RNA–Protein interactions for RNA: ENST00000474377.5

SSR2-208, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 5

Gene SSR2, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-208ENST00000474377 CNGB1Q14028 1251 aaPredicted RBP11.98□□□□□ -0.49
SSR2-208ENST00000474377 CARD14Q9BXL6 1004 aa11.98□□□□□ -0.49
SSR2-208ENST00000474377 PANK3Q9H999 370 aa11.98□□□□□ -0.49
SSR2-208ENST00000474377 MAP2P11137 1827 aaKnown RBP11.97□□□□□ -0.49
SSR2-208ENST00000474377 ABCB7O75027 752 aa11.97□□□□□ -0.49
SSR2-208ENST00000474377 HOXC9P31274 260 aa11.97□□□□□ -0.49
SSR2-208ENST00000474377 RREB1Q92766 1687 aa11.97□□□□□ -0.49
SSR2-208ENST00000474377 TNS2Q63HR2 1409 aa11.96□□□□□ -0.49
SSR2-208ENST00000474377 APBA3O96018 575 aa11.96□□□□□ -0.49
SSR2-208ENST00000474377 EN1Q05925 392 aaPredicted RBP11.96□□□□□ -0.49
SSR2-208ENST00000474377 NSD2O96028 1365 aa11.95□□□□□ -0.5
SSR2-208ENST00000474377 FLT4P35916 1363 aa11.95□□□□□ -0.5
SSR2-208ENST00000474377 KIF7Q2M1P5 1343 aa11.95□□□□□ -0.5
SSR2-208ENST00000474377 PPP1R1BQ9UD71 204 aaPredicted RBP11.95□□□□□ -0.5
SSR2-208ENST00000474377 PSDA5PKW4 1024 aaPredicted RBP11.94□□□□□ -0.5
SSR2-208ENST00000474377 C1QBPQ07021 282 aaKnown RBP11.94□□□□□ -0.5
SSR2-208ENST00000474377 BCL11BQ9C0K0 894 aaPredicted RBP11.94□□□□□ -0.5
SSR2-208ENST00000474377 KNSTRNQ9Y448 316 aa11.94□□□□□ -0.5
SSR2-208ENST00000474377 INSRP06213 1382 aa11.93□□□□□ -0.5
SSR2-208ENST00000474377 R3HDM1Q15032 1099 aaKnown RBP11.93□□□□□ -0.5
SSR2-208ENST00000474377 USHBP1Q8N6Y0 703 aa11.93□□□□□ -0.5
SSR2-208ENST00000474377 CAMKK2Q96RR4 588 aa11.93□□□□□ -0.5
SSR2-208ENST00000474377 EMILIN1Q9Y6C2 1016 aa11.93□□□□□ -0.5
SSR2-208ENST00000474377 NUP188Q5SRE5 1749 aa11.93□□□□□ -0.5
SSR2-208ENST00000474377 PEAK1Q9H792 1746 aa11.93□□□□□ -0.5
SSR2-208ENST00000474377 PLSCR1O15162 318 aa11.92□□□□□ -0.5
SSR2-208ENST00000474377 VASPP50552 380 aaPredicted RBP11.92□□□□□ -0.5
SSR2-208ENST00000474377 MARCH10Q8NA82 808 aaPredicted RBP11.92□□□□□ -0.5
SSR2-208ENST00000474377 SBF2Q86WG5 1849 aa11.92□□□□□ -0.5
SSR2-208ENST00000474377 HMGB2P26583 209 aaKnown RBP11.91□□□□□ -0.5
SSR2-208ENST00000474377 HSP90AB2PQ58FF8 381 aa11.91□□□□□ -0.5
SSR2-208ENST00000474377 MORC1Q86VD1 984 aa11.91□□□□□ -0.5
SSR2-208ENST00000474377 RAPGEF4Q8WZA2 1011 aa11.91□□□□□ -0.5
SSR2-208ENST00000474377 SPON1Q9HCB6 807 aa11.91□□□□□ -0.5
SSR2-208ENST00000474377 ZBTB12Q9Y330 459 aaPredicted RBP11.91□□□□□ -0.5
SSR2-208ENST00000474377 EZH2Q15910 746 aaKnown RBP11.9□□□□□ -0.5
SSR2-208ENST00000474377 CC2D1BQ5T0F9 858 aaKnown RBP11.89□□□□□ -0.51
SSR2-208ENST00000474377 DDX54Q8TDD1 881 aaKnown RBP11.89□□□□□ -0.51
SSR2-208ENST00000474377 WASHC2AQ641Q2 1341 aa11.88□□□□□ -0.51
SSR2-208ENST00000474377 TATP17735 454 aaPredicted RBP11.88□□□□□ -0.51
SSR2-208ENST00000474377 ZCRB1Q8TBF4 217 aaKnown RBP11.88□□□□□ -0.51
SSR2-208ENST00000474377 ACSBG1Q96GR2 724 aa11.88□□□□□ -0.51
SSR2-208ENST00000474377 NBPF6Q5VWK0 638 aa11.87□□□□□ -0.51
SSR2-208ENST00000474377 PROM2Q8N271 834 aa11.87□□□□□ -0.51
SSR2-208ENST00000474377 NBPF4Q96M43 638 aa11.87□□□□□ -0.51
SSR2-208ENST00000474377 PLEKHG2Q9H7P9 1386 aa11.87□□□□□ -0.51
SSR2-208ENST00000474377 POLKQ9UBT6 870 aa11.86□□□□□ -0.51
SSR2-208ENST00000474377 DOT1LQ8TEK3 1739 aa11.86□□□□□ -0.51
SSR2-208ENST00000474377 MEGF6O75095 1541 aa11.86□□□□□ -0.51
SSR2-208ENST00000474377 PCDH11XQ9BZA7 1347 aa11.86□□□□□ -0.51
SSR2-208ENST00000474377 PCDH11YQ9BZA8 1340 aa11.86□□□□□ -0.51
SSR2-208ENST00000474377 SYTL4Q96C24 671 aaPredicted RBP11.85□□□□□ -0.51
SSR2-208ENST00000474377 NHSQ6T4R5 1651 aa11.84□□□□□ -0.51
SSR2-208ENST00000474377 KCNQ2O43526 872 aa11.84□□□□□ -0.51
SSR2-208ENST00000474377 BTAF1O14981 1849 aa11.83□□□□□ -0.51
SSR2-208ENST00000474377 SHANK3Q9BYB0 1731 aa11.83□□□□□ -0.52
SSR2-208ENST00000474377 YY1P25490 414 aa11.83□□□□□ -0.52
SSR2-208ENST00000474377 TXNRD1Q16881 649 aa11.83□□□□□ -0.52
SSR2-208ENST00000474377 STK32BQ9NY57 414 aa11.83□□□□□ -0.52
SSR2-208ENST00000474377 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.83□□□□□ -0.52
SSR2-208ENST00000474377 SPG7Q9UQ90 795 aa11.83□□□□□ -0.52
SSR2-208ENST00000474377 CHD4Q14839 1912 aa11.83□□□□□ -0.52
SSR2-208ENST00000474377 EIF4A2Q14240 407 aaKnown RBP11.82□□□□□ -0.52
SSR2-208ENST00000474377 PTF1AQ7RTS3 328 aa11.82□□□□□ -0.52
SSR2-208ENST00000474377 NCAPD2Q15021 1401 aa11.82□□□□□ -0.52
SSR2-208ENST00000474377 NPC1L1Q9UHC9 1359 aa11.81□□□□□ -0.52
SSR2-208ENST00000474377 SLC27A3Q5K4L6 730 aa11.81□□□□□ -0.52
SSR2-208ENST00000474377 EYA1Q99502 592 aa11.81□□□□□ -0.52
SSR2-208ENST00000474377 PRIM1P49642 420 aaKnown RBP11.79□□□□□ -0.52
SSR2-208ENST00000474377 POTEDQ86YR6 584 aa11.79□□□□□ -0.52
SSR2-208ENST00000474377 PKD1L3Q7Z443 1732 aa11.79□□□□□ -0.52
SSR2-208ENST00000474377 IGSF1Q8N6C5 1336 aa11.79□□□□□ -0.52
SSR2-208ENST00000474377 CASZ1Q86V15 1759 aa11.79□□□□□ -0.52
SSR2-208ENST00000474377 PER1O15534 1290 aaPredicted RBP11.78□□□□□ -0.52
SSR2-208ENST00000474377 MTHFSP49914 203 aa11.78□□□□□ -0.52
SSR2-208ENST00000474377 IFNLR1Q8IU57 520 aaPredicted RBP11.78□□□□□ -0.52
SSR2-208ENST00000474377 HSP90AB1P08238 724 aaKnown RBP11.77□□□□□ -0.53
SSR2-208ENST00000474377 SLC15A2Q16348 729 aa11.77□□□□□ -0.53
SSR2-208ENST00000474377 AMOTQ4VCS5 1084 aa11.77□□□□□ -0.53
SSR2-208ENST00000474377 IFNL2Q8IZJ0 200 aa11.77□□□□□ -0.53
SSR2-208ENST00000474377 ITGB4P16144 1822 aa11.76□□□□□ -0.53
SSR2-208ENST00000474377 CYP27B1O15528 508 aa11.76□□□□□ -0.53
SSR2-208ENST00000474377 NKX1-1Q15270 411 aaPredicted RBP11.76□□□□□ -0.53
SSR2-208ENST00000474377 PLEKHO1Q53GL0 409 aaPredicted RBP11.76□□□□□ -0.53
SSR2-208ENST00000474377 SULT6B1Q6IMI4 303 aa11.76□□□□□ -0.53
SSR2-208ENST00000474377 SMARCC1Q92922 1105 aaPredicted RBP11.76□□□□□ -0.53
SSR2-208ENST00000474377 MTFR1LQ9H019 292 aa11.76□□□□□ -0.53
SSR2-208ENST00000474377 ANO8Q9HCE9 1232 aaPredicted RBP11.76□□□□□ -0.53
SSR2-208ENST00000474377 QSER1Q2KHR3 1735 aa11.75□□□□□ -0.53
SSR2-208ENST00000474377 U2SURPO15042 1029 aaKnown RBP11.75□□□□□ -0.53
SSR2-208ENST00000474377 ZEB1P37275 1124 aaPredicted RBP11.75□□□□□ -0.53
SSR2-208ENST00000474377 MPRIPQ6WCQ1 1025 aa11.75□□□□□ -0.53
SSR2-208ENST00000474377 AEBP1Q8IUX7 1158 aa11.75□□□□□ -0.53
SSR2-208ENST00000474377 TOGARAM1Q9Y4F4 1720 aa11.74□□□□□ -0.53
SSR2-208ENST00000474377 DIAPH1O60610 1272 aaKnown RBP11.74□□□□□ -0.53
SSR2-208ENST00000474377 HMOX1P09601 288 aa11.74□□□□□ -0.53
SSR2-208ENST00000474377 ZNF530Q6P9A1 599 aaPredicted RBP11.74□□□□□ -0.53
SSR2-208ENST00000474377 CFAP53Q96M91 514 aa11.74□□□□□ -0.53
SSR2-208ENST00000474377 PHKG2P15735 406 aa11.73□□□□□ -0.53
SSR2-208ENST00000474377 POLD1P28340 1107 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms