RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 LMBRD1Q9NUN5 540 aa17.91■□□□□ 0.46
SAMM50-203ENST00000474323 CCDC39Q9UFE4 941 aa17.9■□□□□ 0.46
SAMM50-203ENST00000474323 AMOTL2Q9Y2J4 779 aa17.9■□□□□ 0.46
SAMM50-203ENST00000474323 TBX22Q9Y458 520 aa17.9■□□□□ 0.46
SAMM50-203ENST00000474323 SETD1BQ9UPS6 1966 aaKnown RBP17.9■□□□□ 0.46
SAMM50-203ENST00000474323 BRD2P25440 801 aaKnown RBP17.9■□□□□ 0.46
SAMM50-203ENST00000474323 MCTP1Q6DN14 999 aa17.9■□□□□ 0.46
SAMM50-203ENST00000474323 HDGFL2Q7Z4V5 671 aaPredicted RBP17.9■□□□□ 0.46
SAMM50-203ENST00000474323 CCDC94Q9BW85 323 aaPredicted RBP17.9■□□□□ 0.46
SAMM50-203ENST00000474323 CFAP53Q96M91 514 aa17.89■□□□□ 0.45
SAMM50-203ENST00000474323 NCLP19338 710 aaKnown RBP17.89■□□□□ 0.45
SAMM50-203ENST00000474323 PRIM1P49642 420 aaKnown RBP17.89■□□□□ 0.45
SAMM50-203ENST00000474323 FGD1P98174 961 aa17.89■□□□□ 0.45
SAMM50-203ENST00000474323 NCKAP5LQ9HCH0 1330 aa17.88■□□□□ 0.45
SAMM50-203ENST00000474323 SSH1Q8WYL5 1049 aa17.88■□□□□ 0.45
SAMM50-203ENST00000474323 GGNBP2Q9H3C7 697 aa17.88■□□□□ 0.45
SAMM50-203ENST00000474323 CYP2E1P05181 493 aaPredicted RBP17.88■□□□□ 0.45
SAMM50-203ENST00000474323 DMTNQ08495 405 aa17.88■□□□□ 0.45
SAMM50-203ENST00000474323 TMEM57Q8N5G2 664 aa17.88■□□□□ 0.45
SAMM50-203ENST00000474323 RBM42Q9BTD8 480 aaKnown RBP17.88■□□□□ 0.45
SAMM50-203ENST00000474323 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.88■□□□□ 0.45
SAMM50-203ENST00000474323 TBC1D9Q6ZT07 1266 aa17.87■□□□□ 0.45
SAMM50-203ENST00000474323 NUDT16Q96DE0 195 aaKnown RBP17.87■□□□□ 0.45
SAMM50-203ENST00000474323 IPO8O15397 1037 aaKnown RBP17.87■□□□□ 0.45
SAMM50-203ENST00000474323 EXOSC9Q06265 439 aaKnown RBP17.87■□□□□ 0.45
SAMM50-203ENST00000474323 NOB1Q9ULX3 412 aaKnown RBP17.87■□□□□ 0.45
SAMM50-203ENST00000474323 NSD2O96028 1365 aa17.87■□□□□ 0.45
SAMM50-203ENST00000474323 ZNF142P52746 1687 aaPredicted RBP17.87■□□□□ 0.45
SAMM50-203ENST00000474323 PPIP5K1Q6PFW1 1433 aa17.86■□□□□ 0.45
SAMM50-203ENST00000474323 NUTM2FA1L443 756 aa17.86■□□□□ 0.45
SAMM50-203ENST00000474323 MTHFSP49914 203 aa17.86■□□□□ 0.45
SAMM50-203ENST00000474323 FYB1O15117 783 aa17.85■□□□□ 0.45
SAMM50-203ENST00000474323 RABEP1Q15276 862 aa17.85■□□□□ 0.45
SAMM50-203ENST00000474323 ANKLE2Q86XL3 938 aa17.85■□□□□ 0.45
SAMM50-203ENST00000474323 GCC1Q96CN9 775 aa17.85■□□□□ 0.45
SAMM50-203ENST00000474323 CWC22Q9HCG8 908 aaKnown RBP17.85■□□□□ 0.45
SAMM50-203ENST00000474323 DIP2AQ14689 1571 aa17.85■□□□□ 0.45
SAMM50-203ENST00000474323 LRSAM1Q6UWE0 723 aa17.84■□□□□ 0.45
SAMM50-203ENST00000474323 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.84■□□□□ 0.45
SAMM50-203ENST00000474323 TSR2Q969E8 191 aaKnown RBP17.84■□□□□ 0.45
SAMM50-203ENST00000474323 ADGRB2O60241 1585 aa17.84■□□□□ 0.45
SAMM50-203ENST00000474323 ATP7BP35670 1465 aa17.84■□□□□ 0.45
SAMM50-203ENST00000474323 CCDC61Q9Y6R9 512 aa17.83■□□□□ 0.45
SAMM50-203ENST00000474323 PRR36Q9H6K5 1346 aa17.83■□□□□ 0.45
SAMM50-203ENST00000474323 ZSCAN20P17040 1043 aaPredicted RBP17.83■□□□□ 0.44
SAMM50-203ENST00000474323 MYRIPQ8NFW9 859 aa17.83■□□□□ 0.44
SAMM50-203ENST00000474323 CFAP44Q96MT7 982 aa17.83■□□□□ 0.44
SAMM50-203ENST00000474323 A0A0U1RQG5 324 aaPredicted RBP17.82■□□□□ 0.44
SAMM50-203ENST00000474323 ANKRD45Q5TZF3 282 aa17.82■□□□□ 0.44
SAMM50-203ENST00000474323 AK9Q5TCS8 1911 aa17.81■□□□□ 0.44
SAMM50-203ENST00000474323 ZHX1Q9UKY1 873 aaPredicted RBP17.81■□□□□ 0.44
SAMM50-203ENST00000474323 IL16Q14005 1332 aa17.81■□□□□ 0.44
SAMM50-203ENST00000474323 CDC45O75419 566 aa17.81■□□□□ 0.44
SAMM50-203ENST00000474323 U2AF1L5P0DN76 240 aaPredicted RBP17.81■□□□□ 0.44
SAMM50-203ENST00000474323 KCNA6P17658 529 aa17.81■□□□□ 0.44
SAMM50-203ENST00000474323 U2AF1Q01081 240 aaKnown RBP eCLIP17.81■□□□□ 0.44
SAMM50-203ENST00000474323 GPT2Q8TD30 523 aa17.81■□□□□ 0.44
SAMM50-203ENST00000474323 CNKSR2Q8WXI2 1034 aa17.81■□□□□ 0.44
SAMM50-203ENST00000474323 PRDM10Q9NQV6 1147 aa17.81■□□□□ 0.44
SAMM50-203ENST00000474323 PTCH1Q13635 1447 aa17.81■□□□□ 0.44
SAMM50-203ENST00000474323 KIF20BQ96Q89 1820 aa17.8■□□□□ 0.44
SAMM50-203ENST00000474323 PRPF40AO75400 957 aaKnown RBP17.8■□□□□ 0.44
SAMM50-203ENST00000474323 ARID3AQ99856 593 aa17.8■□□□□ 0.44
SAMM50-203ENST00000474323 CHMP4BQ9H444 224 aaKnown RBP17.8■□□□□ 0.44
SAMM50-203ENST00000474323 ANKRD26Q9UPS8 1709 aa17.8■□□□□ 0.44
SAMM50-203ENST00000474323 KIAA2012Q0VF49 1180 aa17.8■□□□□ 0.44
SAMM50-203ENST00000474323 PRIMPOLQ96LW4 560 aa17.8■□□□□ 0.44
SAMM50-203ENST00000474323 GTPBP4Q9BZE4 634 aaKnown RBP17.8■□□□□ 0.44
SAMM50-203ENST00000474323 XRN1Q8IZH2 1706 aaKnown RBP17.79■□□□□ 0.44
SAMM50-203ENST00000474323 CPSF1Q10570 1443 aaKnown RBP17.79■□□□□ 0.44
SAMM50-203ENST00000474323 HMGN5P82970 282 aaKnown RBP17.78■□□□□ 0.44
SAMM50-203ENST00000474323 ALDH1L2Q3SY69 923 aa17.78■□□□□ 0.44
SAMM50-203ENST00000474323 CDC42BPGQ6DT37 1551 aa17.78■□□□□ 0.44
SAMM50-203ENST00000474323 RBM27Q9P2N5 1060 aaKnown RBP17.77■□□□□ 0.44
SAMM50-203ENST00000474323 KIF20AO95235 890 aa17.77■□□□□ 0.44
SAMM50-203ENST00000474323 GTF2F1P35269 517 aaKnown RBP eCLIP17.77■□□□□ 0.443e-7■■■■■ 29.2
SAMM50-203ENST00000474323 TMEM63CQ9P1W3 806 aa17.77■□□□□ 0.44
SAMM50-203ENST00000474323 ITSN1Q15811 1721 aa17.76■□□□□ 0.43
SAMM50-203ENST00000474323 SYCE3A1L190 88 aa17.76■□□□□ 0.43
SAMM50-203ENST00000474323 MBD3O95983 291 aa17.76■□□□□ 0.43
SAMM50-203ENST00000474323 TMPOP42166 694 aaKnown RBP17.76■□□□□ 0.43
SAMM50-203ENST00000474323 TRIM35Q9UPQ4 493 aa17.76■□□□□ 0.43
SAMM50-203ENST00000474323 EDC4Q6P2E9 1401 aaKnown RBP17.76■□□□□ 0.43
SAMM50-203ENST00000474323 PIK3R4Q99570 1358 aa17.76■□□□□ 0.43
SAMM50-203ENST00000474323 PKP1Q13835 747 aa17.75■□□□□ 0.43
SAMM50-203ENST00000474323 NME9Q86XW9 330 aa17.75■□□□□ 0.43
SAMM50-203ENST00000474323 BRPF1P55201 1214 aaPredicted RBP17.75■□□□□ 0.43
SAMM50-203ENST00000474323 MON2Q7Z3U7 1717 aa17.74■□□□□ 0.43
SAMM50-203ENST00000474323 ZBTB7BO15156 539 aaPredicted RBP17.74■□□□□ 0.43
SAMM50-203ENST00000474323 PTMAP06454 111 aaKnown RBP17.74■□□□□ 0.43
SAMM50-203ENST00000474323 FBLN1P23142 703 aa17.74■□□□□ 0.43
SAMM50-203ENST00000474323 PLEKHF1Q96S99 279 aa17.74■□□□□ 0.43
SAMM50-203ENST00000474323 AKAP12Q02952 1782 aa17.74■□□□□ 0.43
SAMM50-203ENST00000474323 RBM33Q96EV2 1170 aaKnown RBP17.74■□□□□ 0.43
SAMM50-203ENST00000474323 ZRANB1Q9UGI0 708 aa17.74■□□□□ 0.43
SAMM50-203ENST00000474323 CHD2O14647 1828 aaKnown RBP17.74■□□□□ 0.43
SAMM50-203ENST00000474323 ACEP12821 1306 aa17.73■□□□□ 0.43
SAMM50-203ENST00000474323 DNTTIP2Q5QJE6 756 aaKnown RBP17.73■□□□□ 0.43
SAMM50-203ENST00000474323 ZNF428Q96B54 188 aa17.73■□□□□ 0.43
SAMM50-203ENST00000474323 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 462.5 ms