RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 LTV1Q96GA3 475 aaPredicted RBP13.09□□□□□ -0.31
PDPN-204ENST00000475043 PEAK1Q9H792 1746 aa13.09□□□□□ -0.31
PDPN-204ENST00000475043 C11orf95C9JLR9 678 aaPredicted RBP13.08□□□□□ -0.32
PDPN-204ENST00000475043 EXOC5O00471 708 aa13.08□□□□□ -0.32
PDPN-204ENST00000475043 FYB1O15117 783 aa13.08□□□□□ -0.32
PDPN-204ENST00000475043 IP6K1Q92551 441 aa13.08□□□□□ -0.32
PDPN-204ENST00000475043 FAM208AQ9UK61 1670 aaKnown RBP13.08□□□□□ -0.32
PDPN-204ENST00000475043 MAP3K19Q56UN5 1328 aa13.08□□□□□ -0.32
PDPN-204ENST00000475043 PSDA5PKW4 1024 aaPredicted RBP13.07□□□□□ -0.32
PDPN-204ENST00000475043 HSPA5P11021 654 aaKnown RBP13.07□□□□□ -0.32
PDPN-204ENST00000475043 NSD3Q9BZ95 1437 aa13.06□□□□□ -0.32
PDPN-204ENST00000475043 MARCH10Q8NA82 808 aaPredicted RBP13.06□□□□□ -0.32
PDPN-204ENST00000475043 CAMKK2Q96RR4 588 aa13.06□□□□□ -0.32
PDPN-204ENST00000475043 RGPD2P0DJD1 1756 aa13.05□□□□□ -0.32
PDPN-204ENST00000475043 IL2RBP14784 551 aa13.05□□□□□ -0.32
PDPN-204ENST00000475043 HOXC9P31274 260 aa13.05□□□□□ -0.32
PDPN-204ENST00000475043 RRS1Q15050 365 aaKnown RBP13.05□□□□□ -0.32
PDPN-204ENST00000475043 CARD14Q9BXL6 1004 aa13.05□□□□□ -0.32
PDPN-204ENST00000475043 RREB1Q92766 1687 aa13.05□□□□□ -0.32
PDPN-204ENST00000475043 PARD3Q8TEW0 1356 aa13.05□□□□□ -0.32
PDPN-204ENST00000475043 TNS2Q63HR2 1409 aa13.05□□□□□ -0.32
PDPN-204ENST00000475043 NUP188Q5SRE5 1749 aa13.03□□□□□ -0.32
PDPN-204ENST00000475043 R3HDM1Q15032 1099 aaKnown RBP13.03□□□□□ -0.32
PDPN-204ENST00000475043 FARP1Q9Y4F1 1045 aaPredicted RBP13.03□□□□□ -0.32
PDPN-204ENST00000475043 PTF1AQ7RTS3 328 aa13.02□□□□□ -0.33
PDPN-204ENST00000475043 BCL11BQ9C0K0 894 aaPredicted RBP13.02□□□□□ -0.33
PDPN-204ENST00000475043 RTL1A6NKG5 1358 aa13.02□□□□□ -0.33
PDPN-204ENST00000475043 RGPD3A6NKT7 1758 aaPredicted RBP13.02□□□□□ -0.33
PDPN-204ENST00000475043 RGPD4Q7Z3J3 1758 aa13.02□□□□□ -0.33
PDPN-204ENST00000475043 CGNL1Q0VF96 1302 aa13.01□□□□□ -0.33
PDPN-204ENST00000475043 SMG6Q86US8 1419 aaKnown RBP13.01□□□□□ -0.33
PDPN-204ENST00000475043 BCL9O00512 1426 aa13□□□□□ -0.33
PDPN-204ENST00000475043 PPM1GO15355 546 aaPredicted RBP13□□□□□ -0.33
PDPN-204ENST00000475043 NBPF14Q5TI25 921 aa13□□□□□ -0.33
PDPN-204ENST00000475043 DDX54Q8TDD1 881 aaKnown RBP13□□□□□ -0.33
PDPN-204ENST00000475043 ACSBG1Q96GR2 724 aa13□□□□□ -0.33
PDPN-204ENST00000475043 MAP2P11137 1827 aaKnown RBP12.99□□□□□ -0.33
PDPN-204ENST00000475043 ANKRD26Q9UPS8 1709 aa12.99□□□□□ -0.33
PDPN-204ENST00000475043 NHSQ6T4R5 1651 aa12.99□□□□□ -0.33
PDPN-204ENST00000475043 FLT4P35916 1363 aa12.99□□□□□ -0.33
PDPN-204ENST00000475043 PLSCR1O15162 318 aa12.99□□□□□ -0.33
PDPN-204ENST00000475043 HSP90AB2PQ58FF8 381 aa12.99□□□□□ -0.33
PDPN-204ENST00000475043 KAT6BQ8WYB5 2073 aa12.98□□□□□ -0.33
PDPN-204ENST00000475043 KCNQ2O43526 872 aa12.98□□□□□ -0.33
PDPN-204ENST00000475043 USHBP1Q8N6Y0 703 aa12.98□□□□□ -0.33
PDPN-204ENST00000475043 CREBZFQ9NS37 354 aa12.98□□□□□ -0.33
PDPN-204ENST00000475043 EMILIN1Q9Y6C2 1016 aa12.98□□□□□ -0.33
PDPN-204ENST00000475043 LRP5O75197 1615 aa12.98□□□□□ -0.33
PDPN-204ENST00000475043 INSRP06213 1382 aa12.97□□□□□ -0.33
PDPN-204ENST00000475043 NBPF6Q5VWK0 638 aa12.97□□□□□ -0.33
PDPN-204ENST00000475043 NBPF4Q96M43 638 aa12.97□□□□□ -0.33
PDPN-204ENST00000475043 PANK3Q9H999 370 aa12.97□□□□□ -0.33
PDPN-204ENST00000475043 KIF24Q5T7B8 1368 aa12.96□□□□□ -0.33
PDPN-204ENST00000475043 TNNT2P45379 298 aaPredicted RBP12.96□□□□□ -0.33
PDPN-204ENST00000475043 RAPGEF4Q8WZA2 1011 aa12.96□□□□□ -0.33
PDPN-204ENST00000475043 BTAF1O14981 1849 aa12.96□□□□□ -0.33
PDPN-204ENST00000475043 MEGF6O75095 1541 aa12.96□□□□□ -0.33
PDPN-204ENST00000475043 SHANK3Q9BYB0 1731 aa12.96□□□□□ -0.34
PDPN-204ENST00000475043 PROM2Q8N271 834 aa12.95□□□□□ -0.34
PDPN-204ENST00000475043 ZCRB1Q8TBF4 217 aaKnown RBP12.95□□□□□ -0.34
PDPN-204ENST00000475043 DOT1LQ8TEK3 1739 aa12.95□□□□□ -0.34
PDPN-204ENST00000475043 TXNRD1Q16881 649 aa12.94□□□□□ -0.34
PDPN-204ENST00000475043 SYTL4Q96C24 671 aaPredicted RBP12.94□□□□□ -0.34
PDPN-204ENST00000475043 SRCAPQ6ZRS2 3230 aa12.94□□□□□ -0.34
PDPN-204ENST00000475043 TATP17735 454 aaPredicted RBP12.93□□□□□ -0.34
PDPN-204ENST00000475043 POLKQ9UBT6 870 aa12.92□□□□□ -0.34
PDPN-204ENST00000475043 KIF7Q2M1P5 1343 aa12.91□□□□□ -0.34
PDPN-204ENST00000475043 WASHC2AQ641Q2 1341 aa12.91□□□□□ -0.34
PDPN-204ENST00000475043 CD44P16070 742 aaKnown RBP12.91□□□□□ -0.34
PDPN-204ENST00000475043 ANO8Q9HCE9 1232 aaPredicted RBP12.91□□□□□ -0.34
PDPN-204ENST00000475043 KNSTRNQ9Y448 316 aa12.91□□□□□ -0.34
PDPN-204ENST00000475043 NSD2O96028 1365 aa12.91□□□□□ -0.34
PDPN-204ENST00000475043 PRIM1P49642 420 aaKnown RBP12.9□□□□□ -0.34
PDPN-204ENST00000475043 MORC1Q86VD1 984 aa12.9□□□□□ -0.34
PDPN-204ENST00000475043 GABBR2O75899 941 aa12.89□□□□□ -0.35
PDPN-204ENST00000475043 STK32BQ9NY57 414 aa12.89□□□□□ -0.35
PDPN-204ENST00000475043 PCDH11XQ9BZA7 1347 aa12.88□□□□□ -0.35
PDPN-204ENST00000475043 PCDH11YQ9BZA8 1340 aa12.88□□□□□ -0.35
PDPN-204ENST00000475043 PKD1L3Q7Z443 1732 aa12.88□□□□□ -0.35
PDPN-204ENST00000475043 EYA1Q99502 592 aa12.88□□□□□ -0.35
PDPN-204ENST00000475043 CASZ1Q86V15 1759 aa12.87□□□□□ -0.35
PDPN-204ENST00000475043 EIF4A2Q14240 407 aaKnown RBP12.87□□□□□ -0.35
PDPN-204ENST00000475043 SLC15A2Q16348 729 aa12.87□□□□□ -0.35
PDPN-204ENST00000475043 SPON1Q9HCB6 807 aa12.87□□□□□ -0.35
PDPN-204ENST00000475043 PDGFDQ9GZP0 370 aaPredicted RBP12.86□□□□□ -0.35
PDPN-204ENST00000475043 PPP1R1BQ9UD71 204 aaPredicted RBP12.86□□□□□ -0.35
PDPN-204ENST00000475043 SPG7Q9UQ90 795 aa12.86□□□□□ -0.35
PDPN-204ENST00000475043 NCAPD2Q15021 1401 aa12.86□□□□□ -0.35
PDPN-204ENST00000475043 LY75O60449 1722 aa12.85□□□□□ -0.35
PDPN-204ENST00000475043 PAPPAQ13219 1627 aa12.85□□□□□ -0.35
PDPN-204ENST00000475043 CYP27B1O15528 508 aa12.85□□□□□ -0.35
PDPN-204ENST00000475043 ITGB4P16144 1822 aa12.85□□□□□ -0.35
PDPN-204ENST00000475043 TOGARAM1Q9Y4F4 1720 aa12.85□□□□□ -0.35
PDPN-204ENST00000475043 ZBTB7AO95365 584 aa12.84□□□□□ -0.35
PDPN-204ENST00000475043 KCNQ4P56696 695 aa12.84□□□□□ -0.35
PDPN-204ENST00000475043 CNGB1Q14028 1251 aaPredicted RBP12.84□□□□□ -0.35
PDPN-204ENST00000475043 SLC27A3Q5K4L6 730 aa12.84□□□□□ -0.35
PDPN-204ENST00000475043 MPRIPQ6WCQ1 1025 aa12.84□□□□□ -0.35
PDPN-204ENST00000475043 LRRC4BQ9NT99 713 aa12.84□□□□□ -0.35
PDPN-204ENST00000475043 AMER1Q5JTC6 1135 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms