RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 ATP13A2Q9NQ11 1180 aa7.6□□□□□ -1.19
SDHB-204ENST00000475049 CHIC2Q9UKJ5 165 aa7.6□□□□□ -1.19
SDHB-204ENST00000475049 C11orf95C9JLR9 678 aaPredicted RBP7.59□□□□□ -1.19
SDHB-204ENST00000475049 ERVH48-1M5A8F1 160 aa7.59□□□□□ -1.19
SDHB-204ENST00000475049 ATG7O95352 703 aa7.59□□□□□ -1.19
SDHB-204ENST00000475049 ADH1CP00326 375 aa7.59□□□□□ -1.19
SDHB-204ENST00000475049 MYCP01106 439 aaPredicted RBP7.59□□□□□ -1.19
SDHB-204ENST00000475049 DHX9Q08211 1270 aaKnown RBP7.59□□□□□ -1.19
SDHB-204ENST00000475049 USP4Q13107 963 aa7.59□□□□□ -1.19
SDHB-204ENST00000475049 WASF2Q9Y6W5 498 aa7.59□□□□□ -1.19
SDHB-204ENST00000475049 GRM5P41594 1212 aa7.58□□□□□ -1.2
SDHB-204ENST00000475049 ATP1A2P50993 1020 aa7.58□□□□□ -1.2
SDHB-204ENST00000475049 PSME1Q06323 249 aa7.58□□□□□ -1.2
SDHB-204ENST00000475049 PDE4CQ08493 712 aa7.58□□□□□ -1.2
SDHB-204ENST00000475049 NR5A1Q13285 461 aa7.58□□□□□ -1.2
SDHB-204ENST00000475049 MPNDQ8N594 471 aa7.58□□□□□ -1.2
SDHB-204ENST00000475049 TRIM52Q96A61 297 aa7.58□□□□□ -1.2
SDHB-204ENST00000475049 RBM19Q9Y4C8 960 aaKnown RBP7.58□□□□□ -1.2
SDHB-204ENST00000475049 USP17L15C9J2P7 530 aa7.57□□□□□ -1.2
SDHB-204ENST00000475049 USP17L10C9JJH3 530 aa7.57□□□□□ -1.2
SDHB-204ENST00000475049 USP17L13C9JLJ4 530 aa7.57□□□□□ -1.2
SDHB-204ENST00000475049 USP17L12C9JPN9 530 aa7.57□□□□□ -1.2
SDHB-204ENST00000475049 USP17L11C9JVI0 530 aa7.57□□□□□ -1.2
SDHB-204ENST00000475049 USP17L21D6R901 530 aa7.57□□□□□ -1.2
SDHB-204ENST00000475049 USP17L18D6R9N7 530 aa7.57□□□□□ -1.2
SDHB-204ENST00000475049 USP17L22D6RA61 530 aa7.57□□□□□ -1.2
SDHB-204ENST00000475049 USP17L17D6RBQ6 530 aa7.57□□□□□ -1.2
SDHB-204ENST00000475049 USP17L19D6RCP7 530 aa7.57□□□□□ -1.2
SDHB-204ENST00000475049 USP17L20D6RJB6 530 aa7.57□□□□□ -1.2
SDHB-204ENST00000475049 GTF2IP78347 998 aa7.57□□□□□ -1.2
SDHB-204ENST00000475049 USP17L24Q0WX57 530 aa7.57□□□□□ -1.2
SDHB-204ENST00000475049 CRTC2Q53ET0 693 aaPredicted RBP7.57□□□□□ -1.2
SDHB-204ENST00000475049 CCDC116Q8IYX3 515 aa7.57□□□□□ -1.2
SDHB-204ENST00000475049 OGFOD1Q8N543 542 aa7.57□□□□□ -1.2
SDHB-204ENST00000475049 ZNF594Q96JF6 807 aaPredicted RBP7.57□□□□□ -1.2
SDHB-204ENST00000475049 DNAAF2Q9NVR5 837 aaKnown RBP7.57□□□□□ -1.2
SDHB-204ENST00000475049 NOVA2Q9UNW9 492 aaKnown RBP7.57□□□□□ -1.2
SDHB-204ENST00000475049 FAM196BA6NMK8 535 aa7.56□□□□□ -1.2
SDHB-204ENST00000475049 LCE2AQ5TA79 106 aaPredicted RBP7.56□□□□□ -1.2
SDHB-204ENST00000475049 TREML4Q6UXN2 200 aa7.56□□□□□ -1.2
SDHB-204ENST00000475049 CYLDQ9NQC7 956 aa7.56□□□□□ -1.2
SDHB-204ENST00000475049 TMPRSS4Q9NRS4 437 aa7.56□□□□□ -1.2
SDHB-204ENST00000475049 SNRPBP14678 240 aaKnown RBP7.55□□□□□ -1.2
SDHB-204ENST00000475049 PPP1R26Q5T8A7 1209 aaPredicted RBP7.55□□□□□ -1.2
SDHB-204ENST00000475049 TRIM47Q96LD4 638 aa7.55□□□□□ -1.2
SDHB-204ENST00000475049 SCTRP47872 440 aa7.54□□□□□ -1.2
SDHB-204ENST00000475049 CLDN10P78369 228 aa7.54□□□□□ -1.2
SDHB-204ENST00000475049 PTK7Q13308 1070 aa7.54□□□□□ -1.2
SDHB-204ENST00000475049 NNTQ13423 1086 aa7.54□□□□□ -1.2
SDHB-204ENST00000475049 CC2D2BQ6DHV5 1058 aa7.54□□□□□ -1.2
SDHB-204ENST00000475049 ZNF784Q8NCA9 323 aaPredicted RBP7.54□□□□□ -1.2
SDHB-204ENST00000475049 FAM200AQ8TCP9 573 aa7.54□□□□□ -1.2
SDHB-204ENST00000475049 SENP2Q9HC62 589 aa7.54□□□□□ -1.2
SDHB-204ENST00000475049 PGPEP1Q9NXJ5 209 aa7.54□□□□□ -1.2
SDHB-204ENST00000475049 NR3C2P08235 984 aa7.53□□□□□ -1.2
SDHB-204ENST00000475049 DPYDQ12882 1025 aa7.53□□□□□ -1.2
SDHB-204ENST00000475049 ELOAQ14241 798 aaKnown RBP7.53□□□□□ -1.2
SDHB-204ENST00000475049 ANKMY2Q8IV38 441 aa7.53□□□□□ -1.2
SDHB-204ENST00000475049 LARGE2Q8N3Y3 721 aa7.53□□□□□ -1.2
SDHB-204ENST00000475049 TPCN2Q8NHX9 752 aa7.53□□□□□ -1.2
SDHB-204ENST00000475049 STK32AQ8WU08 396 aa7.53□□□□□ -1.2
SDHB-204ENST00000475049 TRAIPQ9BWF2 469 aa7.53□□□□□ -1.2
SDHB-204ENST00000475049 USTQ9Y2C2 406 aa7.53□□□□□ -1.2
SDHB-204ENST00000475049 EMILIN1Q9Y6C2 1016 aa7.53□□□□□ -1.2
SDHB-204ENST00000475049 CARNS1A5YM72 827 aa7.52□□□□□ -1.21
SDHB-204ENST00000475049 CAPN5O15484 640 aaPredicted RBP7.52□□□□□ -1.21
SDHB-204ENST00000475049 ERVK-9P63128 1117 aa7.52□□□□□ -1.21
SDHB-204ENST00000475049 CCDC102BQ68D86 513 aa7.52□□□□□ -1.21
SDHB-204ENST00000475049 KIFC2Q96AC6 838 aa7.52□□□□□ -1.21
SDHB-204ENST00000475049 ZMIZ1Q9ULJ6 1067 aa7.52□□□□□ -1.21
SDHB-204ENST00000475049 TMEM164Q5U3C3 297 aa7.51□□□□□ -1.21
SDHB-204ENST00000475049 TRIM46Q7Z4K8 759 aa7.51□□□□□ -1.21
SDHB-204ENST00000475049 KIAA1024Q9UPX6 916 aa7.51□□□□□ -1.21
SDHB-204ENST00000475049 PCDHGA11Q9Y5H2 935 aa7.51□□□□□ -1.21
SDHB-204ENST00000475049 ZBTB7BO15156 539 aaPredicted RBP7.5□□□□□ -1.21
SDHB-204ENST00000475049 AEBP1Q8IUX7 1158 aa7.5□□□□□ -1.21
SDHB-204ENST00000475049 SFI1A8K8P3 1242 aa7.49□□□□□ -1.21
SDHB-204ENST00000475049 ZIC2O95409 532 aaPredicted RBP7.49□□□□□ -1.21
SDHB-204ENST00000475049 BMP1P13497 986 aa7.49□□□□□ -1.21
SDHB-204ENST00000475049 SEC13P55735 322 aa7.49□□□□□ -1.21
SDHB-204ENST00000475049 WDR4P57081 412 aaKnown RBP7.49□□□□□ -1.21
SDHB-204ENST00000475049 NFX1Q12986 1120 aaKnown RBP7.49□□□□□ -1.21
SDHB-204ENST00000475049 CYP2U1Q7Z449 544 aa7.49□□□□□ -1.21
SDHB-204ENST00000475049 SIX5Q8N196 739 aa7.49□□□□□ -1.21
SDHB-204ENST00000475049 KLF16Q9BXK1 252 aaPredicted RBP7.49□□□□□ -1.21
SDHB-204ENST00000475049 OSBPL3Q9H4L5 887 aa7.49□□□□□ -1.21
SDHB-204ENST00000475049 TMEM88BA6NKF7 163 aa7.48□□□□□ -1.21
SDHB-204ENST00000475049 LILRA1O75019 489 aa7.48□□□□□ -1.21
SDHB-204ENST00000475049 WFS1O76024 890 aa7.48□□□□□ -1.21
SDHB-204ENST00000475049 ITPKCQ96DU7 683 aa7.48□□□□□ -1.21
SDHB-204ENST00000475049 HINFPQ9BQA5 517 aa7.48□□□□□ -1.21
SDHB-204ENST00000475049 ZBTB7CA1YPR0 619 aa7.47□□□□□ -1.21
SDHB-204ENST00000475049 TIMP2P16035 220 aa7.47□□□□□ -1.21
SDHB-204ENST00000475049 ADD1P35611 737 aaKnown RBP7.47□□□□□ -1.21
SDHB-204ENST00000475049 CBLBQ13191 982 aa7.47□□□□□ -1.21
SDHB-204ENST00000475049 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.47□□□□□ -1.21
SDHB-204ENST00000475049 ZFAND3Q9H8U3 227 aa7.47□□□□□ -1.21
SDHB-204ENST00000475049 TERTO14746 1132 aaKnown RBP7.46□□□□□ -1.22
SDHB-204ENST00000475049 STAU1O95793 577 aaKnown RBP7.46□□□□□ -1.22
SDHB-204ENST00000475049 GDF10P55107 478 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms