RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 RGPD2P0DJD1 1756 aa25.08■■□□□ 1.6
PCGF3-209ENST00000475288 ZCRB1Q8TBF4 217 aaKnown RBP25.07■■□□□ 1.6
PCGF3-209ENST00000475288 CGNL1Q0VF96 1302 aa25.07■■□□□ 1.6
PCGF3-209ENST00000475288 MEGF6O75095 1541 aa25.07■■□□□ 1.6
PCGF3-209ENST00000475288 TUBGCP6Q96RT7 1819 aa25.05■■□□□ 1.6
PCGF3-209ENST00000475288 PRIM1P49642 420 aaKnown RBP25.05■■□□□ 1.6
PCGF3-209ENST00000475288 ZNF784Q8NCA9 323 aaPredicted RBP25.05■■□□□ 1.6
PCGF3-209ENST00000475288 PNPLA7Q6ZV29 1317 aa25.04■■□□□ 1.6
PCGF3-209ENST00000475288 FYB1O15117 783 aa25.02■■□□□ 1.6
PCGF3-209ENST00000475288 SYTL4Q96C24 671 aaPredicted RBP25.02■■□□□ 1.6
PCGF3-209ENST00000475288 KIF24Q5T7B8 1368 aa25.02■■□□□ 1.6
PCGF3-209ENST00000475288 SMG6Q86US8 1419 aaKnown RBP25.02■■□□□ 1.6
PCGF3-209ENST00000475288 FBLN1P23142 703 aa25.01■■□□□ 1.59
PCGF3-209ENST00000475288 POLD1P28340 1107 aa25.01■■□□□ 1.59
PCGF3-209ENST00000475288 TMF1P82094 1093 aa25.01■■□□□ 1.59
PCGF3-209ENST00000475288 TFCP2L1Q9NZI6 479 aa25■■□□□ 1.59
PCGF3-209ENST00000475288 NBPF6Q5VWK0 638 aa24.99■■□□□ 1.59
PCGF3-209ENST00000475288 NBPF4Q96M43 638 aa24.99■■□□□ 1.59
PCGF3-209ENST00000475288 GOLGB1Q14789 3259 aaKnown RBP24.99■■□□□ 1.59
PCGF3-209ENST00000475288 INSRP06213 1382 aa24.98■■□□□ 1.59
PCGF3-209ENST00000475288 USP47Q96K76 1375 aa24.98■■□□□ 1.59
PCGF3-209ENST00000475288 HMGB2P26583 209 aaKnown RBP24.98■■□□□ 1.59
PCGF3-209ENST00000475288 RRS1Q15050 365 aaKnown RBP24.98■■□□□ 1.59
PCGF3-209ENST00000475288 KIF20BQ96Q89 1820 aa24.98■■□□□ 1.59
PCGF3-209ENST00000475288 CDCA8Q53HL2 280 aa24.96■■□□□ 1.59
PCGF3-209ENST00000475288 RAPGEF4Q8WZA2 1011 aa24.96■■□□□ 1.59
PCGF3-209ENST00000475288 CCNL1Q9UK58 526 aaPredicted RBP24.96■■□□□ 1.59
PCGF3-209ENST00000475288 FLT4P35916 1363 aa24.95■■□□□ 1.59
PCGF3-209ENST00000475288 GGNBP2Q9H3C7 697 aa24.95■■□□□ 1.58
PCGF3-209ENST00000475288 KCNQ4P56696 695 aa24.94■■□□□ 1.58
PCGF3-209ENST00000475288 PCDH11XQ9BZA7 1347 aa24.93■■□□□ 1.58
PCGF3-209ENST00000475288 PCDH11YQ9BZA8 1340 aa24.93■■□□□ 1.58
PCGF3-209ENST00000475288 GPR162Q16538 588 aa24.93■■□□□ 1.58
PCGF3-209ENST00000475288 C5P01031 1676 aa24.92■■□□□ 1.58
PCGF3-209ENST00000475288 TATP17735 454 aaPredicted RBP24.92■■□□□ 1.58
PCGF3-209ENST00000475288 HSP90AB2PQ58FF8 381 aa24.9■■□□□ 1.58
PCGF3-209ENST00000475288 USHBP1Q8N6Y0 703 aa24.9■■□□□ 1.58
PCGF3-209ENST00000475288 PKD1L3Q7Z443 1732 aa24.89■■□□□ 1.58
PCGF3-209ENST00000475288 NCAPD2Q15021 1401 aa24.89■■□□□ 1.58
PCGF3-209ENST00000475288 ANKRD26Q9UPS8 1709 aa24.89■■□□□ 1.57
PCGF3-209ENST00000475288 COL23A1Q86Y22 540 aaPredicted RBP24.88■■□□□ 1.57
PCGF3-209ENST00000475288 TAF1LQ8IZX4 1826 aa24.88■■□□□ 1.57
PCGF3-209ENST00000475288 KLHL34Q8N239 644 aa24.86■■□□□ 1.57
PCGF3-209ENST00000475288 FLAD1Q8NFF5 587 aa24.86■■□□□ 1.57
PCGF3-209ENST00000475288 NLGN2Q8NFZ4 835 aa24.86■■□□□ 1.57
PCGF3-209ENST00000475288 TOGARAM1Q9Y4F4 1720 aa24.86■■□□□ 1.57
PCGF3-209ENST00000475288 PALLDQ8WX93 1383 aa24.85■■□□□ 1.57
PCGF3-209ENST00000475288 C1QTNF8P60827 252 aa24.84■■□□□ 1.57
PCGF3-209ENST00000475288 ITGB4P16144 1822 aa24.84■■□□□ 1.57
PCGF3-209ENST00000475288 CYP27B1O15528 508 aa24.83■■□□□ 1.57
PCGF3-209ENST00000475288 CARD14Q9BXL6 1004 aa24.83■■□□□ 1.57
PCGF3-209ENST00000475288 GRIN3BO60391 1043 aa24.82■■□□□ 1.56
PCGF3-209ENST00000475288 C4BP0C0L5 1744 aa24.82■■□□□ 1.56
PCGF3-209ENST00000475288 SMARCC1Q92922 1105 aaPredicted RBP24.82■■□□□ 1.56
PCGF3-209ENST00000475288 NSD3Q9BZ95 1437 aa24.82■■□□□ 1.56
PCGF3-209ENST00000475288 MSH5O43196 834 aa24.81■■□□□ 1.56
PCGF3-209ENST00000475288 NKX1-1Q15270 411 aaPredicted RBP24.81■■□□□ 1.56
PCGF3-209ENST00000475288 MPRIPQ6WCQ1 1025 aa24.8■■□□□ 1.56
PCGF3-209ENST00000475288 EMILIN1Q9Y6C2 1016 aa24.8■■□□□ 1.56
PCGF3-209ENST00000475288 TIMELESSQ9UNS1 1208 aa24.79■■□□□ 1.56
PCGF3-209ENST00000475288 CD2APQ9Y5K6 639 aa24.79■■□□□ 1.56
PCGF3-209ENST00000475288 PLEKHG2Q9H7P9 1386 aa24.79■■□□□ 1.56
PCGF3-209ENST00000475288 PELP1Q8IZL8 1130 aaKnown RBP24.78■■□□□ 1.56
PCGF3-209ENST00000475288 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.78■■□□□ 1.56
PCGF3-209ENST00000475288 WASHC2AQ641Q2 1341 aa24.78■■□□□ 1.56
PCGF3-209ENST00000475288 YBX3P16989 372 aaKnown RBP eCLIP24.77■■□□□ 1.56
PCGF3-209ENST00000475288 MAP2P11137 1827 aaKnown RBP24.77■■□□□ 1.56
PCGF3-209ENST00000475288 UBR3Q6ZT12 1888 aa24.77■■□□□ 1.56
PCGF3-209ENST00000475288 TRIM26Q12899 539 aaPredicted RBP24.76■■□□□ 1.55
PCGF3-209ENST00000475288 SPG7Q9UQ90 795 aa24.76■■□□□ 1.55
PCGF3-209ENST00000475288 MSL1Q68DK7 614 aa24.75■■□□□ 1.55
PCGF3-209ENST00000475288 SENP3-EIF4A1A0A087X0R7 540 aa24.74■■□□□ 1.55
PCGF3-209ENST00000475288 GIGYF1O75420 1035 aaPredicted RBP24.74■■□□□ 1.55
PCGF3-209ENST00000475288 PIGBQ92521 554 aa24.74■■□□□ 1.55
PCGF3-209ENST00000475288 AK7Q96M32 723 aa24.73■■□□□ 1.55
PCGF3-209ENST00000475288 EYA1Q99502 592 aa24.71■■□□□ 1.55
PCGF3-209ENST00000475288 SSFA2P28290 1259 aa24.7■■□□□ 1.54
PCGF3-209ENST00000475288 LOC102724428A0A0B4J2F2 783 aa24.69■■□□□ 1.54
PCGF3-209ENST00000475288 PPM1GO15355 546 aaPredicted RBP24.69■■□□□ 1.54
PCGF3-209ENST00000475288 SIK1P57059 783 aa24.69■■□□□ 1.54
PCGF3-209ENST00000475288 POLKQ9UBT6 870 aa24.69■■□□□ 1.54
PCGF3-209ENST00000475288 CLSPNQ9HAW4 1339 aa24.68■■□□□ 1.54
PCGF3-209ENST00000475288 AMIGO3Q86WK7 504 aa24.68■■□□□ 1.54
PCGF3-209ENST00000475288 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.67■■□□□ 1.54
PCGF3-209ENST00000475288 IFNL2Q8IZJ0 200 aa24.67■■□□□ 1.54
PCGF3-209ENST00000475288 TMOD3Q9NYL9 352 aa24.67■■□□□ 1.54
PCGF3-209ENST00000475288 ZNF831Q5JPB2 1677 aa24.66■■□□□ 1.54
PCGF3-209ENST00000475288 PHKG2P15735 406 aa24.66■■□□□ 1.54
PCGF3-209ENST00000475288 LINC00116Q8NCU8 138 aa24.65■■□□□ 1.54
PCGF3-209ENST00000475288 ADCY9O60503 1353 aa24.65■■□□□ 1.54
PCGF3-209ENST00000475288 ATP10DQ9P241 1426 aa24.63■■□□□ 1.53
PCGF3-209ENST00000475288 CEP350Q5VT06 3117 aa24.63■■□□□ 1.53
PCGF3-209ENST00000475288 PHF14O94880 888 aa24.62■■□□□ 1.53
PCGF3-209ENST00000475288 EIF4A2Q14240 407 aaKnown RBP24.62■■□□□ 1.53
PCGF3-209ENST00000475288 ASAP1Q9ULH1 1129 aa24.62■■□□□ 1.53
PCGF3-209ENST00000475288 ITPK1Q13572 414 aa24.61■■□□□ 1.53
PCGF3-209ENST00000475288 KDRP35968 1356 aa24.61■■□□□ 1.53
PCGF3-209ENST00000475288 IGSF1Q8N6C5 1336 aa24.61■■□□□ 1.53
PCGF3-209ENST00000475288 GNPATO15228 680 aa24.59■■□□□ 1.53
PCGF3-209ENST00000475288 ATP6V1AP38606 617 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms