RNA–Protein interactions for RNA: ENST00000474326.1

PFDN4-203, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 191 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-203ENST00000474326 RREB1Q92766 1687 aa22.74■■□□□ 1.23
PFDN4-203ENST00000474326 PCDH11XQ9BZA7 1347 aa22.73■■□□□ 1.23
PFDN4-203ENST00000474326 PCDH11YQ9BZA8 1340 aa22.73■■□□□ 1.23
PFDN4-203ENST00000474326 PSDA5PKW4 1024 aaPredicted RBP22.72■■□□□ 1.23
PFDN4-203ENST00000474326 AMER1Q5JTC6 1135 aaPredicted RBP22.72■■□□□ 1.23
PFDN4-203ENST00000474326 SYTL4Q96C24 671 aaPredicted RBP22.71■■□□□ 1.23
PFDN4-203ENST00000474326 NUP188Q5SRE5 1749 aa22.71■■□□□ 1.23
PFDN4-203ENST00000474326 R3HDM1Q15032 1099 aaKnown RBP22.7■■□□□ 1.22
PFDN4-203ENST00000474326 KCNQ2O43526 872 aa22.69■■□□□ 1.22
PFDN4-203ENST00000474326 EIF4A2Q14240 407 aaKnown RBP22.69■■□□□ 1.22
PFDN4-203ENST00000474326 CC2D1BQ5T0F9 858 aaKnown RBP22.69■■□□□ 1.22
PFDN4-203ENST00000474326 SPG7Q9UQ90 795 aa22.69■■□□□ 1.22
PFDN4-203ENST00000474326 PTF1AQ7RTS3 328 aa22.68■■□□□ 1.22
PFDN4-203ENST00000474326 EYA1Q99502 592 aa22.68■■□□□ 1.22
PFDN4-203ENST00000474326 DOT1LQ8TEK3 1739 aa22.66■■□□□ 1.22
PFDN4-203ENST00000474326 SHANK3Q9BYB0 1731 aa22.66■■□□□ 1.22
PFDN4-203ENST00000474326 PER1O15534 1290 aaPredicted RBP22.66■■□□□ 1.22
PFDN4-203ENST00000474326 KAT6BQ8WYB5 2073 aa22.66■■□□□ 1.22
PFDN4-203ENST00000474326 NCAPD2Q15021 1401 aa22.65■■□□□ 1.22
PFDN4-203ENST00000474326 CNGB1Q14028 1251 aaPredicted RBP22.65■■□□□ 1.22
PFDN4-203ENST00000474326 BTAF1O14981 1849 aa22.65■■□□□ 1.22
PFDN4-203ENST00000474326 NPC1L1Q9UHC9 1359 aa22.64■■□□□ 1.22
PFDN4-203ENST00000474326 TXNRD1Q16881 649 aa22.64■■□□□ 1.21
PFDN4-203ENST00000474326 PKD1L3Q7Z443 1732 aa22.63■■□□□ 1.21
PFDN4-203ENST00000474326 PRIM1P49642 420 aaKnown RBP22.63■■□□□ 1.21
PFDN4-203ENST00000474326 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.63■■□□□ 1.213e-22■■■■□ 23.7
PFDN4-203ENST00000474326 PLEKHG2Q9H7P9 1386 aa22.63■■□□□ 1.21
PFDN4-203ENST00000474326 IGSF1Q8N6C5 1336 aa22.62■■□□□ 1.21
PFDN4-203ENST00000474326 MTHFSP49914 203 aa22.61■■□□□ 1.21
PFDN4-203ENST00000474326 STK32BQ9NY57 414 aa22.61■■□□□ 1.21
PFDN4-203ENST00000474326 IFNL2Q8IZJ0 200 aa22.58■■□□□ 1.21
PFDN4-203ENST00000474326 CYP27B1O15528 508 aa22.57■■□□□ 1.2
PFDN4-203ENST00000474326 HMGB2P26583 209 aaKnown RBP22.57■■□□□ 1.2
PFDN4-203ENST00000474326 PLEKHO1Q53GL0 409 aaPredicted RBP22.57■■□□□ 1.2
PFDN4-203ENST00000474326 SLC27A3Q5K4L6 730 aa22.57■■□□□ 1.2
PFDN4-203ENST00000474326 LRP5O75197 1615 aa22.57■■□□□ 1.2
PFDN4-203ENST00000474326 AMOTQ4VCS5 1084 aa22.56■■□□□ 1.2
PFDN4-203ENST00000474326 PROM2Q8N271 834 aa22.56■■□□□ 1.2
PFDN4-203ENST00000474326 DIAPH1O60610 1272 aaKnown RBP22.55■■□□□ 1.2
PFDN4-203ENST00000474326 SULT6B1Q6IMI4 303 aa22.55■■□□□ 1.2
PFDN4-203ENST00000474326 HSP90AB1P08238 724 aaKnown RBP22.54■■□□□ 1.2
PFDN4-203ENST00000474326 IL13P35225 146 aa22.54■■□□□ 1.2
PFDN4-203ENST00000474326 MPRIPQ6WCQ1 1025 aa22.54■■□□□ 1.2
PFDN4-203ENST00000474326 CFAP53Q96M91 514 aa22.54■■□□□ 1.2
PFDN4-203ENST00000474326 PHKG2P15735 406 aa22.53■■□□□ 1.2
PFDN4-203ENST00000474326 NKX1-1Q15270 411 aaPredicted RBP22.52■■□□□ 1.2
PFDN4-203ENST00000474326 SLC15A2Q16348 729 aa22.52■■□□□ 1.2
PFDN4-203ENST00000474326 C1orf141Q5JVX7 400 aa22.52■■□□□ 1.2
PFDN4-203ENST00000474326 ANO8Q9HCE9 1232 aaPredicted RBP22.52■■□□□ 1.2
PFDN4-203ENST00000474326 ZEB1P37275 1124 aaPredicted RBP22.51■■□□□ 1.19
PFDN4-203ENST00000474326 ZNF530Q6P9A1 599 aaPredicted RBP22.51■■□□□ 1.19
PFDN4-203ENST00000474326 SMARCC1Q92922 1105 aaPredicted RBP22.51■■□□□ 1.19
PFDN4-203ENST00000474326 TMOD3Q9NYL9 352 aa22.51■■□□□ 1.19
PFDN4-203ENST00000474326 AEBP1Q8IUX7 1158 aa22.5■■□□□ 1.19
PFDN4-203ENST00000474326 CCNL1Q9UK58 526 aaPredicted RBP22.5■■□□□ 1.19
PFDN4-203ENST00000474326 SPON1Q9HCB6 807 aa22.49■■□□□ 1.19
PFDN4-203ENST00000474326 KDRP35968 1356 aa22.49■■□□□ 1.19
PFDN4-203ENST00000474326 LY75O60449 1722 aa22.48■■□□□ 1.19
PFDN4-203ENST00000474326 TOGARAM1Q9Y4F4 1720 aa22.48■■□□□ 1.19
PFDN4-203ENST00000474326 U2SURPO15042 1029 aaKnown RBP22.47■■□□□ 1.19
PFDN4-203ENST00000474326 DCAF5Q96JK2 942 aa22.47■■□□□ 1.19
PFDN4-203ENST00000474326 ITGB4P16144 1822 aa22.47■■□□□ 1.19
PFDN4-203ENST00000474326 PALLDQ8WX93 1383 aa22.47■■□□□ 1.19
PFDN4-203ENST00000474326 LRRC4BQ9NT99 713 aa22.46■■□□□ 1.19
PFDN4-203ENST00000474326 PPP1R1BQ9UD71 204 aaPredicted RBP22.46■■□□□ 1.19
PFDN4-203ENST00000474326 PAPPAQ13219 1627 aa22.46■■□□□ 1.19
PFDN4-203ENST00000474326 HMOX1P09601 288 aa22.45■■□□□ 1.18
PFDN4-203ENST00000474326 NUDCQ9Y266 331 aa22.45■■□□□ 1.18
PFDN4-203ENST00000474326 PIGBQ92521 554 aa22.44■■□□□ 1.18
PFDN4-203ENST00000474326 TFCP2L1Q9NZI6 479 aa22.44■■□□□ 1.18
PFDN4-203ENST00000474326 ERVV-2B6SEH9 535 aa22.43■■□□□ 1.18
PFDN4-203ENST00000474326 CASZ1Q86V15 1759 aa22.42■■□□□ 1.18
PFDN4-203ENST00000474326 PPP2R1AP30153 589 aa22.41■■□□□ 1.18
PFDN4-203ENST00000474326 KCNQ4P56696 695 aa22.41■■□□□ 1.18
PFDN4-203ENST00000474326 CABP4P57796 275 aa22.41■■□□□ 1.18
PFDN4-203ENST00000474326 ZBTB7AO95365 584 aa22.4■■□□□ 1.18
PFDN4-203ENST00000474326 ZNF827Q17R98 1081 aa22.4■■□□□ 1.18
PFDN4-203ENST00000474326 AKAP4Q5JQC9 854 aa22.4■■□□□ 1.18
PFDN4-203ENST00000474326 COL3A1P02461 1466 aaPredicted RBP22.4■■□□□ 1.18
PFDN4-203ENST00000474326 AKT1S1Q96B36 256 aa22.39■■□□□ 1.17
PFDN4-203ENST00000474326 MTFR1LQ9H019 292 aa22.39■■□□□ 1.17
PFDN4-203ENST00000474326 C5P01031 1676 aa22.39■■□□□ 1.17
PFDN4-203ENST00000474326 MSH5O43196 834 aa22.37■■□□□ 1.17
PFDN4-203ENST00000474326 QSER1Q2KHR3 1735 aa22.37■■□□□ 1.17
PFDN4-203ENST00000474326 SRCAPQ6ZRS2 3230 aa22.36■■□□□ 1.17
PFDN4-203ENST00000474326 LOC102724428A0A0B4J2F2 783 aa22.36■■□□□ 1.17
PFDN4-203ENST00000474326 SIK1P57059 783 aa22.36■■□□□ 1.17
PFDN4-203ENST00000474326 AK7Q96M32 723 aa22.36■■□□□ 1.17
PFDN4-203ENST00000474326 KDM6AO15550 1401 aaPredicted RBP22.36■■□□□ 1.17
PFDN4-203ENST00000474326 DDX10Q13206 875 aaKnown RBP22.35■■□□□ 1.17
PFDN4-203ENST00000474326 SLC16A10Q8TF71 515 aa22.35■■□□□ 1.17
PFDN4-203ENST00000474326 PDGFDQ9GZP0 370 aaPredicted RBP22.35■■□□□ 1.17
PFDN4-203ENST00000474326 ASAP1Q9ULH1 1129 aa22.35■■□□□ 1.17
PFDN4-203ENST00000474326 ATF5Q9Y2D1 282 aaPredicted RBP22.35■■□□□ 1.17
PFDN4-203ENST00000474326 U2AF1L5P0DN76 240 aaPredicted RBP22.34■■□□□ 1.17
PFDN4-203ENST00000474326 U2AF1Q01081 240 aaKnown RBP eCLIP22.34■■□□□ 1.17
PFDN4-203ENST00000474326 FLAD1Q8NFF5 587 aa22.34■■□□□ 1.17
PFDN4-203ENST00000474326 GAS2L2Q8NHY3 880 aa22.34■■□□□ 1.17
PFDN4-203ENST00000474326 NEFMP07197 916 aa22.33■■□□□ 1.17
PFDN4-203ENST00000474326 ATP6V1AP38606 617 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms