RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 GRIN3BO60391 1043 aa25.63■■□□□ 1.69
RNF220-212ENST00000475378 SYTL4Q96C24 671 aaPredicted RBP25.62■■□□□ 1.69
RNF220-212ENST00000475378 HDGFL2Q7Z4V5 671 aaPredicted RBP25.61■■□□□ 1.69
RNF220-212ENST00000475378 SIN3AQ96ST3 1273 aa25.61■■□□□ 1.69
RNF220-212ENST00000475378 SLC12A5Q9H2X9 1139 aa25.61■■□□□ 1.69
RNF220-212ENST00000475378 A0A1W2PP64 1363 aa25.6■■□□□ 1.69
RNF220-212ENST00000475378 ATP10DQ9P241 1426 aa25.6■■□□□ 1.69
RNF220-212ENST00000475378 C5P01031 1676 aa25.59■■□□□ 1.69
RNF220-212ENST00000475378 COL23A1Q86Y22 540 aaPredicted RBP25.59■■□□□ 1.69
RNF220-212ENST00000475378 TMC1Q8TDI8 760 aa25.59■■□□□ 1.69
RNF220-212ENST00000475378 TAF1LQ8IZX4 1826 aa25.58■■□□□ 1.69
RNF220-212ENST00000475378 LTV1Q96GA3 475 aaPredicted RBP25.58■■□□□ 1.69
RNF220-212ENST00000475378 CCNL1Q9UK58 526 aaPredicted RBP25.58■■□□□ 1.69
RNF220-212ENST00000475378 MEGF6O75095 1541 aa25.58■■□□□ 1.68
RNF220-212ENST00000475378 ZCRB1Q8TBF4 217 aaKnown RBP25.55■■□□□ 1.68
RNF220-212ENST00000475378 ADCY9O60503 1353 aa25.54■■□□□ 1.68
RNF220-212ENST00000475378 HOXC9P31274 260 aa25.53■■□□□ 1.68
RNF220-212ENST00000475378 TERF2IPQ9NYB0 399 aa25.53■■□□□ 1.68
RNF220-212ENST00000475378 MAP3K19Q56UN5 1328 aa25.53■■□□□ 1.68
RNF220-212ENST00000475378 MSH5O43196 834 aa25.52■■□□□ 1.68
RNF220-212ENST00000475378 MSL1Q68DK7 614 aa25.52■■□□□ 1.68
RNF220-212ENST00000475378 USP47Q96K76 1375 aa25.52■■□□□ 1.68
RNF220-212ENST00000475378 PUS7Q96PZ0 661 aaKnown RBP25.5■■□□□ 1.67
RNF220-212ENST00000475378 CD2APQ9Y5K6 639 aa25.5■■□□□ 1.67
RNF220-212ENST00000475378 NEUROD1Q13562 356 aa25.49■■□□□ 1.67
RNF220-212ENST00000475378 FBLN1P23142 703 aa25.48■■□□□ 1.67
RNF220-212ENST00000475378 CARD11Q9BXL7 1154 aa25.48■■□□□ 1.67
RNF220-212ENST00000475378 GPBP1L1Q9HC44 474 aaPredicted RBP25.48■■□□□ 1.67
RNF220-212ENST00000475378 TOGARAM1Q9Y4F4 1720 aa25.48■■□□□ 1.67
RNF220-212ENST00000475378 HSPA6P17066 643 aa25.46■■□□□ 1.67
RNF220-212ENST00000475378 AMPHP49418 695 aa25.46■■□□□ 1.67
RNF220-212ENST00000475378 UBR3Q6ZT12 1888 aa25.46■■□□□ 1.67
RNF220-212ENST00000475378 ITGB4P16144 1822 aa25.46■■□□□ 1.67
RNF220-212ENST00000475378 C4BP0C0L5 1744 aa25.45■■□□□ 1.66
RNF220-212ENST00000475378 NBPF6Q5VWK0 638 aa25.44■■□□□ 1.66
RNF220-212ENST00000475378 COG3Q96JB2 828 aa25.44■■□□□ 1.66
RNF220-212ENST00000475378 NBPF4Q96M43 638 aa25.44■■□□□ 1.66
RNF220-212ENST00000475378 RTL1A6NKG5 1358 aa25.44■■□□□ 1.66
RNF220-212ENST00000475378 CGNL1Q0VF96 1302 aa25.43■■□□□ 1.66
RNF220-212ENST00000475378 FLAD1Q8NFF5 587 aa25.42■■□□□ 1.66
RNF220-212ENST00000475378 PALLDQ8WX93 1383 aa25.41■■□□□ 1.66
RNF220-212ENST00000475378 AMIGO3Q86WK7 504 aa25.39■■□□□ 1.66
RNF220-212ENST00000475378 USHBP1Q8N6Y0 703 aa25.39■■□□□ 1.66
RNF220-212ENST00000475378 ZNF526Q8TF50 670 aaPredicted RBP25.39■■□□□ 1.66
RNF220-212ENST00000475378 MAP2P11137 1827 aaKnown RBP25.38■■□□□ 1.65
RNF220-212ENST00000475378 HMGB2P26583 209 aaKnown RBP25.38■■□□□ 1.65
RNF220-212ENST00000475378 RRS1Q15050 365 aaKnown RBP25.37■■□□□ 1.65
RNF220-212ENST00000475378 IGSF1Q8N6C5 1336 aa25.37■■□□□ 1.65
RNF220-212ENST00000475378 RAPGEF4Q8WZA2 1011 aa25.36■■□□□ 1.65
RNF220-212ENST00000475378 TESK2Q96S53 571 aa25.36■■□□□ 1.65
RNF220-212ENST00000475378 CICQ96RK0 1608 aaPredicted RBP25.36■■□□□ 1.65
RNF220-212ENST00000475378 PCDH11XQ9BZA7 1347 aa25.36■■□□□ 1.65
RNF220-212ENST00000475378 PCDH11YQ9BZA8 1340 aa25.36■■□□□ 1.65
RNF220-212ENST00000475378 PKD1L3Q7Z443 1732 aa25.35■■□□□ 1.65
RNF220-212ENST00000475378 KIF3CO14782 793 aa25.34■■□□□ 1.65
RNF220-212ENST00000475378 TATP17735 454 aaPredicted RBP25.34■■□□□ 1.65
RNF220-212ENST00000475378 MPRIPQ6WCQ1 1025 aa25.33■■□□□ 1.65
RNF220-212ENST00000475378 SMG6Q86US8 1419 aaKnown RBP25.33■■□□□ 1.65
RNF220-212ENST00000475378 KIF13BQ9NQT8 1826 aa25.32■■□□□ 1.64
RNF220-212ENST00000475378 CYP27B1O15528 508 aa25.31■■□□□ 1.64
RNF220-212ENST00000475378 SMIM5Q71RC9 77 aa25.31■■□□□ 1.64
RNF220-212ENST00000475378 AK7Q96M32 723 aa25.31■■□□□ 1.64
RNF220-212ENST00000475378 WWC3Q9ULE0 1092 aa25.31■■□□□ 1.64
RNF220-212ENST00000475378 KIAA1551Q9HCM1 1747 aa25.31■■□□□ 1.64
RNF220-212ENST00000475378 FYB1O15117 783 aa25.3■■□□□ 1.64
RNF220-212ENST00000475378 KIF20BQ96Q89 1820 aa25.3■■□□□ 1.64
RNF220-212ENST00000475378 INSRP06213 1382 aa25.3■■□□□ 1.64
RNF220-212ENST00000475378 NSD3Q9BZ95 1437 aa25.29■■□□□ 1.64
RNF220-212ENST00000475378 SMARCC1Q92922 1105 aaPredicted RBP25.29■■□□□ 1.64
RNF220-212ENST00000475378 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.28■■□□□ 1.64
RNF220-212ENST00000475378 PHF14O94880 888 aa25.28■■□□□ 1.64
RNF220-212ENST00000475378 HSP90AB2PQ58FF8 381 aa25.28■■□□□ 1.64
RNF220-212ENST00000475378 GGNBP2Q9H3C7 697 aa25.27■■□□□ 1.64
RNF220-212ENST00000475378 ST20-MTHFSA0A0A6YYL1 179 aa25.26■■□□□ 1.63
RNF220-212ENST00000475378 SSFA2P28290 1259 aa25.26■■□□□ 1.63
RNF220-212ENST00000475378 PIGBQ92521 554 aa25.26■■□□□ 1.63
RNF220-212ENST00000475378 N4BP2Q86UW6 1770 aaPredicted RBP25.26■■□□□ 1.63
RNF220-212ENST00000475378 FLT4P35916 1363 aa25.25■■□□□ 1.63
RNF220-212ENST00000475378 KIF24Q5T7B8 1368 aa25.25■■□□□ 1.63
RNF220-212ENST00000475378 NCAPD2Q15021 1401 aa25.24■■□□□ 1.63
RNF220-212ENST00000475378 LINC00116Q8NCU8 138 aa25.24■■□□□ 1.63
RNF220-212ENST00000475378 NKX1-1Q15270 411 aaPredicted RBP25.23■■□□□ 1.63
RNF220-212ENST00000475378 PXDNLA1KZ92 1463 aa25.21■■□□□ 1.63
RNF220-212ENST00000475378 BRCA1P38398 1863 aaKnown RBP25.21■■□□□ 1.63
RNF220-212ENST00000475378 LOC102724428A0A0B4J2F2 783 aa25.21■■□□□ 1.63
RNF220-212ENST00000475378 APLP1P51693 650 aa25.21■■□□□ 1.63
RNF220-212ENST00000475378 SIK1P57059 783 aa25.21■■□□□ 1.63
RNF220-212ENST00000475378 SLC24A1O60721 1099 aa25.2■■□□□ 1.62
RNF220-212ENST00000475378 DNAJC5GQ8N7S2 189 aa25.2■■□□□ 1.62
RNF220-212ENST00000475378 ANKRD26Q9UPS8 1709 aa25.2■■□□□ 1.62
RNF220-212ENST00000475378 ITPK1Q13572 414 aa25.18■■□□□ 1.62
RNF220-212ENST00000475378 TONSLQ96HA7 1378 aa25.18■■□□□ 1.62
RNF220-212ENST00000475378 WDR90Q96KV7 1748 aa25.17■■□□□ 1.62
RNF220-212ENST00000475378 TOMM70O94826 608 aa25.17■■□□□ 1.62
RNF220-212ENST00000475378 GNPATO15228 680 aa25.16■■□□□ 1.62
RNF220-212ENST00000475378 MMP10P09238 476 aa25.15■■□□□ 1.62
RNF220-212ENST00000475378 ASAP1Q9ULH1 1129 aa25.14■■□□□ 1.62
RNF220-212ENST00000475378 ARFGEF1Q9Y6D6 1849 aa25.14■■□□□ 1.61
RNF220-212ENST00000475378 ZNF831Q5JPB2 1677 aa25.13■■□□□ 1.61
RNF220-212ENST00000475378 C10orf71Q711Q0 1435 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms