RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 DLG5Q8TDM6 1919 aa13.21□□□□□ -0.29
PCCB-213ENST00000475214 FANCIQ9NVI1 1328 aa13.21□□□□□ -0.29
PCCB-213ENST00000475214 PLIN1O60240 522 aa13.21□□□□□ -0.29
PCCB-213ENST00000475214 GNAI1P63096 354 aa13.21□□□□□ -0.29
PCCB-213ENST00000475214 VPS72Q15906 364 aa13.21□□□□□ -0.29
PCCB-213ENST00000475214 CABLES1Q8TDN4 633 aa13.21□□□□□ -0.29
PCCB-213ENST00000475214 PLEKHG5O94827 1062 aa13.2□□□□□ -0.3
PCCB-213ENST00000475214 GAS2L2Q8NHY3 880 aa13.2□□□□□ -0.3
PCCB-213ENST00000475214 TSR2Q969E8 191 aaKnown RBP13.2□□□□□ -0.3
PCCB-213ENST00000475214 IFT57Q9NWB7 429 aa13.2□□□□□ -0.3
PCCB-213ENST00000475214 CCDC9Q9Y3X0 531 aaKnown RBP13.2□□□□□ -0.3
PCCB-213ENST00000475214 EXOSC9Q06265 439 aaKnown RBP13.19□□□□□ -0.3
PCCB-213ENST00000475214 LAS1LQ9Y4W2 734 aaKnown RBP13.19□□□□□ -0.3
PCCB-213ENST00000475214 NWD2Q9ULI1 1742 aa13.19□□□□□ -0.3
PCCB-213ENST00000475214 BCAR3O75815 825 aa13.18□□□□□ -0.3
PCCB-213ENST00000475214 CANXP27824 592 aaKnown RBP13.18□□□□□ -0.3
PCCB-213ENST00000475214 RARSP54136 660 aaKnown RBP13.18□□□□□ -0.3
PCCB-213ENST00000475214 EXOC6Q8TAG9 804 aa13.18□□□□□ -0.3
PCCB-213ENST00000475214 RTF1Q92541 710 aaKnown RBP13.18□□□□□ -0.3
PCCB-213ENST00000475214 FAM83GA6ND36 823 aa13.17□□□□□ -0.3
PCCB-213ENST00000475214 MTHFSDQ2M296 383 aaKnown RBP13.17□□□□□ -0.3
PCCB-213ENST00000475214 CCDC136Q96JN2 1154 aa13.17□□□□□ -0.3
PCCB-213ENST00000475214 CFAP44Q96MT7 982 aa13.17□□□□□ -0.3
PCCB-213ENST00000475214 BRWD3Q6RI45 1802 aa13.17□□□□□ -0.3
PCCB-213ENST00000475214 HTATSF1O43719 755 aaKnown RBP13.16□□□□□ -0.3
PCCB-213ENST00000475214 ONECUT3O60422 494 aaPredicted RBP13.16□□□□□ -0.3
PCCB-213ENST00000475214 ZNF853P0CG23 659 aa13.16□□□□□ -0.3
PCCB-213ENST00000475214 ZC3H6P61129 1189 aaKnown RBP13.16□□□□□ -0.3
PCCB-213ENST00000475214 SF3B2Q13435 895 aaKnown RBP13.16□□□□□ -0.3
PCCB-213ENST00000475214 B4GALNT3Q6L9W6 998 aa13.16□□□□□ -0.3
PCCB-213ENST00000475214 ANKRD24Q8TF21 1146 aa13.16□□□□□ -0.3
PCCB-213ENST00000475214 ZNF428Q96B54 188 aa13.16□□□□□ -0.3
PCCB-213ENST00000475214 CRBNQ96SW2 442 aa13.16□□□□□ -0.3
PCCB-213ENST00000475214 THUMPD2Q9BTF0 503 aaKnown RBP13.16□□□□□ -0.3
PCCB-213ENST00000475214 PDE3AQ14432 1141 aa13.15□□□□□ -0.3
PCCB-213ENST00000475214 NBPF6Q5VWK0 638 aa13.15□□□□□ -0.3
PCCB-213ENST00000475214 SEPT12Q8IYM1 358 aa13.15□□□□□ -0.3
PCCB-213ENST00000475214 NBPF4Q96M43 638 aa13.15□□□□□ -0.3
PCCB-213ENST00000475214 PRDM11Q9NQV5 511 aa13.15□□□□□ -0.3
PCCB-213ENST00000475214 BTG4Q9NY30 223 aa13.15□□□□□ -0.3
PCCB-213ENST00000475214 PLCH1Q4KWH8 1693 aa13.15□□□□□ -0.31
PCCB-213ENST00000475214 ABCA3Q99758 1704 aa13.14□□□□□ -0.31
PCCB-213ENST00000475214 A0A0G2JS52 829 aa13.14□□□□□ -0.31
PCCB-213ENST00000475214 MYT1Q01538 1121 aa13.14□□□□□ -0.31
PCCB-213ENST00000475214 DCTN1Q14203 1278 aa13.14□□□□□ -0.31
PCCB-213ENST00000475214 USHBP1Q8N6Y0 703 aa13.14□□□□□ -0.31
PCCB-213ENST00000475214 COL14A1Q05707 1796 aaKnown RBP13.13□□□□□ -0.31
PCCB-213ENST00000475214 GNAT3A8MTJ3 354 aa13.13□□□□□ -0.31
PCCB-213ENST00000475214 MS4A1P11836 297 aa13.13□□□□□ -0.31
PCCB-213ENST00000475214 C20orf194Q5TEA3 1177 aa13.13□□□□□ -0.31
PCCB-213ENST00000475214 MCM10Q7L590 875 aa13.13□□□□□ -0.31
PCCB-213ENST00000475214 DEFB132Q7Z7B7 95 aa13.13□□□□□ -0.31
PCCB-213ENST00000475214 FRAT1Q92837 279 aaPredicted RBP13.13□□□□□ -0.31
PCCB-213ENST00000475214 MBIPQ9NS73 344 aa13.13□□□□□ -0.31
PCCB-213ENST00000475214 ABCC6O95255 1503 aa13.13□□□□□ -0.31
PCCB-213ENST00000475214 ALDH1L2Q3SY69 923 aa13.12□□□□□ -0.31
PCCB-213ENST00000475214 PLEKHO1Q53GL0 409 aaPredicted RBP13.12□□□□□ -0.31
PCCB-213ENST00000475214 KRT27Q7Z3Y8 459 aa13.12□□□□□ -0.31
PCCB-213ENST00000475214 SMC4Q9NTJ3 1288 aa13.12□□□□□ -0.31
PCCB-213ENST00000475214 AXIN2Q9Y2T1 843 aa13.12□□□□□ -0.31
PCCB-213ENST00000475214 CRYBG1Q9Y4K1 1723 aa13.12□□□□□ -0.31
PCCB-213ENST00000475214 RGPD2P0DJD1 1756 aa13.12□□□□□ -0.31
PCCB-213ENST00000475214 CPDO75976 1380 aa13.11□□□□□ -0.31
PCCB-213ENST00000475214 MAP3K5Q99683 1374 aa13.11□□□□□ -0.31
PCCB-213ENST00000475214 CHL1O00533 1208 aa13.11□□□□□ -0.31
PCCB-213ENST00000475214 AMOTQ4VCS5 1084 aa13.11□□□□□ -0.31
PCCB-213ENST00000475214 RGPD5Q99666 1765 aa13.11□□□□□ -0.31
PCCB-213ENST00000475214 EP400Q96L91 3159 aa13.11□□□□□ -0.31
PCCB-213ENST00000475214 ERBB3P21860 1342 aa13.11□□□□□ -0.31
PCCB-213ENST00000475214 LRP5O75197 1615 aa13.1□□□□□ -0.31
PCCB-213ENST00000475214 CAMTA1Q9Y6Y1 1673 aa13.1□□□□□ -0.31
PCCB-213ENST00000475214 FAM98CQ17RN3 349 aaKnown RBP13.1□□□□□ -0.31
PCCB-213ENST00000475214 ZKSCAN2Q63HK3 967 aa13.1□□□□□ -0.31
PCCB-213ENST00000475214 SSH1Q8WYL5 1049 aa13.1□□□□□ -0.31
PCCB-213ENST00000475214 BCL2L13Q9BXK5 485 aa13.1□□□□□ -0.31
PCCB-213ENST00000475214 CRB1P82279 1406 aa13.1□□□□□ -0.31
PCCB-213ENST00000475214 NCAPD2Q15021 1401 aa13.1□□□□□ -0.31
PCCB-213ENST00000475214 COL18A1P39060 1754 aa13.09□□□□□ -0.31
PCCB-213ENST00000475214 IPO8O15397 1037 aaKnown RBP13.09□□□□□ -0.31
PCCB-213ENST00000475214 VAMP4O75379 141 aa13.09□□□□□ -0.31
PCCB-213ENST00000475214 CSB-PGBD3P0DP91 1061 aa13.09□□□□□ -0.31
PCCB-213ENST00000475214 EVA1CP58658 441 aa13.09□□□□□ -0.31
PCCB-213ENST00000475214 TWISTNBQ3B726 338 aaPredicted RBP13.09□□□□□ -0.31
PCCB-213ENST00000475214 NRAPQ86VF7 1730 aa13.09□□□□□ -0.31
PCCB-213ENST00000475214 SPATA31A5Q5VU36 1347 aa13.09□□□□□ -0.31
PCCB-213ENST00000475214 SPATA31A7Q8IWB4 1347 aa13.09□□□□□ -0.31
PCCB-213ENST00000475214 KIF16BQ96L93 1317 aa13.09□□□□□ -0.31
PCCB-213ENST00000475214 FAM208AQ9UK61 1670 aaKnown RBP13.08□□□□□ -0.31
PCCB-213ENST00000475214 KIAA0232Q92628 1395 aa13.08□□□□□ -0.31
PCCB-213ENST00000475214 NLRP2Q9NX02 1062 aa13.08□□□□□ -0.32
PCCB-213ENST00000475214 BRPF1P55201 1214 aaPredicted RBP13.07□□□□□ -0.32
PCCB-213ENST00000475214 AAMPQ13685 434 aa13.07□□□□□ -0.32
PCCB-213ENST00000475214 CHRNA2Q15822 529 aa13.07□□□□□ -0.32
PCCB-213ENST00000475214 AKAP4Q5JQC9 854 aa13.07□□□□□ -0.32
PCCB-213ENST00000475214 C1orf141Q5JVX7 400 aa13.07□□□□□ -0.32
PCCB-213ENST00000475214 RAPGEF4Q8WZA2 1011 aa13.07□□□□□ -0.32
PCCB-213ENST00000475214 BABAM1Q9NWV8 329 aa13.07□□□□□ -0.32
PCCB-213ENST00000475214 TSPYL4Q9UJ04 414 aa13.07□□□□□ -0.32
PCCB-213ENST00000475214 ELL2O00472 640 aaPredicted RBP13.06□□□□□ -0.32
PCCB-213ENST00000475214 TATP17735 454 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms