RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ANKRD36BQ8N2N9 1353 aa19.71■□□□□ 0.75
CCDC78-209ENST00000474647 MAP3K5Q99683 1374 aa19.71■□□□□ 0.75
CCDC78-209ENST00000474647 FBLN1P23142 703 aa19.71■□□□□ 0.75
CCDC78-209ENST00000474647 KCNQ4P56696 695 aa19.71■□□□□ 0.75
CCDC78-209ENST00000474647 SLC27A3Q5K4L6 730 aa19.71■□□□□ 0.75
CCDC78-209ENST00000474647 AKT1S1Q96B36 256 aa19.71■□□□□ 0.75
CCDC78-209ENST00000474647 PUS7Q96PZ0 661 aaKnown RBP19.71■□□□□ 0.75
CCDC78-209ENST00000474647 ST20-MTHFSA0A0A6YYL1 179 aa19.7■□□□□ 0.74
CCDC78-209ENST00000474647 PNPLA7Q6ZV29 1317 aa19.7■□□□□ 0.74
CCDC78-209ENST00000474647 POLD1P28340 1107 aa19.69■□□□□ 0.74
CCDC78-209ENST00000474647 PRIM1P49642 420 aaKnown RBP19.69■□□□□ 0.74
CCDC78-209ENST00000474647 TESK2Q96S53 571 aa19.69■□□□□ 0.74
CCDC78-209ENST00000474647 TFCP2L1Q9NZI6 479 aa19.69■□□□□ 0.74
CCDC78-209ENST00000474647 NSD2O96028 1365 aa19.69■□□□□ 0.74
CCDC78-209ENST00000474647 GPR162Q16538 588 aa19.68■□□□□ 0.74
CCDC78-209ENST00000474647 PELP1Q8IZL8 1130 aaKnown RBP19.68■□□□□ 0.74
CCDC78-209ENST00000474647 RTL1A6NKG5 1358 aa19.68■□□□□ 0.74
CCDC78-209ENST00000474647 TOGARAM1Q9Y4F4 1720 aa19.68■□□□□ 0.74
CCDC78-209ENST00000474647 SMG6Q86US8 1419 aaKnown RBP19.68■□□□□ 0.74
CCDC78-209ENST00000474647 ZCRB1Q8TBF4 217 aaKnown RBP19.67■□□□□ 0.74
CCDC78-209ENST00000474647 SLC16A10Q8TF71 515 aa19.67■□□□□ 0.74
CCDC78-209ENST00000474647 RRS1Q15050 365 aaKnown RBP19.66■□□□□ 0.74
CCDC78-209ENST00000474647 MAP2P11137 1827 aaKnown RBP19.66■□□□□ 0.74
CCDC78-209ENST00000474647 PKD1L3Q7Z443 1732 aa19.65■□□□□ 0.74
CCDC78-209ENST00000474647 USHBP1Q8N6Y0 703 aa19.65■□□□□ 0.74
CCDC78-209ENST00000474647 MSH5O43196 834 aa19.64■□□□□ 0.73
CCDC78-209ENST00000474647 CCNL1Q9UK58 526 aaPredicted RBP19.64■□□□□ 0.73
CCDC78-209ENST00000474647 USP47Q96K76 1375 aa19.64■□□□□ 0.73
CCDC78-209ENST00000474647 GGNBP2Q9H3C7 697 aa19.63■□□□□ 0.73
CCDC78-209ENST00000474647 UBR3Q6ZT12 1888 aa19.62■□□□□ 0.73
CCDC78-209ENST00000474647 ANKRD26Q9UPS8 1709 aa19.62■□□□□ 0.73
CCDC78-209ENST00000474647 NBPF6Q5VWK0 638 aa19.62■□□□□ 0.73
CCDC78-209ENST00000474647 NBPF4Q96M43 638 aa19.62■□□□□ 0.73
CCDC78-209ENST00000474647 SLC24A1O60721 1099 aa19.61■□□□□ 0.73
CCDC78-209ENST00000474647 NLGN2Q8NFZ4 835 aa19.61■□□□□ 0.73
CCDC78-209ENST00000474647 RAPGEF4Q8WZA2 1011 aa19.61■□□□□ 0.73
CCDC78-209ENST00000474647 C4BP0C0L5 1744 aa19.61■□□□□ 0.73
CCDC78-209ENST00000474647 SENP3-EIF4A1A0A087X0R7 540 aa19.6■□□□□ 0.73
CCDC78-209ENST00000474647 TMF1P82094 1093 aa19.59■□□□□ 0.73
CCDC78-209ENST00000474647 CGNL1Q0VF96 1302 aa19.58■□□□□ 0.73
CCDC78-209ENST00000474647 FYB1O15117 783 aa19.58■□□□□ 0.72
CCDC78-209ENST00000474647 TATP17735 454 aaPredicted RBP19.58■□□□□ 0.72
CCDC78-209ENST00000474647 PCDH11XQ9BZA7 1347 aa19.57■□□□□ 0.72
CCDC78-209ENST00000474647 PCDH11YQ9BZA8 1340 aa19.57■□□□□ 0.72
CCDC78-209ENST00000474647 MSL1Q68DK7 614 aa19.57■□□□□ 0.72
CCDC78-209ENST00000474647 FLT4P35916 1363 aa19.57■□□□□ 0.72
CCDC78-209ENST00000474647 COL23A1Q86Y22 540 aaPredicted RBP19.56■□□□□ 0.72
CCDC78-209ENST00000474647 INSRP06213 1382 aa19.56■□□□□ 0.72
CCDC78-209ENST00000474647 C1QTNF8P60827 252 aa19.55■□□□□ 0.72
CCDC78-209ENST00000474647 HSP90AB2PQ58FF8 381 aa19.55■□□□□ 0.72
CCDC78-209ENST00000474647 PALLDQ8WX93 1383 aa19.55■□□□□ 0.72
CCDC78-209ENST00000474647 MPRIPQ6WCQ1 1025 aa19.53■□□□□ 0.72
CCDC78-209ENST00000474647 GIGYF1O75420 1035 aaPredicted RBP19.52■□□□□ 0.72
CCDC78-209ENST00000474647 NSD3Q9BZ95 1437 aa19.51■□□□□ 0.71
CCDC78-209ENST00000474647 YBX3P16989 372 aaKnown RBP eCLIP19.51■□□□□ 0.71
CCDC78-209ENST00000474647 KIF24Q5T7B8 1368 aa19.51■□□□□ 0.71
CCDC78-209ENST00000474647 CDCA8Q53HL2 280 aa19.5■□□□□ 0.71
CCDC78-209ENST00000474647 CEP350Q5VT06 3117 aa19.49■□□□□ 0.71
CCDC78-209ENST00000474647 PPM1GO15355 546 aaPredicted RBP19.49■□□□□ 0.71
CCDC78-209ENST00000474647 EMILIN1Q9Y6C2 1016 aa19.49■□□□□ 0.71
CCDC78-209ENST00000474647 CYP27B1O15528 508 aa19.48■□□□□ 0.71
CCDC78-209ENST00000474647 GRIN3BO60391 1043 aa19.48■□□□□ 0.71
CCDC78-209ENST00000474647 AK7Q96M32 723 aa19.48■□□□□ 0.71
CCDC78-209ENST00000474647 PHF14O94880 888 aa19.46■□□□□ 0.71
CCDC78-209ENST00000474647 FLAD1Q8NFF5 587 aa19.46■□□□□ 0.71
CCDC78-209ENST00000474647 N4BP2Q86UW6 1770 aaPredicted RBP19.45■□□□□ 0.7
CCDC78-209ENST00000474647 HMGB2P26583 209 aaKnown RBP19.45■□□□□ 0.7
CCDC78-209ENST00000474647 SMARCC1Q92922 1105 aaPredicted RBP19.45■□□□□ 0.7
CCDC78-209ENST00000474647 NCAPD2Q15021 1401 aa19.44■□□□□ 0.7
CCDC78-209ENST00000474647 CARD14Q9BXL6 1004 aa19.44■□□□□ 0.7
CCDC78-209ENST00000474647 ATP10DQ9P241 1426 aa19.43■□□□□ 0.7
CCDC78-209ENST00000474647 COL5A3P25940 1745 aaPredicted RBP19.43■□□□□ 0.7
CCDC78-209ENST00000474647 SPG7Q9UQ90 795 aa19.43■□□□□ 0.7
CCDC78-209ENST00000474647 CD2APQ9Y5K6 639 aa19.43■□□□□ 0.7
CCDC78-209ENST00000474647 VIRMAQ69YN4 1812 aaKnown RBP19.43■□□□□ 0.7
CCDC78-209ENST00000474647 KIF13BQ9NQT8 1826 aa19.43■□□□□ 0.7
CCDC78-209ENST00000474647 SMIM5Q71RC9 77 aa19.42■□□□□ 0.7
CCDC78-209ENST00000474647 AMIGO3Q86WK7 504 aa19.42■□□□□ 0.7
CCDC78-209ENST00000474647 PIGBQ92521 554 aa19.41■□□□□ 0.7
CCDC78-209ENST00000474647 WWC3Q9ULE0 1092 aa19.41■□□□□ 0.7
CCDC78-209ENST00000474647 C4AP0C0L4 1744 aa19.4■□□□□ 0.7
CCDC78-209ENST00000474647 KIAA1551Q9HCM1 1747 aa19.4■□□□□ 0.7
CCDC78-209ENST00000474647 TMOD3Q9NYL9 352 aa19.4■□□□□ 0.7
CCDC78-209ENST00000474647 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.39■□□□□ 0.69
CCDC78-209ENST00000474647 LINC00116Q8NCU8 138 aa19.39■□□□□ 0.69
CCDC78-209ENST00000474647 POLR3GLQ9BT43 218 aa19.39■□□□□ 0.69
CCDC78-209ENST00000474647 ZNF831Q5JPB2 1677 aa19.39■□□□□ 0.69
CCDC78-209ENST00000474647 LOC102724428A0A0B4J2F2 783 aa19.38■□□□□ 0.69
CCDC78-209ENST00000474647 SIK1P57059 783 aa19.38■□□□□ 0.69
CCDC78-209ENST00000474647 WASHC2AQ641Q2 1341 aa19.38■□□□□ 0.69
CCDC78-209ENST00000474647 IGSF1Q8N6C5 1336 aa19.38■□□□□ 0.69
CCDC78-209ENST00000474647 EYA1Q99502 592 aa19.38■□□□□ 0.69
CCDC78-209ENST00000474647 BRCA1P38398 1863 aaKnown RBP19.37■□□□□ 0.69
CCDC78-209ENST00000474647 SSFA2P28290 1259 aa19.37■□□□□ 0.69
CCDC78-209ENST00000474647 NKX1-1Q15270 411 aaPredicted RBP19.37■□□□□ 0.69
CCDC78-209ENST00000474647 ZNF526Q8TF50 670 aaPredicted RBP19.37■□□□□ 0.69
CCDC78-209ENST00000474647 GNPATO15228 680 aa19.36■□□□□ 0.69
CCDC78-209ENST00000474647 GPBP1L1Q9HC44 474 aaPredicted RBP19.36■□□□□ 0.69
CCDC78-209ENST00000474647 CICQ96RK0 1608 aaPredicted RBP19.36■□□□□ 0.69
CCDC78-209ENST00000474647 MYH14Q7Z406 1995 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms