RNA–Protein interactions for RNA: ENST00000474586.5

TRA2A-204, Transcript of transformer 2 alpha homolog, humanhuman

TSL 3

Gene TRA2A, Length 868 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-204ENST00000474586 FLT4P35916 1363 aa29.37■■■□□ 2.29
TRA2A-204ENST00000474586 ZBTB7AO95365 584 aa29.36■■■□□ 2.29
TRA2A-204ENST00000474586 EMILIN1Q9Y6C2 1016 aa29.35■■■□□ 2.29
TRA2A-204ENST00000474586 SHANK3Q9BYB0 1731 aa29.34■■■□□ 2.29
TRA2A-204ENST00000474586 PRIM1P49642 420 aaKnown RBP29.34■■■□□ 2.29
TRA2A-204ENST00000474586 EIF4G2P78344 907 aaKnown RBP eCLIP29.34■■■□□ 2.29
TRA2A-204ENST00000474586 SYTL4Q96C24 671 aaPredicted RBP29.34■■■□□ 2.29
TRA2A-204ENST00000474586 KIF24Q5T7B8 1368 aa29.34■■■□□ 2.29
TRA2A-204ENST00000474586 HSPA5P11021 654 aaKnown RBP29.33■■■□□ 2.29
TRA2A-204ENST00000474586 RAPGEF4Q8WZA2 1011 aa29.33■■■□□ 2.29
TRA2A-204ENST00000474586 LRRC4BQ9NT99 713 aa29.32■■■□□ 2.28
TRA2A-204ENST00000474586 CGNL1Q0VF96 1302 aa29.31■■■□□ 2.28
TRA2A-204ENST00000474586 ATF5Q9Y2D1 282 aaPredicted RBP29.31■■■□□ 2.28
TRA2A-204ENST00000474586 PPM1GO15355 546 aaPredicted RBP29.3■■■□□ 2.28
TRA2A-204ENST00000474586 TATP17735 454 aaPredicted RBP29.3■■■□□ 2.28
TRA2A-204ENST00000474586 DOT1LQ8TEK3 1739 aa29.3■■■□□ 2.28
TRA2A-204ENST00000474586 PAPPAQ13219 1627 aa29.3■■■□□ 2.28
TRA2A-204ENST00000474586 PTGER2P43116 358 aa29.27■■■□□ 2.28
TRA2A-204ENST00000474586 ZNF827Q17R98 1081 aa29.27■■■□□ 2.28
TRA2A-204ENST00000474586 NSD2O96028 1365 aa29.26■■■□□ 2.28
TRA2A-204ENST00000474586 SLC27A3Q5K4L6 730 aa29.25■■■□□ 2.27
TRA2A-204ENST00000474586 KCNQ4P56696 695 aa29.24■■■□□ 2.27
TRA2A-204ENST00000474586 MAP2P11137 1827 aaKnown RBP29.23■■■□□ 2.27
TRA2A-204ENST00000474586 MTFR1LQ9H019 292 aa29.23■■■□□ 2.27
TRA2A-204ENST00000474586 WASHC2AQ641Q2 1341 aa29.22■■■□□ 2.27
TRA2A-204ENST00000474586 POLKQ9UBT6 870 aa29.22■■■□□ 2.27
TRA2A-204ENST00000474586 ANKRD26Q9UPS8 1709 aa29.21■■■□□ 2.27
TRA2A-204ENST00000474586 TNNT2P45379 298 aaPredicted RBP29.21■■■□□ 2.27
TRA2A-204ENST00000474586 AKT1S1Q96B36 256 aa29.21■■■□□ 2.27
TRA2A-204ENST00000474586 PANK3Q9H999 370 aa29.21■■■□□ 2.27
TRA2A-204ENST00000474586 PCDH11XQ9BZA7 1347 aa29.2■■■□□ 2.27
TRA2A-204ENST00000474586 PCDH11YQ9BZA8 1340 aa29.2■■■□□ 2.27
TRA2A-204ENST00000474586 LY75O60449 1722 aa29.18■■■□□ 2.26
TRA2A-204ENST00000474586 CYP27B1O15528 508 aa29.18■■■□□ 2.26
TRA2A-204ENST00000474586 EYA1Q99502 592 aa29.17■■■□□ 2.26
TRA2A-204ENST00000474586 SGIP1Q9BQI5 828 aa29.17■■■□□ 2.26
TRA2A-204ENST00000474586 CCNL1Q9UK58 526 aaPredicted RBP29.16■■■□□ 2.26
TRA2A-204ENST00000474586 NCAPD2Q15021 1401 aa29.16■■■□□ 2.26
TRA2A-204ENST00000474586 DCAF8L1A6NGE4 600 aa29.13■■■□□ 2.25
TRA2A-204ENST00000474586 TFCP2L1Q9NZI6 479 aa29.13■■■□□ 2.25
TRA2A-204ENST00000474586 PKD1L3Q7Z443 1732 aa29.12■■■□□ 2.25
TRA2A-204ENST00000474586 MPRIPQ6WCQ1 1025 aa29.12■■■□□ 2.25
TRA2A-204ENST00000474586 FHDC1Q9C0D6 1143 aaPredicted RBP29.12■■■□□ 2.25
TRA2A-204ENST00000474586 PNPLA7Q6ZV29 1317 aa29.12■■■□□ 2.25
TRA2A-204ENST00000474586 EIF4A2Q14240 407 aaKnown RBP29.11■■■□□ 2.25
TRA2A-204ENST00000474586 SPG7Q9UQ90 795 aa29.11■■■□□ 2.25
TRA2A-204ENST00000474586 QSER1Q2KHR3 1735 aa29.1■■■□□ 2.25
TRA2A-204ENST00000474586 ARXQ96QS3 562 aa29.09■■■□□ 2.25
TRA2A-204ENST00000474586 SYT17Q9BSW7 474 aa29.09■■■□□ 2.25
TRA2A-204ENST00000474586 TUBGCP6Q96RT7 1819 aa29.08■■■□□ 2.25
TRA2A-204ENST00000474586 SLC16A10Q8TF71 515 aa29.08■■■□□ 2.25
TRA2A-204ENST00000474586 TOGARAM1Q9Y4F4 1720 aa29.08■■■□□ 2.25
TRA2A-204ENST00000474586 NKX1-1Q15270 411 aaPredicted RBP29.07■■■□□ 2.24
TRA2A-204ENST00000474586 PALLDQ8WX93 1383 aa29.05■■■□□ 2.24
TRA2A-204ENST00000474586 MORC1Q86VD1 984 aa29.05■■■□□ 2.24
TRA2A-204ENST00000474586 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.05■■■□□ 2.247e-10■■■■□ 23.6
TRA2A-204ENST00000474586 ITGB4P16144 1822 aa29.05■■■□□ 2.24
TRA2A-204ENST00000474586 YY1P25490 414 aa29.03■■■□□ 2.24
TRA2A-204ENST00000474586 PIGBQ92521 554 aa29.03■■■□□ 2.24
TRA2A-204ENST00000474586 KNSTRNQ9Y448 316 aa29.02■■■□□ 2.24
TRA2A-204ENST00000474586 SMARCC1Q92922 1105 aaPredicted RBP29.01■■■□□ 2.23
TRA2A-204ENST00000474586 MSH5O43196 834 aa29■■■□□ 2.23
TRA2A-204ENST00000474586 PHKG2P15735 406 aa29■■■□□ 2.23
TRA2A-204ENST00000474586 POLD1P28340 1107 aa29■■■□□ 2.23
TRA2A-204ENST00000474586 COL23A1Q86Y22 540 aaPredicted RBP29■■■□□ 2.23
TRA2A-204ENST00000474586 IFNL2Q8IZJ0 200 aa29■■■□□ 2.23
TRA2A-204ENST00000474586 C5P01031 1676 aa28.99■■■□□ 2.23
TRA2A-204ENST00000474586 IGSF1Q8N6C5 1336 aa28.99■■■□□ 2.23
TRA2A-204ENST00000474586 KIF7Q2M1P5 1343 aa28.98■■■□□ 2.23
TRA2A-204ENST00000474586 COL24A1Q17RW2 1714 aa28.97■■■□□ 2.23
TRA2A-204ENST00000474586 KLHL34Q8N239 644 aa28.96■■■□□ 2.23
TRA2A-204ENST00000474586 TMOD3Q9NYL9 352 aa28.96■■■□□ 2.23
TRA2A-204ENST00000474586 MAP3K5Q99683 1374 aa28.96■■■□□ 2.23
TRA2A-204ENST00000474586 TAF1LQ8IZX4 1826 aa28.96■■■□□ 2.23
TRA2A-204ENST00000474586 HMGB2P26583 209 aaKnown RBP28.94■■■□□ 2.22
TRA2A-204ENST00000474586 AMER1Q5JTC6 1135 aaPredicted RBP28.93■■■□□ 2.22
TRA2A-204ENST00000474586 ASAP1Q9ULH1 1129 aa28.92■■■□□ 2.22
TRA2A-204ENST00000474586 PLEKHO1Q53GL0 409 aaPredicted RBP28.91■■■□□ 2.22
TRA2A-204ENST00000474586 AEBP1Q8IUX7 1158 aa28.91■■■□□ 2.22
TRA2A-204ENST00000474586 PLEKHG2Q9H7P9 1386 aa28.9■■■□□ 2.22
TRA2A-204ENST00000474586 LOC102724428A0A0B4J2F2 783 aa28.9■■■□□ 2.22
TRA2A-204ENST00000474586 C4BP0C0L5 1744 aa28.9■■■□□ 2.22
TRA2A-204ENST00000474586 SIK1P57059 783 aa28.9■■■□□ 2.22
TRA2A-204ENST00000474586 MSL1Q68DK7 614 aa28.9■■■□□ 2.22
TRA2A-204ENST00000474586 FLAD1Q8NFF5 587 aa28.89■■■□□ 2.22
TRA2A-204ENST00000474586 AK7Q96M32 723 aa28.89■■■□□ 2.22
TRA2A-204ENST00000474586 ATG3Q9NT62 314 aa28.88■■■□□ 2.21
TRA2A-204ENST00000474586 ZNF530Q6P9A1 599 aaPredicted RBP28.87■■■□□ 2.21
TRA2A-204ENST00000474586 SMIM5Q71RC9 77 aa28.87■■■□□ 2.21
TRA2A-204ENST00000474586 AMIGO3Q86WK7 504 aa28.87■■■□□ 2.21
TRA2A-204ENST00000474586 LINC00116Q8NCU8 138 aa28.87■■■□□ 2.21
TRA2A-204ENST00000474586 IL13P35225 146 aa28.86■■■□□ 2.21
TRA2A-204ENST00000474586 SULT6B1Q6IMI4 303 aa28.86■■■□□ 2.21
TRA2A-204ENST00000474586 HSP90AB1P08238 724 aaKnown RBP28.85■■■□□ 2.21
TRA2A-204ENST00000474586 AMOTQ4VCS5 1084 aa28.85■■■□□ 2.21
TRA2A-204ENST00000474586 DCAF5Q96JK2 942 aa28.85■■■□□ 2.21
TRA2A-204ENST00000474586 ERVV-2B6SEH9 535 aa28.84■■■□□ 2.21
TRA2A-204ENST00000474586 PER1O15534 1290 aaPredicted RBP28.84■■■□□ 2.21
TRA2A-204ENST00000474586 PHF14O94880 888 aa28.84■■■□□ 2.21
TRA2A-204ENST00000474586 ATP6V1AP38606 617 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms