RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 ZNF853P0CG23 659 aa16.82■□□□□ 0.28
SEMA4D-217ENST00000475255 BRPF1P55201 1214 aaPredicted RBP16.82■□□□□ 0.28
SEMA4D-217ENST00000475255 CHMP4BQ9H444 224 aaKnown RBP16.82■□□□□ 0.28
SEMA4D-217ENST00000475255 UQCRHLA0A096LP55 91 aa16.82■□□□□ 0.28
SEMA4D-217ENST00000475255 UQCRHP07919 91 aa16.82■□□□□ 0.28
SEMA4D-217ENST00000475255 IL13P35225 146 aa16.82■□□□□ 0.28
SEMA4D-217ENST00000475255 CEP85Q6P2H3 762 aa16.82■□□□□ 0.28
SEMA4D-217ENST00000475255 CFAP44Q96MT7 982 aa16.82■□□□□ 0.28
SEMA4D-217ENST00000475255 F6X3S4 739 aa16.81■□□□□ 0.28
SEMA4D-217ENST00000475255 STAG3Q9UJ98 1225 aa16.81■□□□□ 0.28
SEMA4D-217ENST00000475255 YTHDC2Q9H6S0 1430 aaKnown RBP16.81■□□□□ 0.28
SEMA4D-217ENST00000475255 PIK3R4Q99570 1358 aa16.81■□□□□ 0.28
SEMA4D-217ENST00000475255 ZNF428Q96B54 188 aa16.81■□□□□ 0.28
SEMA4D-217ENST00000475255 NEXMIFQ5QGS0 1516 aa16.8■□□□□ 0.28
SEMA4D-217ENST00000475255 NOL7Q9UMY1 257 aaKnown RBP16.8■□□□□ 0.28
SEMA4D-217ENST00000475255 LMTK2Q8IWU2 1503 aa16.8■□□□□ 0.28
SEMA4D-217ENST00000475255 KNDC1Q76NI1 1749 aa16.8■□□□□ 0.28
SEMA4D-217ENST00000475255 ANKRD44Q8N8A2 993 aa16.8■□□□□ 0.28
SEMA4D-217ENST00000475255 EXOC6BQ9Y2D4 811 aa16.8■□□□□ 0.28
SEMA4D-217ENST00000475255 SIGLEC1Q9BZZ2 1709 aa16.79■□□□□ 0.28
SEMA4D-217ENST00000475255 TSC1Q92574 1164 aa16.79■□□□□ 0.28
SEMA4D-217ENST00000475255 ZNF830Q96NB3 372 aaPredicted RBP16.79■□□□□ 0.28
SEMA4D-217ENST00000475255 MSH6P52701 1360 aa16.79■□□□□ 0.28
SEMA4D-217ENST00000475255 PALD1Q9ULE6 856 aa16.79■□□□□ 0.28
SEMA4D-217ENST00000475255 FRMPD1Q5SYB0 1578 aa16.79■□□□□ 0.28
SEMA4D-217ENST00000475255 ABCC3O15438 1527 aa16.79■□□□□ 0.28
SEMA4D-217ENST00000475255 PTMAP06454 111 aaKnown RBP16.78■□□□□ 0.28
SEMA4D-217ENST00000475255 TMX3Q96JJ7 454 aa16.78■□□□□ 0.28
SEMA4D-217ENST00000475255 UPF3BQ9BZI7 483 aaKnown RBP16.78■□□□□ 0.28
SEMA4D-217ENST00000475255 PTPRMP28827 1452 aa16.78■□□□□ 0.28
SEMA4D-217ENST00000475255 CASC1Q6TDU7 716 aa16.78■□□□□ 0.28
SEMA4D-217ENST00000475255 IBTKQ9P2D0 1353 aaPredicted RBP16.78■□□□□ 0.28
SEMA4D-217ENST00000475255 NUTM2FA1L443 756 aa16.78■□□□□ 0.28
SEMA4D-217ENST00000475255 PDLIM2Q96JY6 352 aa16.77■□□□□ 0.28
SEMA4D-217ENST00000475255 LARP6Q9BRS8 491 aaKnown RBP16.77■□□□□ 0.28
SEMA4D-217ENST00000475255 PRDM10Q9NQV6 1147 aa16.77■□□□□ 0.28
SEMA4D-217ENST00000475255 DNTTIP2Q5QJE6 756 aaKnown RBP16.77■□□□□ 0.27
SEMA4D-217ENST00000475255 LRSAM1Q6UWE0 723 aa16.77■□□□□ 0.27
SEMA4D-217ENST00000475255 G2E3Q7L622 706 aa16.77■□□□□ 0.27
SEMA4D-217ENST00000475255 NECTIN2Q92692 538 aa16.77■□□□□ 0.27
SEMA4D-217ENST00000475255 ZKSCAN5Q9Y2L8 839 aa16.77■□□□□ 0.27
SEMA4D-217ENST00000475255 POGZQ7Z3K3 1410 aa16.77■□□□□ 0.27
SEMA4D-217ENST00000475255 SULT6B1Q6IMI4 303 aa16.76■□□□□ 0.27
SEMA4D-217ENST00000475255 ERC2O15083 957 aa16.76■□□□□ 0.27
SEMA4D-217ENST00000475255 GADD45BO75293 160 aaPredicted RBP16.76■□□□□ 0.27
SEMA4D-217ENST00000475255 C17orf53Q8N3J3 647 aaPredicted RBP16.76■□□□□ 0.27
SEMA4D-217ENST00000475255 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.76■□□□□ 0.27
SEMA4D-217ENST00000475255 ATP10DQ9P241 1426 aa16.76■□□□□ 0.27
SEMA4D-217ENST00000475255 FAM177BA6PVY3 158 aa16.76■□□□□ 0.27
SEMA4D-217ENST00000475255 SLC4A2P04920 1241 aa16.76■□□□□ 0.27
SEMA4D-217ENST00000475255 RILPL2Q969X0 211 aa16.76■□□□□ 0.27
SEMA4D-217ENST00000475255 CWC22Q9HCG8 908 aaKnown RBP16.75■□□□□ 0.27
SEMA4D-217ENST00000475255 RIMS2Q9UQ26 1411 aa16.75■□□□□ 0.27
SEMA4D-217ENST00000475255 REC8O95072 547 aa16.75■□□□□ 0.27
SEMA4D-217ENST00000475255 ANO2Q9NQ90 1003 aa16.74■□□□□ 0.27
SEMA4D-217ENST00000475255 RTL1A6NKG5 1358 aa16.74■□□□□ 0.27
SEMA4D-217ENST00000475255 NPM1P06748 294 aaKnown RBP eCLIP16.74■□□□□ 0.27
SEMA4D-217ENST00000475255 MAP2P11137 1827 aaKnown RBP16.74■□□□□ 0.27
SEMA4D-217ENST00000475255 TRIM6-TRIM34B2RNG4 842 aa16.73■□□□□ 0.27
SEMA4D-217ENST00000475255 ZNF500O60304 480 aaPredicted RBP16.73■□□□□ 0.27
SEMA4D-217ENST00000475255 PDE1AP54750 535 aa16.73■□□□□ 0.27
SEMA4D-217ENST00000475255 PLCB2Q00722 1185 aa16.73■□□□□ 0.27
SEMA4D-217ENST00000475255 ZFYVE9O95405 1425 aa16.73■□□□□ 0.27
SEMA4D-217ENST00000475255 RPAP2Q8IXW5 612 aaPredicted RBP16.73■□□□□ 0.27
SEMA4D-217ENST00000475255 FOXO3O43524 673 aa16.72■□□□□ 0.27
SEMA4D-217ENST00000475255 MAP4K4O95819 1239 aaPredicted RBP16.72■□□□□ 0.27
SEMA4D-217ENST00000475255 MYO5BQ9ULV0 1848 aa16.71■□□□□ 0.27
SEMA4D-217ENST00000475255 TXNDC2Q86VQ3 553 aa16.71■□□□□ 0.27
SEMA4D-217ENST00000475255 COG3Q96JB2 828 aa16.71■□□□□ 0.27
SEMA4D-217ENST00000475255 HECW2Q9P2P5 1572 aa16.71■□□□□ 0.27
SEMA4D-217ENST00000475255 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.71■□□□□ 0.26
SEMA4D-217ENST00000475255 PIK3C2BO00750 1634 aa16.7■□□□□ 0.26
SEMA4D-217ENST00000475255 LMOD3Q0VAK6 560 aa16.7■□□□□ 0.26
SEMA4D-217ENST00000475255 UNC5CLQ8IV45 518 aa16.7■□□□□ 0.26
SEMA4D-217ENST00000475255 RGS12O14924 1447 aa16.7■□□□□ 0.26
SEMA4D-217ENST00000475255 IL25Q9H293 177 aa16.7■□□□□ 0.26
SEMA4D-217ENST00000475255 SLC52A1Q9NWF4 448 aa16.69■□□□□ 0.26
SEMA4D-217ENST00000475255 TSPY26PQ9H489 355 aa16.69■□□□□ 0.26
SEMA4D-217ENST00000475255 USP25Q9UHP3 1055 aa16.69■□□□□ 0.26
SEMA4D-217ENST00000475255 HS1BP3Q53T59 392 aa16.68■□□□□ 0.26
SEMA4D-217ENST00000475255 TTC12Q9H892 705 aaPredicted RBP16.68■□□□□ 0.26
SEMA4D-217ENST00000475255 CCDC39Q9UFE4 941 aa16.68■□□□□ 0.26
SEMA4D-217ENST00000475255 ARHGEF40Q8TER5 1519 aa16.68■□□□□ 0.26
SEMA4D-217ENST00000475255 BRD1O95696 1058 aa16.68■□□□□ 0.26
SEMA4D-217ENST00000475255 IL1RAPL2Q9NP60 686 aa16.68■□□□□ 0.26
SEMA4D-217ENST00000475255 PODXL2Q9NZ53 605 aa16.68■□□□□ 0.26
SEMA4D-217ENST00000475255 EIF4A2Q14240 407 aaKnown RBP16.67■□□□□ 0.26
SEMA4D-217ENST00000475255 ESYT1Q9BSJ8 1104 aa16.67■□□□□ 0.26
SEMA4D-217ENST00000475255 DLG5Q8TDM6 1919 aa16.67■□□□□ 0.26
SEMA4D-217ENST00000475255 ANKRD26Q9UPS8 1709 aa16.67■□□□□ 0.26
SEMA4D-217ENST00000475255 PNMA6EA0A0J9YXQ4 647 aa16.67■□□□□ 0.26
SEMA4D-217ENST00000475255 HSP90AB2PQ58FF8 381 aa16.67■□□□□ 0.26
SEMA4D-217ENST00000475255 USP48Q86UV5 1035 aa16.67■□□□□ 0.26
SEMA4D-217ENST00000475255 MLECQ14165 292 aa16.66■□□□□ 0.26
SEMA4D-217ENST00000475255 CHL1O00533 1208 aa16.65■□□□□ 0.26
SEMA4D-217ENST00000475255 MBD3O95983 291 aa16.65■□□□□ 0.26
SEMA4D-217ENST00000475255 NUDT16Q96DE0 195 aaKnown RBP16.65■□□□□ 0.26
SEMA4D-217ENST00000475255 KIF20BQ96Q89 1820 aa16.65■□□□□ 0.26
SEMA4D-217ENST00000475255 ZHX1Q9UKY1 873 aaPredicted RBP16.65■□□□□ 0.26
SEMA4D-217ENST00000475255 ARHGAP31Q2M1Z3 1444 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms