RNA–Protein interactions for RNA: ENST00000474911.5

RTN1-205, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-205ENST00000474911 SMG6Q86US8 1419 aaKnown RBP18.04■□□□□ 0.48
RTN1-205ENST00000474911 APBA3O96018 575 aa18.04■□□□□ 0.48
RTN1-205ENST00000474911 TNNT2P45379 298 aaPredicted RBP18.04■□□□□ 0.48
RTN1-205ENST00000474911 RREB1Q92766 1687 aa18.03■□□□□ 0.48
RTN1-205ENST00000474911 CAMKK2Q96RR4 588 aa18.03■□□□□ 0.48
RTN1-205ENST00000474911 HSP90AB2PQ58FF8 381 aa18.02■□□□□ 0.48
RTN1-205ENST00000474911 BCL11BQ9C0K0 894 aaPredicted RBP18.01■□□□□ 0.47
RTN1-205ENST00000474911 EMILIN1Q9Y6C2 1016 aa18.01■□□□□ 0.47
RTN1-205ENST00000474911 EZH2Q15910 746 aaKnown RBP18■□□□□ 0.47
RTN1-205ENST00000474911 NBPF6Q5VWK0 638 aa18■□□□□ 0.47
RTN1-205ENST00000474911 NBPF4Q96M43 638 aa18■□□□□ 0.47
RTN1-205ENST00000474911 NHSQ6T4R5 1651 aa18■□□□□ 0.47
RTN1-205ENST00000474911 SHANK3Q9BYB0 1731 aa17.99■□□□□ 0.47
RTN1-205ENST00000474911 PNISRQ8TF01 805 aaKnown RBP17.99■□□□□ 0.47
RTN1-205ENST00000474911 NUP188Q5SRE5 1749 aa17.99■□□□□ 0.47
RTN1-205ENST00000474911 MTHFSP49914 203 aa17.98■□□□□ 0.47
RTN1-205ENST00000474911 FAM9BQ8IZU0 186 aa17.98■□□□□ 0.47
RTN1-205ENST00000474911 CFAP53Q96M91 514 aa17.98■□□□□ 0.47
RTN1-205ENST00000474911 POLKQ9UBT6 870 aa17.98■□□□□ 0.47
RTN1-205ENST00000474911 MEGF6O75095 1541 aa17.98■□□□□ 0.47
RTN1-205ENST00000474911 PLSCR1O15162 318 aa17.98■□□□□ 0.47
RTN1-205ENST00000474911 YTHDC1Q96MU7 727 aaKnown RBP17.98■□□□□ 0.47
RTN1-205ENST00000474911 KAT6BQ8WYB5 2073 aa17.97■□□□□ 0.47
RTN1-205ENST00000474911 NCAPD2Q15021 1401 aa17.96■□□□□ 0.47
RTN1-205ENST00000474911 PPM1GO15355 546 aaPredicted RBP17.96■□□□□ 0.47
RTN1-205ENST00000474911 PTF1AQ7RTS3 328 aa17.94■□□□□ 0.46
RTN1-205ENST00000474911 ZCRB1Q8TBF4 217 aaKnown RBP17.94■□□□□ 0.46
RTN1-205ENST00000474911 RAPGEF4Q8WZA2 1011 aa17.94■□□□□ 0.46
RTN1-205ENST00000474911 WDR43Q15061 677 aaKnown RBP eCLIP17.93■□□□□ 0.46
RTN1-205ENST00000474911 USHBP1Q8N6Y0 703 aa17.93■□□□□ 0.46
RTN1-205ENST00000474911 COL3A1P02461 1466 aaPredicted RBP17.93■□□□□ 0.46
RTN1-205ENST00000474911 BTAF1O14981 1849 aa17.93■□□□□ 0.46
RTN1-205ENST00000474911 PKD1L3Q7Z443 1732 aa17.92■□□□□ 0.46
RTN1-205ENST00000474911 KCNQ2O43526 872 aa17.91■□□□□ 0.46
RTN1-205ENST00000474911 TATP17735 454 aaPredicted RBP17.91■□□□□ 0.46
RTN1-205ENST00000474911 DDX54Q8TDD1 881 aaKnown RBP17.91■□□□□ 0.46
RTN1-205ENST00000474911 DOT1LQ8TEK3 1739 aa17.91■□□□□ 0.46
RTN1-205ENST00000474911 ACSBG1Q96GR2 724 aa17.89■□□□□ 0.46
RTN1-205ENST00000474911 EYA1Q99502 592 aa17.89■□□□□ 0.46
RTN1-205ENST00000474911 PLEKHG2Q9H7P9 1386 aa17.89■□□□□ 0.45
RTN1-205ENST00000474911 EIF4A2Q14240 407 aaKnown RBP17.89■□□□□ 0.45
RTN1-205ENST00000474911 NBPF14Q5TI25 921 aa17.89■□□□□ 0.45
RTN1-205ENST00000474911 PCDH11XQ9BZA7 1347 aa17.88■□□□□ 0.45
RTN1-205ENST00000474911 PCDH11YQ9BZA8 1340 aa17.88■□□□□ 0.45
RTN1-205ENST00000474911 LRP5O75197 1615 aa17.88■□□□□ 0.45
RTN1-205ENST00000474911 PSDA5PKW4 1024 aaPredicted RBP17.88■□□□□ 0.45
RTN1-205ENST00000474911 R3HDM1Q15032 1099 aaKnown RBP17.88■□□□□ 0.45
RTN1-205ENST00000474911 NUDCQ9Y266 331 aa17.88■□□□□ 0.45
RTN1-205ENST00000474911 DIAPH1O60610 1272 aaKnown RBP17.87■□□□□ 0.45
RTN1-205ENST00000474911 PROM2Q8N271 834 aa17.87■□□□□ 0.45
RTN1-205ENST00000474911 HNRNPUQ00839 825 aaKnown RBP eCLIP17.86■□□□□ 0.45
RTN1-205ENST00000474911 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.86■□□□□ 0.45
RTN1-205ENST00000474911 ADAMTS8Q9UP79 889 aa17.86■□□□□ 0.45
RTN1-205ENST00000474911 IGSF1Q8N6C5 1336 aa17.86■□□□□ 0.45
RTN1-205ENST00000474911 TXNRD1Q16881 649 aa17.85■□□□□ 0.45
RTN1-205ENST00000474911 SRCAPQ6ZRS2 3230 aa17.84■□□□□ 0.45
RTN1-205ENST00000474911 SPG7Q9UQ90 795 aa17.83■□□□□ 0.45
RTN1-205ENST00000474911 LY75O60449 1722 aa17.83■□□□□ 0.44
RTN1-205ENST00000474911 CYP27B1O15528 508 aa17.82■□□□□ 0.44
RTN1-205ENST00000474911 PRIM1P49642 420 aaKnown RBP17.82■□□□□ 0.44
RTN1-205ENST00000474911 ITGB4P16144 1822 aa17.82■□□□□ 0.44
RTN1-205ENST00000474911 PAPPAQ13219 1627 aa17.82■□□□□ 0.44
RTN1-205ENST00000474911 CENPBP07199 599 aaPredicted RBP17.81■□□□□ 0.44
RTN1-205ENST00000474911 TOGARAM1Q9Y4F4 1720 aa17.81■□□□□ 0.44
RTN1-205ENST00000474911 U2SURPO15042 1029 aaKnown RBP17.81■□□□□ 0.44
RTN1-205ENST00000474911 U2AF1L5P0DN76 240 aaPredicted RBP17.81■□□□□ 0.44
RTN1-205ENST00000474911 IL13P35225 146 aa17.81■□□□□ 0.44
RTN1-205ENST00000474911 U2AF1Q01081 240 aaKnown RBP eCLIP17.81■□□□□ 0.44
RTN1-205ENST00000474911 NKX1-1Q15270 411 aaPredicted RBP17.81■□□□□ 0.44
RTN1-205ENST00000474911 SYTL4Q96C24 671 aaPredicted RBP17.81■□□□□ 0.44
RTN1-205ENST00000474911 ANO8Q9HCE9 1232 aaPredicted RBP17.8■□□□□ 0.44
RTN1-205ENST00000474911 SLC27A3Q5K4L6 730 aa17.79■□□□□ 0.44
RTN1-205ENST00000474911 CASZ1Q86V15 1759 aa17.78■□□□□ 0.44
RTN1-205ENST00000474911 KDRP35968 1356 aa17.78■□□□□ 0.44
RTN1-205ENST00000474911 ZBED9Q6R2W3 1325 aa17.78■□□□□ 0.44
RTN1-205ENST00000474911 IFNL2Q8IZJ0 200 aa17.77■□□□□ 0.44
RTN1-205ENST00000474911 SLC15A2Q16348 729 aa17.76■□□□□ 0.43
RTN1-205ENST00000474911 PNNQ9H307 717 aaKnown RBP17.76■□□□□ 0.43
RTN1-205ENST00000474911 STK32BQ9NY57 414 aa17.76■□□□□ 0.43
RTN1-205ENST00000474911 PHKG2P15735 406 aa17.75■□□□□ 0.43
RTN1-205ENST00000474911 CCDC146Q8IYE0 955 aa17.75■□□□□ 0.43
RTN1-205ENST00000474911 RUNDC1Q96C34 613 aa17.75■□□□□ 0.43
RTN1-205ENST00000474911 LRRC4BQ9NT99 713 aa17.75■□□□□ 0.43
RTN1-205ENST00000474911 QSER1Q2KHR3 1735 aa17.75■□□□□ 0.43
RTN1-205ENST00000474911 FCHSD2O94868 740 aa17.74■□□□□ 0.43
RTN1-205ENST00000474911 AMOTQ4VCS5 1084 aa17.74■□□□□ 0.43
RTN1-205ENST00000474911 PLEKHO1Q53GL0 409 aaPredicted RBP17.73■□□□□ 0.43
RTN1-205ENST00000474911 SULT6B1Q6IMI4 303 aa17.73■□□□□ 0.43
RTN1-205ENST00000474911 AEBP1Q8IUX7 1158 aa17.73■□□□□ 0.43
RTN1-205ENST00000474911 MPRIPQ6WCQ1 1025 aa17.72■□□□□ 0.43
RTN1-205ENST00000474911 NGEFQ8N5V2 710 aa17.72■□□□□ 0.43
RTN1-205ENST00000474911 HSP90AB1P08238 724 aaKnown RBP17.72■□□□□ 0.43
RTN1-205ENST00000474911 RSPH6AQ9H0K4 717 aa17.72■□□□□ 0.43
RTN1-205ENST00000474911 TAF1LQ8IZX4 1826 aa17.72■□□□□ 0.43
RTN1-205ENST00000474911 HMGB2P26583 209 aaKnown RBP17.71■□□□□ 0.43
RTN1-205ENST00000474911 PLEKHF1Q96S99 279 aa17.71■□□□□ 0.43
RTN1-205ENST00000474911 MAPK8IP3Q9UPT6 1336 aa17.7■□□□□ 0.42
RTN1-205ENST00000474911 C5P01031 1676 aa17.7■□□□□ 0.42
RTN1-205ENST00000474911 APAF1O14727 1248 aa17.7■□□□□ 0.42
RTN1-205ENST00000474911 NEFMP07197 916 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms