000475463 COL18A1P39060 1754 aa16.54■□□□□ 0.24
PCNX2-209ENST00000475463 ERBB3P21860 1342 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms