RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 BRPF1P55201 1214 aaPredicted RBP23.39■■□□□ 1.33
SEC61A2-213ENST00000475268 ITPRIPQ8IWB1 547 aa23.38■■□□□ 1.33
SEC61A2-213ENST00000475268 MRPL50Q8N5N7 158 aaKnown RBP23.38■■□□□ 1.33
SEC61A2-213ENST00000475268 CRB1P82279 1406 aa23.38■■□□□ 1.33
SEC61A2-213ENST00000475268 USP19O94966 1318 aa23.38■■□□□ 1.33
SEC61A2-213ENST00000475268 ARHGEF25Q86VW2 580 aa23.38■■□□□ 1.33
SEC61A2-213ENST00000475268 NBPF6Q5VWK0 638 aa23.37■■□□□ 1.33
SEC61A2-213ENST00000475268 NBPF4Q96M43 638 aa23.37■■□□□ 1.33
SEC61A2-213ENST00000475268 PCDHB15Q9Y5E8 787 aa23.37■■□□□ 1.33
SEC61A2-213ENST00000475268 STRCQ7RTU9 1775 aa23.37■■□□□ 1.33
SEC61A2-213ENST00000475268 TMEM57Q8N5G2 664 aa23.36■■□□□ 1.33
SEC61A2-213ENST00000475268 PHRF1Q9P1Y6 1649 aaKnown RBP23.36■■□□□ 1.33
SEC61A2-213ENST00000475268 MIS18AQ9NYP9 233 aa23.35■■□□□ 1.33
SEC61A2-213ENST00000475268 DDX19BQ9UMR2 479 aa23.35■■□□□ 1.33
SEC61A2-213ENST00000475268 GNAT3A8MTJ3 354 aa23.35■■□□□ 1.33
SEC61A2-213ENST00000475268 KRT24Q2M2I5 525 aa23.34■■□□□ 1.33
SEC61A2-213ENST00000475268 HTATSF1O43719 755 aaKnown RBP23.34■■□□□ 1.33
SEC61A2-213ENST00000475268 LRRC59Q96AG4 307 aaKnown RBP23.33■■□□□ 1.33
SEC61A2-213ENST00000475268 NPHP3Q7Z494 1330 aa23.33■■□□□ 1.32
SEC61A2-213ENST00000475268 ALS2Q96Q42 1657 aa23.32■■□□□ 1.32
SEC61A2-213ENST00000475268 TSPYL4Q9UJ04 414 aa23.32■■□□□ 1.32
SEC61A2-213ENST00000475268 ARHGAP45Q92619 1136 aa23.31■■□□□ 1.32
SEC61A2-213ENST00000475268 KIAA0232Q92628 1395 aa23.31■■□□□ 1.32
SEC61A2-213ENST00000475268 MAP3K5Q99683 1374 aa23.31■■□□□ 1.32
SEC61A2-213ENST00000475268 HAP1P54257 671 aaPredicted RBP23.31■■□□□ 1.32
SEC61A2-213ENST00000475268 ZNF335Q9H4Z2 1342 aaPredicted RBP23.3■■□□□ 1.32
SEC61A2-213ENST00000475268 PDE4AP27815 886 aa23.3■■□□□ 1.32
SEC61A2-213ENST00000475268 ZC3H6P61129 1189 aaKnown RBP23.3■■□□□ 1.32
SEC61A2-213ENST00000475268 ANKRD24Q8TF21 1146 aa23.3■■□□□ 1.32
SEC61A2-213ENST00000475268 XIRP1Q702N8 1843 aaKnown RBP23.3■■□□□ 1.32
SEC61A2-213ENST00000475268 RGS3P49796 1198 aa23.29■■□□□ 1.32
SEC61A2-213ENST00000475268 RWDD1Q9H446 243 aaPredicted RBP23.29■■□□□ 1.32
SEC61A2-213ENST00000475268 AXIN2Q9Y2T1 843 aa23.29■■□□□ 1.32
SEC61A2-213ENST00000475268 RGPD2P0DJD1 1756 aa23.28■■□□□ 1.32
SEC61A2-213ENST00000475268 MED1Q15648 1581 aaPredicted RBP23.28■■□□□ 1.32
SEC61A2-213ENST00000475268 IL17REQ8NFR9 667 aa23.28■■□□□ 1.32
SEC61A2-213ENST00000475268 BACH2Q9BYV9 841 aa23.26■■□□□ 1.31
SEC61A2-213ENST00000475268 ZBTB40Q9NUA8 1239 aa23.25■■□□□ 1.31
SEC61A2-213ENST00000475268 TNS3Q68CZ2 1445 aa23.25■■□□□ 1.31
SEC61A2-213ENST00000475268 LRRC37A3O60309 1634 aa23.25■■□□□ 1.31
SEC61A2-213ENST00000475268 BRINP3Q76B58 766 aa23.24■■□□□ 1.31
SEC61A2-213ENST00000475268 CABLES1Q8TDN4 633 aa23.24■■□□□ 1.31
SEC61A2-213ENST00000475268 API5Q9BZZ5 524 aaKnown RBP23.24■■□□□ 1.31
SEC61A2-213ENST00000475268 PXDNQ92626 1479 aa23.23■■□□□ 1.31
SEC61A2-213ENST00000475268 ABCC4O15439 1325 aa23.23■■□□□ 1.31
SEC61A2-213ENST00000475268 TAF7Q15545 349 aaPredicted RBP23.22■■□□□ 1.31
SEC61A2-213ENST00000475268 SPATA31A3Q5VYP0 1347 aa23.22■■□□□ 1.31
SEC61A2-213ENST00000475268 PLEKHO1Q53GL0 409 aaPredicted RBP23.21■■□□□ 1.31
SEC61A2-213ENST00000475268 SLAIN2Q9P270 581 aa23.21■■□□□ 1.31
SEC61A2-213ENST00000475268 ZNF530Q6P9A1 599 aaPredicted RBP23.2■■□□□ 1.3
SEC61A2-213ENST00000475268 ERBB3P21860 1342 aa23.2■■□□□ 1.3
SEC61A2-213ENST00000475268 NCAPD2Q15021 1401 aa23.2■■□□□ 1.3
SEC61A2-213ENST00000475268 RGPD5Q99666 1765 aa23.2■■□□□ 1.3
SEC61A2-213ENST00000475268 ZBTB7BO15156 539 aaPredicted RBP23.2■■□□□ 1.3
SEC61A2-213ENST00000475268 HDAC1Q13547 482 aaPredicted RBP23.19■■□□□ 1.3
SEC61A2-213ENST00000475268 AMOTQ4VCS5 1084 aa23.19■■□□□ 1.3
SEC61A2-213ENST00000475268 CHMP4BQ9H444 224 aaKnown RBP23.19■■□□□ 1.3
SEC61A2-213ENST00000475268 SLC4A2P04920 1241 aa23.18■■□□□ 1.3
SEC61A2-213ENST00000475268 LGR6Q9HBX8 967 aa23.18■■□□□ 1.3
SEC61A2-213ENST00000475268 BABAM1Q9NWV8 329 aa23.18■■□□□ 1.3
SEC61A2-213ENST00000475268 AKAP4Q5JQC9 854 aa23.17■■□□□ 1.3
SEC61A2-213ENST00000475268 PDZRN3Q9UPQ7 1066 aa23.17■■□□□ 1.3
SEC61A2-213ENST00000475268 CEMIPQ8WUJ3 1361 aa23.17■■□□□ 1.3
SEC61A2-213ENST00000475268 CHRNA2Q15822 529 aa23.16■■□□□ 1.3
SEC61A2-213ENST00000475268 NLRP2Q9NX02 1062 aa23.16■■□□□ 1.3
SEC61A2-213ENST00000475268 PTPRCP08575 1304 aa23.15■■□□□ 1.3
SEC61A2-213ENST00000475268 CAMTA1Q9Y6Y1 1673 aa23.15■■□□□ 1.3
SEC61A2-213ENST00000475268 FAM161AQ3B820 660 aa23.15■■□□□ 1.3
SEC61A2-213ENST00000475268 C1orf141Q5JVX7 400 aa23.15■■□□□ 1.3
SEC61A2-213ENST00000475268 MPRIPQ6WCQ1 1025 aa23.15■■□□□ 1.3
SEC61A2-213ENST00000475268 C1orf115Q9H7X2 142 aa23.14■■□□□ 1.29
SEC61A2-213ENST00000475268 ANP32AP39687 249 aaKnown RBP23.13■■□□□ 1.29
SEC61A2-213ENST00000475268 RGS12O14924 1447 aa23.13■■□□□ 1.29
SEC61A2-213ENST00000475268 LMO7Q8WWI1 1683 aa23.13■■□□□ 1.29
SEC61A2-213ENST00000475268 CSB-PGBD3P0DP91 1061 aa23.13■■□□□ 1.29
SEC61A2-213ENST00000475268 STK31Q9BXU1 1019 aa23.13■■□□□ 1.29
SEC61A2-213ENST00000475268 TEFQ10587 303 aa23.12■■□□□ 1.29
SEC61A2-213ENST00000475268 NPM2Q86SE8 214 aaKnown RBP23.12■■□□□ 1.29
SEC61A2-213ENST00000475268 C8orf34Q49A92 452 aa23.11■■□□□ 1.29
SEC61A2-213ENST00000475268 INTS3Q68E01 1043 aaKnown RBP23.11■■□□□ 1.29
SEC61A2-213ENST00000475268 NECTIN2Q92692 538 aa23.11■■□□□ 1.29
SEC61A2-213ENST00000475268 MSH5O43196 834 aa23.11■■□□□ 1.29
SEC61A2-213ENST00000475268 CCDC30Q5VVM6 783 aa23.11■■□□□ 1.29
SEC61A2-213ENST00000475268 G2E3Q7L622 706 aa23.11■■□□□ 1.29
SEC61A2-213ENST00000475268 SOS2Q07890 1332 aaPredicted RBP23.11■■□□□ 1.29
SEC61A2-213ENST00000475268 COL18A1P39060 1754 aa23.1■■□□□ 1.29
SEC61A2-213ENST00000475268 CRYBG1Q9Y4K1 1723 aa23.1■■□□□ 1.29
SEC61A2-213ENST00000475268 RAPGEF4Q8WZA2 1011 aa23.1■■□□□ 1.29
SEC61A2-213ENST00000475268 SOS1Q07889 1333 aaPredicted RBP23.09■■□□□ 1.29
SEC61A2-213ENST00000475268 RNMTO43148 476 aaKnown RBP23.09■■□□□ 1.29
SEC61A2-213ENST00000475268 SMC5Q8IY18 1101 aa23.09■■□□□ 1.29
SEC61A2-213ENST00000475268 CPDO75976 1380 aa23.09■■□□□ 1.29
SEC61A2-213ENST00000475268 BTBD11A6QL63 1104 aa23.08■■□□□ 1.29
SEC61A2-213ENST00000475268 TATP17735 454 aaPredicted RBP23.06■■□□□ 1.28
SEC61A2-213ENST00000475268 EIF4A1P60842 406 aaKnown RBP23.06■■□□□ 1.28
SEC61A2-213ENST00000475268 ABCC6O95255 1503 aa23.05■■□□□ 1.28
SEC61A2-213ENST00000475268 F6X3S4 739 aa23.05■■□□□ 1.28
SEC61A2-213ENST00000475268 KCNQ3O43525 872 aa23.05■■□□□ 1.28
SEC61A2-213ENST00000475268 HDGFL1Q5TGJ6 251 aa23.05■■□□□ 1.28
SEC61A2-213ENST00000475268 SLC4A10Q6U841 1118 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms